BAC Information

Click to search

BAC

Clone NameB6Ng01-344K23
Chromosome7 (Build37)
Map Location 7,490,226 - 7,491,043
singlet/doubletsinglet
Overlap geneEG628117
Upstream geneOlfr1350, Zim2, Zim1, Peg3, Usp29, LOC627961, Aurkc, LOC628030, LOC100041822, 5730403M16Rik, 2810409K11Rik, Vmn2r-ps35, Zfp418, BC023179, 6430701C03Rik, Clcn4-2, V2r15, LOC100041866, LOC100042577, Vmn2r31, Vmn2r-ps36, V2r5, LOC100041883
Downstream geneVmn2r33, LOC665470, EG665474, EG628368, LOC100042636, LOC665485, EG625353, Vmn2r-ps40, Vmn2r36, LOC638170, LOC100042662, LOC100041942, LOC100042673, LOC100041949, LOC100042681, LOC100042688, LOC100042695, LOC100041956, LOC100041961
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-344K23.bB6Ng01-344K23.g
ACCGA127107GA127108
length8181,178
definitionB6Ng01-344K23.b B6Ng01-344K23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcagattgaaaggagggacattcttctagcttggattgactcca
gctgtgatggtttcaatgaactcaccctccagaaagtcatagacttgcat
acttgttccttattggtggaacactttagagataataatgatgtatagcc
ttgttggaggaggtgtgtccctgggggtgggcttgtatgtctcaaaagct
ctttccattcccagttaactctctctccctggtactgtactatggatcag
gatgtaagctctcagcaactgttccagtgctgtgtgtgcctgtatccatc
ctccctgacatggaggttacagattgaccctctgaggtgtaagccccaat
aaactccttgttatcataagttgccttggtcatggtgtctcttcacagta
atagaaaagtaattaagccactatgtcaacttaactcatgttgctgagtg
atgagcacagtagtcggagggaacatgaaactggctatcaatagaatagg
ttcacagcctggtatactctgaggtagaaagctaagtgggaatgacttaa
gggtaccaggaatccctgacaaggaggattcatataaattcaactttctc
cattattcaggactgtttatcctttgaggatgtggctgtgtacttctact
gggaggaatggacactgcttgatgactctcaaaggatcctgcaccagacg
ttgatgtcagaaatatgaacactcatgtatttacttgtaagaccctgccc
tgccatcatttcagagcatgtctaggctttcctttgttttttggtttttg
gttttttgttttgttttg
gaattctcacctgaggaataccgaatggctgagaagcacctgaaaaaaat
gttgagcatccttaatcatcagagaaatgcaaatcaaaacaaccctgaga
ttccatctcacaccagtcagaatggctaagatcaaaaattcaggtgacag
cagattctagtgaggatgtggagaaagaggaacactcctccattgttggt
aggattgcaggcttgtacaaccactctggaaatcagtctggtggttcctc
agaaaattggacatggtactaccagaggatcctgcaatacctctcctgag
catatatccagaagatgtcccaaccggtaagtaggacacatgctccacta
tgttcatagcagcgttatttataatagccagaagctggaaagaacccaga
tgcctctcaacagaggcatgtatacagaaaacgtggtatatttacacaat
ggagtactactcagctattaaaaggaatgaatttatgaaattcctaggca
aatcgttagacctggagaacatcatcctgagtgaggtaacacaatcacag
aagaactcaaatgatatgtactcactgataagtgaatattagcctagaaa
cttagtatagcgagatataagatacaatttgcaaaacacatgaaactgaa
gaagaacaaagaccatagtgtggacaatttgccccttcttataattggaa
acaatcacccatggaaggagttacagagacaaagtttggagctgagacaa
aaagatggaccatctagagactgccatatccagtgttccatcccataatt
agcctccaaacgatgacaccattgcatacactagcaagcatttactgaaa
ggacccagatatagctgtttcttgtgagactatgcccagggccctagcaa
acacataaatggatgctcacagtcagctattgggatggatcacagggacc
ctcattggaggagctagaagaaagtatcccaaggatctaaagagatctgc
caacactggtaggtgccaacattatgactaacagtactccgggagcttct
tgactctagctgcatatgtatccaaaagaatgggcctagtcattcatcca
ctgggaatagaaggttccaatgaactcgcatccatttatatggcctccag
tacagggagaatcgtcaggtcctaaaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_7490226_7491043
seq2: B6Ng01-344K23.b_47_864 (reverse)

