BAC Information

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BAC

Clone NameB6Ng01-344K01
Chromosome7 (Build37)
Map Location 76,338,976 - 76,468,966
singlet/doubletdoublet
Overlap geneLOC384741
Upstream geneIgf1r, C330024D12Rik, EG434197, LOC100041800, EG384639, Arrdc4
Downstream geneEG665410
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-344K01.bB6Ng01-344K01.g
ACCGA127065GA127066
length1,074717
definitionB6Ng01-344K01.b B6Ng01-344K01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,338,976 - 76,339,962)(76,468,250 - 76,468,966)
sequence
gaattctctattctaatgaagtgcctgggggccagaggacttagccaaca
agcttcccatctcagatatccctccctgcaaaaactatttaatctgaggc
ccaccctgagaaatgaggtgtggttttacacatccattttctgccatgac
aataaactctttagaaccatggactgtctcttttcatcaagatctgctgg
gcagtgagggtggggtggtgagcatgaagccacagagcctgcttccaccc
tgctgtaataagctggtgcaccccttttcccccagctccctgctagacac
tccccttagtcagccggccccaactccattctctgctcttccatgaatcc
cagaggagcctggatttcctagagtctgacaaccctatggcccaggccag
aggacccccaaagccgctttggctaccccacacctaagactgtgctttcc
cacccctgagcagtgtcttggagttcccaaatagcccagcatcagtccag
gcagcagcagcaacatgggataagtgcagtcaaacttcccatcttccccc
tccccaagtggcagggcagactctggcctacaaaatgaaattcatgaata
tcaagtcttgcagtcagtttccagtacctgtcaaagtacctgaggtgaat
gcctacgagataaatattcaatatgtgaaaattcctcgtttgtctgtgct
ccttttggccttagattattttcttcttaaaccttccacagccgtataaa
acacacactcattgaactggaaatcattgtgcttatactcataggttttc
tcatagtgctacaagtttacccgagttgtgactgatacatacatttacca
ccccagccctccaaacacaataaataaaaagaaatgcaataaattacaga
gatctttatgtatccatttatggttggaatttattattagattcttagga
ccaaatctacaaacaatgatgaagagggggcacattgttctatccgtatg
ggatgtcttttagattattaccataggcagccttgaaaggtgcacactga
ggagagaaaggctatgaacaggca

gaattcaaagagatccatttctactaacctacacaaacctcaagtccaag
tggatcaaaaccctcaacataaatccagatacactaaatctgatagagaa
agtggggaacagactgaacatattggcacaggagacaacttcataagtag
aacatcaatagctcctcaatagctttaagatcataaaagatgcctttccc
taaaaaggacaaataagattaaagttgatattttagttgttaattgatcc
caagttttattttatagtagccaaaatgattatttgagtgaattcacact
gatttatttagaatagtataaaatgctttatgtccatgggcacattttca
taagaatgagttatgtataccttcacatgacactgtctgggacattaatc
tatgctagtgacaagccagggaatgcacagaattattctttgagataaag
aaagaaagaccataaaaggtataaaacattcaaaggatttcaatagtgtg
gagatattttgcaaggttttgatatcattatcagatctgctactgaaaca
tgacatgaatttatttgaaaaaaaatggaaactagagggcttgcctatgt
catacataatctgagatgttaaaatttgagaacctttatatgtagaaata
tattctctattgatgagaagagagagatgatgaaagaaaggaaggaaggg
aaggatggatggaggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_76338976_76339962
seq2: B6Ng01-344K01.b_133_1120

seq1  ATTTAATCTGAGGCCCACCCTGAGAAATGAGGTGTGGTTTTACACATCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATCTGAGGCCCACCCTGAGAAATGAGGTGTGGTTTTACACATCCA  50

seq1  TTTTCTGCCATGACAATAAACTCTTTAGAACCATGGACTGTCTCTTTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGCCATGACAATAAACTCTTTAGAACCATGGACTGTCTCTTTTCA  100

