BAC Information

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BAC

Clone NameB6Ng01-345F19
Chromosome7 (Build37)
Map Location 90,325,124 - 90,326,263
singlet/doubletsinglet
Overlap geneA530021J07Rik
Upstream geneSh3gl3, Adamtsl3, 1700129I04Rik, Eftud1, LOC100038986, LOC619808, Rkhd3, LOC619909
Downstream geneEG666160, Tmc3, Stard5, Il16, Phgdh-ps1, LOC666170, 1700026D08Rik, Mesdc1, Mesdc2, 9930013L23Rik, 2210412D01Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-345F19.bB6Ng01-345F19.g
ACCGA127582GA127583
length9321,138
definitionB6Ng01-345F19.b B6Ng01-345F19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagtaagaaggttatctattcagtaacattcaaatttacttctag
ttgagaaggtgaaactaattaggcattacaaagaacagagccagaatagc
tcagggctggtctgcagagtgtttacttgagacaatagtcaggcgtgatg
gcacacacctttaatcccagcactcgggaggcagaagcaggtggatttct
gagttcgaggccagcatgatctacaaagtgagttccaggacagccagggc
tatacagagaaaccctgtcttgaaaaacaaacaaacaaacaaacaaacaa
acaaacaaacaagacaatagccaggcttacccagacaagggaattcacaa
tggccttgcgaataggtgggtttaccatgaaagagttagggaatccccct
gagacaggtttcttcactaggcccaaagaaacagcacaaatcaggcattt
actaagaacccctggtggtgggcttaacaatagactagcattacacctgg
ctcccttagtggtagcagcctggtcgctgccttcttttgatgtatacatt
ccttttgtattgtgtcactgtaactcagtggatgtatctcacctggtttc
ttgtcactcttctatataaaaagtatgatgctcgacttgaaaaattacat
tcagattctgtctgtcattcattcaccaactccttgtccacctgcaacca
gggaccaaaagggtctgcggcatctgtggagaactttcttgattgctaat
taatgtaggaatcaccagcccactgtgggaggcaccattacctaggcagg
gtcttctaaacagtataaaaaagagagttagctgagagcaggtagggaag
tatatatttattctctcaatgcttttaattgtgatcataatacataaagt
tcctgccttaacctcccccaaataatggacta

gaattcaggacacagctcccaccactaatggtaggggaataggaaaaggt
tgggattatctatgagagaattctcagacttctgtgaagagtatgctgct
gagccaagacccatccaccctcagtgtagtgatgggaatggggtaggctt
ggacaggagtgggactggcctcccaatacagtagcttctactctgaccac
ctgttcagctgtagtggggagggaagacactgtcagaacttctcttatgg
ttgtagggtatagaaaaaaaaccacaggatacccagttaaacttaaaatt
ttaactcagttatagatgatgtttttagaataaatctactccatgcaatg
tttgagatgtacagacactaagactagtatttgatgctgatctaaaagtt
tacagtggcctggatgttcttctattttatctgtcaactctcttctcatt
ttctctctcactagaacaacccagtagcagttggcagaacaaaaatgtgg
ctttcagagttctgccgatgaccctgagcaccaggcacatgaacttggag
atgagagacatcgtaacacatcacaaaatggattttgttacctctccccc
ccacacctcctccaggatcttttattaatagatattttttagagatttat
cttattttcaattatgtgcacgtgtatgtgtctgtcttgagatatgtgca
tatgagtgtaagtactcatggatgccagaagagaaaggtctatcccctgg
agctgggctcagaggcagttgagagcctcctaacatggctgctggacact
gaacttaggtcgtcagtatgtgctcttctcgctctctctttctctccatc
ccctgccaatgattattttacttgattacgctgctcgtagaaaaagagat
gctagtgcggacttttccagaagtcttttagaaattgctaggtggtacag
gaaacaacttgaacactgcacatgggcctcatctggaggtccttctttcc
aggctcagtttgtccagtgttttccaaacatctcaattccttgccttact
agaggagtcctgaggaaagtgacagtgctatggctgggagcctgaatacc
agcatagcctaaggttgagtctggtcacttcctgagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_90325124_90326263
seq2: B6Ng01-345F19.g_66_1203

seq1  GAATTCAGGACACAGCTCCCACCACTAATGGTAGGGGAATAGGAAAAGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGACACAGCTCCCACCACTAATGGTAGGGGAATAGGAAAAGGT  50

seq1  TGGGATTATCTATGAGAGAATTCTCAGACTTCTGTGAAGAGTATGCTGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATTATCTATGAGAGAATTCTCAGACTTCTGTGAAGAGTATGCTGCT  100

seq1  GAGCCAAGACCCATCCACCCTCAGTGTAGTGATGGGAATGGGGTAGGCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCAAGACCCATCCACCCTCAGTGTAGTGATGGGAATGGGGTAGGCTT  150

seq1  GGACAGGAGTGGGACTGGCCTCCCAATACAGTAGCTTCTACTCTGACCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGGAGTGGGACTGGCCTCCCAATACAGTAGCTTCTACTCTGACCAC  200