seq1  CAAAACAAAACAAAAAACCAAAAACCAAAAAACAAAGGAAAGCCTAGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACAAAACAAAAAACCAAAAACCAAAAAACAAAGGAAAGCCTAGACA  50

seq1  TGCTCTGAAATGATGGCAGGGCAGGGTCTTACAAGTAAATACATGAGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTGAAATGATGGCAGGGCAGGGTCTTACAAGTAAATACATGAGTGT  100

seq1  TCATATTTCTGACATCAACGTCTGGTGCAGGATCCTTTGAGAGTCATCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATTTCTGACATCAACGTCTGGTGCAGGATCCTTTGAGAGTCATCAA  150

seq1  GCAGTGTCCATTCCTCCCAGTAGAAGTACACAGCCACATCCTCAAAGGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGTCCATTCCTCCCAGTAGAAGTACACAGCCACATCCTCAAAGGAT  200

seq1  AAACAGTCCTGAATAATGGAGAAAGTTGAATTTATATGAATCCTCCTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGTCCTGAATAATGGAGAAAGTTGAATTTATATGAATCCTCCTTGT  250

seq1  CAGGGATTCCTGGTACCCTTAAGTCATTCCCACTTAGCTTTCTACCTCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGATTCCTGGTACCCTTAAGTCATTCCCACTTAGCTTTCTACCTCAG  300

seq1  AGTATACCAGGCTGTGAACCTATTCTATTGATAGCCAGTTTCATGTTCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATACCAGGCTGTGAACCTATTCTATTGATAGCCAGTTTCATGTTCCC  350

seq1  TCCGACTACTGTGCTCATCACTCAGCAACATGAGTTAAGTTGACATAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGACTACTGTGCTCATCACTCAGCAACATGAGTTAAGTTGACATAGTG  400

seq1  GCTTAATTACTTTTCTATTACTGTGAAGAGACACCATGACCAAGGCAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAATTACTTTTCTATTACTGTGAAGAGACACCATGACCAAGGCAACT  450

seq1  TATGATAACAAGGAGTTTATTGGGGCTTACACCTCAGAGGGTCAATCTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATAACAAGGAGTTTATTGGGGCTTACACCTCAGAGGGTCAATCTGT  500

seq1  AACCTCCATGTCAGGGAGGATGGATACAGGCACACACAGCACTGGAACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTCCATGTCAGGGAGGATGGATACAGGCACACACAGCACTGGAACAG  550

seq1  TTGCTGAGAGCTTACATCCTGATCCATAGTACAGTACCAGGGAGAGAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGAGAGCTTACATCCTGATCCATAGTACAGTACCAGGGAGAGAGAG  600

seq1  TTAACTGGGAATGGAAAGAGCTTTTGAGACATACAAGCCCACCCCCAGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTGGGAATGGAAAGAGCTTTTGAGACATACAAGCCCACCCCCAGGG  650

seq1  ACACACCTCCTCCAACAAGGCTATACATCATTATTATCTCTAAAGTGTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACCTCCTCCAACAAGGCTATACATCATTATTATCTCTAAAGTGTTC  700

seq1  CACCAATAAGGAACAAGTATGCAAGTCTATGACTTTCTGGAGGGTGAGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAATAAGGAACAAGTATGCAAGTCTATGACTTTCTGGAGGGTGAGTT  750

seq1  CATTGAAACCATCACAGCTGGAGTCAATCCAAGCTAGAAGAATGTCCCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGAAACCATCACAGCTGGAGTCAATCCAAGCTAGAAGAATGTCCCTC  800

seq1  CTTTCAATCTGAGAATTC  818
      ||||||||||||||||||
seq2  CTTTCAATCTGAGAATTC  818