seq1  TCAAGATCTGCTGGGCAGTGAGGGTGGGGTGGTGAGCATGAAGCCACAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGATCTGCTGGGCAGTGAGGGTGGGGTGGTGAGCATGAAGCCACAGA  150

seq1  GCCTGCTTCCACCCTGCTGTAATAAGCTGGTGCACCCCTTTTCCCCCAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCTTCCACCCTGCTGTAATAAGCTGGTGCACCCCTTTTCCCCCAGC  200

seq1  TCCCTGCTAGACACTCCCCTTAGTCAGCCGGCCCCAACTCCATTCTCTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGCTAGACACTCCCCTTAGTCAGCCGGCCCCAACTCCATTCTCTGC  250

seq1  TCTTCCATGAATCCCAGAGGAGCCTGGATTTCCTAGAGTCTGACAACCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCATGAATCCCAGAGGAGCCTGGATTTCCTAGAGTCTGACAACCCT  300

seq1  ATGGCCCAGGCCAGAGGACCCCCAAAGCCGCTTTGGCTACCCCACACCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCCAGGCCAGAGGACCCCCAAAGCCGCTTTGGCTACCCCACACCTA  350

seq1  AGACTGTGCTTTCCCACCCCTGAGCAGTGTCTTGGAGTTCCCAAATAGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGTGCTTTCCCACCCCTGAGCAGTGTCTTGGAGTTCCCAAATAGCC  400

seq1  CAGCATCAGTCCAGGCAGCAGCAGCAACATGGGATAAGTGCAGTCAAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATCAGTCCAGGCAGCAGCAGCAACATGGGATAAGTGCAGTCAAACT  450

seq1  TCCCATCTTCCCCCTCCCCAAGTGGCAGGGCAGACTCTGGCCTACAAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATCTTCCCCCTCCCCAAGTGGCAGGGCAGACTCTGGCCTACAAAAT  500

seq1  GAAATTCATGAATATCAAGTCTTGCAGTCAGTTTCCAGTACCTGTCAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTCATGAATATCAAGTCTTGCAGTCAGTTTCCAGTACCTGTCAAAG  550

seq1  TACCTGAGGTGAATGCCTACGAGATAAATATTCAATATGTGAAAATTCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGAGGTGAATGCCTACGAGATAAATATTCAATATGTGAAAATTCCT  600

seq1  CGTTTGTCTGTGCTCCTTTTGGCCTTAGATTATTTTCTTCTTAAACCTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTGTCTGTGCTCCTTTTGGCCTTAGATTATTTTCTTCTTAAACCTTC  650

seq1  CACAGCCGTATAAAACACACACTCATTGAACTGG-AATCATTGTGCTTAT  699
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CACAGCCGTATAAAACACACACTCATTGAACTGGAAATCATTGTGCTTAT  700

seq1  ACTCATAGGTTTTCTCATAAGTGCTACAAGTTTACCCGAGTTGTGACTGA  749
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ACTCATAGGTTTTCTCAT-AGTGCTACAAGTTTACCCGAGTTGTGACTGA  749

seq1  TACATACATTTACCACCCCAGCCCTCCAAACACAATAAATAAAAAGAAAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATACATTTACCACCCCAGCCCTCCAAACACAATAAATAAAAAGAAAT  799

seq1  GCAATAAATTACAGAGATCTTTATGTATCCATTTATGGTTGGAATTTATT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATAAATTACAGAGATCTTTATGTATCCATTTATGGTTGGAATTTATT  849

seq1  ATTAGATTCTTAGGACCAAATCTACAAACAATGATGAAGAGGGGGCACA-  898
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ATTAGATTCTTAGGACCAAATCTACAAACAATGATGAAGAGGGGGCACAT  899