seq1  CTGTTCAGCTGTAGTGGGGAGGGAAGACACTGTCAGAACTTCTCTTATGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCAGCTGTAGTGGGGAGGGAAGACACTGTCAGAACTTCTCTTATGG  250

seq1  TTGTAGGGTATAGAAAAAAAACCACAGGATACCCAGTTAAACTTAAAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGGGTATAGAAAAAAAACCACAGGATACCCAGTTAAACTTAAAATT  300

seq1  TTAACTCAGTTATAGATGATGTTTTTAGAATAAATCTACTCCATGCAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTCAGTTATAGATGATGTTTTTAGAATAAATCTACTCCATGCAATG  350

seq1  TTTGAGATGTACAGACACTAAGACTAGTATTTGATGCTGATCTAAAAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGATGTACAGACACTAAGACTAGTATTTGATGCTGATCTAAAAGTT  400

seq1  TACAGTGGCCTGGATGTTCTTCTATTTTATCTGTCAACTCTCTTCTCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTGGCCTGGATGTTCTTCTATTTTATCTGTCAACTCTCTTCTCATT  450

seq1  TTCTCTCTCACTAGAACAACCCAGTAGCAGTTGGCAGAACAAAAATGTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCTCACTAGAACAACCCAGTAGCAGTTGGCAGAACAAAAATGTGG  500

seq1  CTTTCAGAGTTCTGCCGATGACCCTGAGCACCAGGCACATGAACTTGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAGAGTTCTGCCGATGACCCTGAGCACCAGGCACATGAACTTGGAG  550

seq1  ATGAGAGACATCGTAACACATCACAAAATGGATTTTGTTACCTCTCCCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAGACATCGTAACACATCACAAAATGGATTTTGTTACCTCTCCCCC  600

seq1  CCACACCTCCTCCAGGATCTTTTATTAATAGATATTTTTTAGAGATTTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACCTCCTCCAGGATCTTTTATTAATAGATATTTTTTAGAGATTTAT  650

seq1  CTTATTTTCAATTATGTGCACGTGTATGTGTCTGTCTTGAGATATGTGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTTTCAATTATGTGCACGTGTATGTGTCTGTCTTGAGATATGTGCA  700

seq1  TATGAGTGTAAGTACTCATGGATGCCAGAAGAGAAAGGTCTATCCCCTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGTGTAAGTACTCATGGATGCCAGAAGAGAAAGGTCTATCCCCTGG  750

seq1  AGCTGGGCTCAGAGGCAGTTGAGAGCCTCCTAACATGGCTGCTGGACACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGGCTCAGAGGCAGTTGAGAGCCTCCTAACATGGCTGCTGGACACT  800

seq1  GAACTTAGGTCGTCAGTATGTGCTCTTCTCGCTCTCTCTTTCTCTCCATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTAGGTCGTCAGTATGTGCTCTTCTCGCTCTCTCTTTCTCTCCATC  850

seq1  CCCTGCCAATGATTA-TTTACTTGATTACGCTGCTCGTAGAAAAAGAGAT  899
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CCCTGCCAATGATTATTTTACTTGATTACGCTGCTCGTAGAAAAAGAGAT  900

seq1  GCTAGTGCGGAC-TTTCCAGAAGTC-TTTAGAAATTGCTAGGTGGTACAG  947
      |||||||||||| |||||||||||| ||||||||||||||||||||||||
seq2  GCTAGTGCGGACTTTTCCAGAAGTCTTTTAGAAATTGCTAGGTGGTACAG  950

seq1  GAAAAACAAC-TGAACACTGCACAT-GGCCTCATCTTGGAGTCCT--CTT  993
      |  ||||||| |||||||||||||| |||||||||| |  |||||   ||
seq2  G--AAACAACTTGAACACTGCACATGGGCCTCATCTGGAGGTCCTTCTTT  998

seq1  CCAGGCTCAGTTTTTGTCCAGTG-TTTCCAAACATCTC-ATCCCTGGCCT  1041
      ||||||||||  ||||||||||| |||||||||||||| || ||| ||||
seq2  CCAGGCTCAG--TTTGTCCAGTGTTTTCCAAACATCTCAATTCCTTGCCT  1046

seq1  ACTTAGAGAAGTTCTGAGGAAAGTGGCAGTGGCTAT-GCT-GGAGCTGGG  1089
         ||||| ||| |||||||||||| |||| ||||| ||| |||||  | 
seq2  TACTAGAGGAGTCCTGAGGAAAGTGACAGT-GCTATGGCTGGGAGCCTGA  1095

seq1  ATAACCACAGCATAGGCTAAAGGTCTGGAGGTCCTGGTCACTTCCTGAGT  1139
      |||    |||||||| |||| |   | |||   |||||||||||||||||
seq2  ATA---CCAGCATAGCCTAAGG---TTGAG--TCTGGTCACTTCCTGAGT  1137

seq1  G  1140
      |
seq2  G  1138


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