BAC Information

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BAC

Clone NameB6Ng01-344I21
Chromosome7 (Build37)
Map Location 77,949,157 - 78,064,890
singlet/doubletdoublet
Overlap genenone
Upstream geneNr2f2, LOC100042833, B130024G19Rik, LOC100042838, LOC665486, LOC100041957
Downstream geneLOC665535
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-344I21.bB6Ng01-344I21.g
ACCGA127010GA127011
length1,1221,055
definitionB6Ng01-344I21.b B6Ng01-344I21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(77,949,157 - 77,950,273)(78,063,834 - 78,064,890)
sequence
gaattcacaatggctctctgaaatagtctgtcctgatttacagatcctca
attttcaatttatgagctgagaccagagtataccaccagaggatgagaat
agagtagtcatattagaggcagctcatatatcctaaagacagactttgga
agaattagaaagtataataaagtgcctgtccctttaagacagaacctggc
tccctgccaatttccaacctaaagcattagatatttttaaagcccttaaa
actgtcacttttcccctggactttttgtcatctctaaatgaaaaaacagt
accagagagatttgcccatattgtttccagtctcctcaggatatttttga
aaagtaaatatttattgctgacaataattttttttttgcgaaggttaact
agcatttcaagtgcaaacccgggcatctgaaaggcagagaaccccccccc
cacccccccaccttcctccctccacacacacacctccagggcacacacaa
acgggaagtttgcaaacaaggccaccggaaattcgaacctttgcaatgtt
ttttaaaaattcattttcagagacgacaggggcaatgatttctggagagt
caggccagaggacattggggactcagaggagtttaaatgtagcctaggga
ccactggaggatcaaagggggagcagctcggagaggctctttctagcctt
cctttgccctcagcatctggaggtgaaatttgacagtatggtaaacacaa
ggacccttacctccttcattgcctcctttccctggggttcctttcctggg
gctggggatgagcaccaactttccagaaacccattgcttcctgctaatca
ccaaaagcattatcatgtccttcagcttgttctaagagacttttaaggct
tcatagtttaagtattttatacacagataagttatgaagaaaaggttggt
tttttttccgtcaggactttaacgcacagcatgcgcctcaaatccgattc
agagaaaatttactagaaacaaatcgtcggacctattttgtttaaatgcc
aatttaaaggttcagcaaaaggaactgggtaaactctttaaggacttata
gctgcgtctgtgatatataaaa
gaattcaatgggacgtgtatccattgacatctttacctttttagtgaaag
agggggaatatgggttttttgtcttcccctattttagaaatgcaattcta
gagtttgtagtatgtaaatgagacagagacagaaatacagttggagacag
gggaaggtgagagacagagggatagtaggaaagaaacagagaggagaaaa
gcagaaggagatgtggaaaaaggagggaaggagagggaagagcagaagaa
aaggaaaggggaataaggagtaaatgtttcttcaacataagatcctttgc
tgtgccctatcaaattgatatttattgtcatttgtttgtttgtttttatg
acatgtgctggagaatccatgcacataagatgtggcctgacactgtgtgg
gctgaaattcaaaactattagagaggcacatttttcaagtgagctctctc
aaccttcaattgatgacatttcttctaatatttggacccaaacctagaga
gttttggcagctaagttattacccttcagaagacaacaaaccggaggacc
tgatatctcctaatagcaagcggtaggctcccatctgttaggaacacaca
gcggacttcaaaggcccattgtcgttttggggggttcttttgaaaactta
aaaggatgcaaataatttcaatatggttaaatatttatttggaaaacatg
ttttctaagactcatttggcacatcattactccaagaccgcaaggaaaca
gggatgccaaagatgcttcctcaggggacagcaacccatgctgggcagca
cccagtgtgcatgccttccttctgaccaccaacttttttcttaagatact
gggatgaattaggcatggtcgtggactctgctcattgctcttatgagaga
gagagagagagagagagagagagagagagagagagagagagatagataga
gagagaactcatattgcttctctttcttccctttgttttgtttcttagaa
aaatcatgttcaccttcatcatgtagctatggccatcagattcaggatgg
gctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_77949157_77950273
seq2: B6Ng01-344I21.b_49_1170

seq1  GAATTCACAATGGCTCTCTGAAATAGTCTGTCCTGATTTACAGATCCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAATGGCTCTCTGAAATAGTCTGTCCTGATTTACAGATCCTCA  50

seq1  ATTTTCAATTTATGAGCTGAGACCAGAGTATACCACCAGAGGATGAGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCAATTTATGAGCTGAGACCAGAGTATACCACCAGAGGATGAGAAT  100

seq1  AGAGTAGTCATATTAGAGGCAGCTCATATATCCTAAAGACAGACTTTGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTAGTCATATTAGAGGCAGCTCATATATCCTAAAGACAGACTTTGGA  150

seq1  AGAATTAGAAAGTATAATAAAGTGCCTGTCCCTTTAAGACAGAACCTGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTAGAAAGTATAATAAAGTGCCTGTCCCTTTAAGACAGAACCTGGC  200