seq1  TGTTCTATCCGTATGGGAATGTCTTTTAGA-TATTACCATAGGGCAGCCT  947
      ||||||||||||||||| |||||||||||| |||||||||| ||||||||
seq2  TGTTCTATCCGTATGGG-ATGTCTTTTAGATTATTACCATA-GGCAGCCT  947

seq1  TG-AAGGTGCACACTGGAGGAGAGAAAGGCTATG-ACAGGCA  987
      || |||||||||||| |||||||||||||||||| |||||||
seq2  TGAAAGGTGCACACT-GAGGAGAGAAAGGCTATGAACAGGCA  988


seq1: chr7_76468250_76468966
seq2: B6Ng01-344K01.g_64_780 (reverse)

seq1  TTCCTCCATCCATCCTTCCCTTCCTTCCTTTCTTTCATCATCTCTCTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCCATCCATCCTTCCCTTCCTTCCTTTCTTTCATCATCTCTCTCTT  50

seq1  CTCATCAATAGAGAATATATTTCTACATATAAAGGTTCTCAAATTTTAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCAATAGAGAATATATTTCTACATATAAAGGTTCTCAAATTTTAAC  100

seq1  ATCTCAGATTATGTATGACATAGGCAAGCCCTCTAGTTTCCATTTTTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAGATTATGTATGACATAGGCAAGCCCTCTAGTTTCCATTTTTTTT  150

seq1  CAAATAAATTCATGTCATGTTTCAGTAGCAGATCTGATAATGATATCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAAATTCATGTCATGTTTCAGTAGCAGATCTGATAATGATATCAAA  200

seq1  ACCTTGCAAAATATCTCCACACTATTGAAATCCTTTGAATGTTTTATACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGCAAAATATCTCCACACTATTGAAATCCTTTGAATGTTTTATACC  250

seq1  TTTTATGGTCTTTCTTTCTTTATCTCAAAGAATAATTCTGTGCATTCCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATGGTCTTTCTTTCTTTATCTCAAAGAATAATTCTGTGCATTCCCT  300

seq1  GGCTTGTCACTAGCATAGATTAATGTCCCAGACAGTGTCATGTGAAGGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGTCACTAGCATAGATTAATGTCCCAGACAGTGTCATGTGAAGGTA  350

seq1  TACATAACTCATTCTTATGAAAATGTGCCCATGGACATAAAGCATTTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAACTCATTCTTATGAAAATGTGCCCATGGACATAAAGCATTTTAT  400

seq1  ACTATTCTAAATAAATCAGTGTGAATTCACTCAAATAATCATTTTGGCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTCTAAATAAATCAGTGTGAATTCACTCAAATAATCATTTTGGCTA  450

seq1  CTATAAAATAAAACTTGGGATCAATTAACAACTAAAATATCAACTTTAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAAAATAAAACTTGGGATCAATTAACAACTAAAATATCAACTTTAAT  500

seq1  CTTATTTGTCCTTTTTAGGGAAAGGCATCTTTTATGATCTTAAAGCTATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTTGTCCTTTTTAGGGAAAGGCATCTTTTATGATCTTAAAGCTATT  550

seq1  GAGGAGCTATTGATGTTCTACTTATGAAGTTGTCTCCTGTGCCAATATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGCTATTGATGTTCTACTTATGAAGTTGTCTCCTGTGCCAATATGT  600

seq1  TCAGTCTGTTCCCCACTTTCTCTATCAGATTTAGTGTATCTGGATTTATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCTGTTCCCCACTTTCTCTATCAGATTTAGTGTATCTGGATTTATG  650

seq1  TTGAGGGTTTTGATCCACTTGGACTTGAGGTTTGTGTAGGTTAGTAGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGGTTTTGATCCACTTGGACTTGAGGTTTGTGTAGGTTAGTAGAAA  700

seq1  TGGATCTCTTTGAATTC  717
      |||||||||||||||||
seq2  TGGATCTCTTTGAATTC  717


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