seq1  TCCCTGCCAATTTCCAACCTAAAGCATTAGATATTTTTAAAGCCCTTAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGCCAATTTCCAACCTAAAGCATTAGATATTTTTAAAGCCCTTAAA  250

seq1  ACTGTCACTTTTCCCCTGGACTTTTTGTCATCTCTAAATGAAAAAACAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCACTTTTCCCCTGGACTTTTTGTCATCTCTAAATGAAAAAACAGT  300

seq1  ACCAGAGAGATTTGCCCATATTGTTTCCAGTCTCCTCAGGATATTTTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGAGAGATTTGCCCATATTGTTTCCAGTCTCCTCAGGATATTTTTGA  350

seq1  AAAGTAAATATTTATTGCTGACAATAATTTTTTTTTTGCGAAGGTTAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAAATATTTATTGCTGACAATAATTTTTTTTTTGCGAAGGTTAACT  400

seq1  AGCATTTCAAGTGCAAACCCGGGCATCTGAAAGGCAGAGAACCCCCCCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTTCAAGTGCAAACCCGGGCATCTGAAAGGCAGAGAACCCCCCCCC  450

seq1  CACCCCCCCACCTTCCTCCCTCCACACACACACCTCCAGGGCACACACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCCCCACCTTCCTCCCTCCACACACACACCTCCAGGGCACACACAA  500

seq1  ACGGGAAGTTTGCAAACAAGGCCACCGGAAATTCGAACCTTTGCAATGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGGAAGTTTGCAAACAAGGCCACCGGAAATTCGAACCTTTGCAATGTT  550

seq1  TTTTAAAAATTCATTTTCAGAGACGACAGGGGCAATGATTTCTGGAGAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAAATTCATTTTCAGAGACGACAGGGGCAATGATTTCTGGAGAGT  600

seq1  CAGGCCAGAGGACATTGGGGACTCAGAGGAGTTTAAATGTAGCCTAGGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCAGAGGACATTGGGGACTCAGAGGAGTTTAAATGTAGCCTAGGGA  650

seq1  CCACTGGAGGATCAAAGGGGGAGCAGCTCGGAGAGGCTCTTTCTAGCCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGGAGGATCAAAGGGGGAGCAGCTCGGAGAGGCTCTTTCTAGCCTT  700

seq1  CCTTTGCCCTCAGCATCTGGAGGTG-AATTTGACAGTATGGTAAACACAA  749
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CCTTTGCCCTCAGCATCTGGAGGTGAAATTTGACAGTATGGTAAACACAA  750

seq1  GGACCCTTACCTCCTTCATTGCCTCCTTTCCCTGGGGTTCCTTTCCTGGG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCCTTACCTCCTTCATTGCCTCCTTTCCCTGGGGTTCCTTTCCTGGG  800

seq1  GCTGGGGATGAGCACCAAC-TTCCAGAAA-CCATTGCTTCCTGCTAATCA  847
      ||||||||||||||||||| ||||||||| ||||||||||||||||||||
seq2  GCTGGGGATGAGCACCAACTTTCCAGAAACCCATTGCTTCCTGCTAATCA  850

seq1  CCAAAAGCATTATCATGTCCTTCAGCTTGTTCTAAGAGACTTTTAAGGCT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAAGCATTATCATGTCCTTCAGCTTGTTCTAAGAGACTTTTAAGGCT  900

seq1  TCATAGTTTTAAGTATTTTATACACAGATAAGTTATGAAGAAAAGGTTGG  947
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAG-TTTAAGTATTTTATACACAGATAAGTTATGAAGAAAAGGTTGG  949

seq1  -TTTTTTTCTTTCAAGACTTTAACGCACAGCATGCGCCTCAAATCCGATT  996
       ||||||||  ||| |||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTCCGTCAGGACTTTAACGCACAGCATGCGCCTCAAATCCGATT  999

seq1  CAGAGAAAAATTTACTAAGACACAATCAGTCGACCATATTTTG-TTAAAT  1045
      ||||| |||||||||| ||| ||||   ||||  | ||||||| ||||||
seq2  CAGAG-AAAATTTACT-AGAAACAAATCGTCGGACCTATTTTGTTTAAAT  1047

seq1  GCCAATTTAAAGGTTCAGGGAAAATAGAACT-GGTAAACTCTTTTAGGA-  1093
      |||||||||||||||||  | |||  ||||| |||||||||||| |||| 
seq2  GCCAATTTAAAGGTTCA--GCAAAAGGAACTGGGTAAACTCTTTAAGGAC  1095

seq1  TTATAGCTG---TTGTGATATAAAAAA  1117
      |||||||||    ||||||||| ||||
seq2  TTATAGCTGCGTCTGTGATATATAAAA  1122

seq1: chr7_78063834_78064890
seq2: B6Ng01-344I21.g_63_1117 (reverse)

seq1  AGAGGCCATCCTGAATCTGATGGCCATAGCTACATGATG-AGGTGAACAT  49
      |||| |||||||||||||||||||||||||||||||||| ||||||||||
seq2  AGAGCCCATCCTGAATCTGATGGCCATAGCTACATGATGAAGGTGAACAT  50

seq1  GGTTTTTCTAAAGAAACAAAACAAAAGGGAAGAAAGAGAAAGCAATATGA  99
      | ||||||| |||||||||||| ||||||||||||||| |||||||||||
seq2  GATTTTTCT-AAGAAACAAAAC-AAAGGGAAGAAAGAG-AAGCAATATGA  97

seq1  GTTTCTCTTCTCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  149
      | ||||| |||| | ||| |||||||||||||||||||||||||||||||
seq2  G-TTCTC-TCTC-TATCTATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  144

seq1  CTCTCTCTCTCTCTCTCATAAGAGCAATG-GCAGAGTCCACGACCATGCC  198
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCATAAGAGCAATGAGCAGAGTCCACGACCATGCC  194

seq1  TAATTCATCCCAGTATCTTAAG-AAAAAGTTGGTGGTCAGAAGGAAGGCA  247
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TAATTCATCCCAGTATCTTAAGAAAAAAGTTGGTGGTCAGAAGGAAGGCA  244

seq1  TGCACACTGGGTGCTGCCCAGCATGGGTTGCTGTCCCCTG-GGAAGCATC  296
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TGCACACTGGGTGCTGCCCAGCATGGGTTGCTGTCCCCTGAGGAAGCATC  294

seq1  TTTGGCATCCCTGTTTCCTTGCGGTCTTGGAGTAATGATGTGCCAAATGA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCATCCCTGTTTCCTTGCGGTCTTGGAGTAATGATGTGCCAAATGA  344

seq1  GTCTTAGAAAACATGTTTTCCAAATAAATATTTAACCATATTGAAATTAT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTAGAAAACATGTTTTCCAAATAAATATTTAACCATATTGAAATTAT  394

seq1  TTGCATCCTTTTAAGTTTTCAAAAGAACCCCCCAAAACGACAATGGGCCT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATCCTTTTAAGTTTTCAAAAGAACCCCCCAAAACGACAATGGGCCT  444

seq1  TTGAAGTCCGCTGTGTGTTCCTAACAGATGGGAGCCTACCGCTTGCTATT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGTCCGCTGTGTGTTCCTAACAGATGGGAGCCTACCGCTTGCTATT  494

seq1  AGGAGATATCAGGTCCTCCGGTTTGTTGTCTTCTGAAGGGTAATAACTTA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGATATCAGGTCCTCCGGTTTGTTGTCTTCTGAAGGGTAATAACTTA  544

seq1  GCTGCCAAAACTCTCTAGGTTTGGGTCCAAATATTAGAAGAAATGTCATC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCCAAAACTCTCTAGGTTTGGGTCCAAATATTAGAAGAAATGTCATC  594

seq1  AATTGAAGGTTGAGAGAGCTCACTTGAAAAATGTGCCTCTCTAATAGTTT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGAAGGTTGAGAGAGCTCACTTGAAAAATGTGCCTCTCTAATAGTTT  644

seq1  TGAATTTCAGCCCACACAGTGTCAGGCCACATCTTATGTGCATGGATTCT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTTCAGCCCACACAGTGTCAGGCCACATCTTATGTGCATGGATTCT  694

seq1  CCAGCACATGTCATAAAAACAAACAAACAAATGACAATAAATATCAATTT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCACATGTCATAAAAACAAACAAACAAATGACAATAAATATCAATTT  744

seq1  GATAGGGCACAGCAAAGGATCTTATGTTGAAGAAACATTTACTCCTTATT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGGGCACAGCAAAGGATCTTATGTTGAAGAAACATTTACTCCTTATT  794

seq1  CCCCTTTCCTTTTCTTCTGCTCTTCCCTCTCCTTCCCTCCTTTTTCCACA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTTCCTTTTCTTCTGCTCTTCCCTCTCCTTCCCTCCTTTTTCCACA  844

seq1  TCTCCTTCTGCTTTTCTCCTCTCTGTTTCTTTCCTACTATCCCTCTGTCT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTTCTGCTTTTCTCCTCTCTGTTTCTTTCCTACTATCCCTCTGTCT  894

seq1  CTCACCTTCCCCTGTCTCCAACTGTATTTCTGTCTCTGTCTCATTTACAT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCTTCCCCTGTCTCCAACTGTATTTCTGTCTCTGTCTCATTTACAT  944

seq1  ACTACAAACTCTAGAATTGCATTTCTAAAATAGGGGAAGACAAAAAACCC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACAAACTCTAGAATTGCATTTCTAAAATAGGGGAAGACAAAAAACCC  994

seq1  ATATTCCCCCTCTTTCACTAAAAAGGTAAAGATGTCAATGGATACACGTC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCCCCCTCTTTCACTAAAAAGGTAAAGATGTCAATGGATACACGTC  1044

seq1  CCATTGAATTC  1057
      |||||||||||
seq2  CCATTGAATTC  1055