BAC Information

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BAC

Clone NameB6Ng01-345O07
Chromosome7 (Build37)
Map Location 85,606,217 - 85,607,387
singlet/doubletsinglet
Overlap geneNtrk3
Upstream geneA330068G13Rik
Downstream geneMrpl46, Mrps11, Det1, Isg20l1, Isg20, Acan, Hapln3, Mfge8, Abhd2, Rlbp1, BC025462, Polg
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-345O07.bB6Ng01-345O07.g
ACCGA127947GA127948
length1,1201,160
definitionB6Ng01-345O07.b B6Ng01-345O07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcccttcctcactggagaagcaggagaagccactgtgtagctgcag
ttcgggaggcttcattggctccaaatgatgataaagaatggagttctgtc
tgcatttggagcctttcaggttagagcacatctctgtgatgtttgcctcc
catgattctctcagaggaatcctggagtccttggccaacccaaatgacca
ttccctctccattcccaagcgtgtccaacccaggctgttggggtctggaa
gcttctcctgactaagcagatctctggtcttccttctgctcacttggaca
cttcccatctctccagtctcaccttcaagaatctctttgttcattaacaa
caatggatttatgaaattcttggacaaatggaagtacctggaggtactta
gtgaggtaacccaatcacaaaagaagccacttgctatgcactcactgata
agtggatattagcccagaaacttagaacacccaagatacaatgtgcaaaa
cacaagaaaatcaagaagagggaagaccaattggtggatacatcattcct
ccttagaatagggaagaaaatacccatgtaaggcgttacagagacaaagt
ttggagctaagacaaaaggatggactatccagaaattaccccacccgggg
tatccatcctacaatcagccaccaaacccagacactattgcacaatgcca
gaaagattttgctgaagggaccctgttatagctgtcttgtatgaggctat
gctagtgcctggcaaatacagaagtggatgctcacagtcatctataagat
ggaacacagggcccccaatggagaagctagagaaagcaaccaaggagctg
aaggggtctgcaaccctataggtggaacaacaatatgaactaaccagtac
ccccagagcttgtatctctagctgcatatgtagcagagatggccctagtt
gggccatcactgggaagagatgcccctttggtattgcaaactttatatgc
tccagtacagggggagcatcaggtccaagcggggagtgggtgagtaggga
gcagaatggaaggagggctatgcaacctttctcgggataccattgtaaat
cgtcatttcatgatcattgc
gaattcaggtaaacctcaatttaatattggatggtaaatggtaaaactgg
gtgatttttttaaaaaacaggaaaccaatgcacagaaggttgagcaccac
aacaaagatcaaaatgaccagaaatttacatctccacagaatctgggtct
atacatttcttcccagaggaacatgatcacaatctctccctcttccttat
aattaagggatattcattccttaactcttgatgggcctggttataggata
cctacctggtgggtgttgatggactgcagcccagtgactatccagtccac
atcaggcaaaggagagccagagccattgcaagtgatcacggcattgtctc
cttctcggacagtcaggttgacgtggctcacactgatctctgggagatct
aggaggacagagtgggataaggagatgaaatgtcaggtgacagtccacag
aggagctctgcctccaggcagacagtggtgcttcttgccttgcccagaga
caacgctggcacagctgacacaacttccctgagcttgtgcaagactcttg
tgatggttagtatgaatttgacaagctcaaaaatcacctagaaactcttc
taagcgtgcctaagagaatagatcaaccaaagtgggcagacaccattcta
tgggctagggtctgactaaacagaaagaaggagctgagctgagcagcgac
gctcatccttctctctggtcctgacttggggtacagagtagccaactgcc
tcaaactgccctcctgcagctatgccttcctcatcatagtgggccgtact
ctcaaaatgtgggccaaaagaaattctcctgtcttttaatcgctcgtgtc
agatcaatgtgaaaagtactaactataaccccacccccagctgattgaca
gctctcactccagagactgcagaacccaagaactgaagtacatacaatgg
gatgctcctacaaagcaggtctaagtggtgcacccccttccatggatgca
ttctagcaacacacctgtagctcactgtctacatatgtgtgtgtctggtc
cacttgacctagaatacattctctaggtctctggtgggccatagagccat
gttctagaaatcccttcgaagctccaaattagtaagtctgagagttgccg
cattaaaacg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_85606217_85607387
seq2: B6Ng01-345O07.g_64_1223

seq1  GAATTCAGGTAAACCTCAATTTAATATTGGATGGTAAATGGTAAAACTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTAAACCTCAATTTAATATTGGATGGTAAATGGTAAAACTGG  50

seq1  GTGATTTTTTTAAAAAACAGGAAACCAATGCACAGAAGGTTGAGCACCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTTTTTTAAAAAACAGGAAACCAATGCACAGAAGGTTGAGCACCAC  100

seq1  AACAAAGATCAAAATGACCAGAAATTTACATCTCCACAGAATCTGGGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAGATCAAAATGACCAGAAATTTACATCTCCACAGAATCTGGGTCT  150

seq1  ATACATTTCTTCCCAGAGGAACATGATCACAATCTCTCCCTCTTCCTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATTTCTTCCCAGAGGAACATGATCACAATCTCTCCCTCTTCCTTAT  200

seq1  AATTAAGGGATATTCATTCCTTAACTCTTGATGGGCCTGGTTATAGGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAGGGATATTCATTCCTTAACTCTTGATGGGCCTGGTTATAGGATA  250

seq1  CCTACCTGGTGGGTGTTGATGGACTGCAGCCCAGTGACTATCCAGTCCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACCTGGTGGGTGTTGATGGACTGCAGCCCAGTGACTATCCAGTCCAC  300

seq1  ATCAGGCAAAGGAGAGCCAGAGCCATTGCAAGTGATCACGGCATTGTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGCAAAGGAGAGCCAGAGCCATTGCAAGTGATCACGGCATTGTCTC  350

seq1  CTTCTCGGACAGTCAGGTTGACGTGGCTCACACTGATCTCTGGGAGATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCGGACAGTCAGGTTGACGTGGCTCACACTGATCTCTGGGAGATCT  400

seq1  AGGAGGACAGAGTGGGATAAGGAGATGAAATGTCAGGTGACAGTCCACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGACAGAGTGGGATAAGGAGATGAAATGTCAGGTGACAGTCCACAG  450

seq1  AGGAGCTCTGCCTCCAGGCAGACAGTGGTGCTTCTTGCCTTGCCCAGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCTCTGCCTCCAGGCAGACAGTGGTGCTTCTTGCCTTGCCCAGAGA  500

seq1  CAACGCTGGCACAGCTGACACAACTTCCCTGAGCTTGTGCAAGACTCTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACGCTGGCACAGCTGACACAACTTCCCTGAGCTTGTGCAAGACTCTTG  550

seq1  TGATGGTTAGTATGAATTTGACAAGCTCAAAAATCACCTAGAAACTCTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGTTAGTATGAATTTGACAAGCTCAAAAATCACCTAGAAACTCTTC  600

seq1  TAAGCGTGCCTAAGAGAATAGATCAACCAAAGTGGGCAGACACCATTCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCGTGCCTAAGAGAATAGATCAACCAAAGTGGGCAGACACCATTCTA  650

seq1  TGGGCTAGGGTCTGACTAAACAGAAAGAAGGAGCTGAGCTGAGCAGCGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTAGGGTCTGACTAAACAGAAAGAAGGAGCTGAGCTGAGCAGCGAC  700

seq1  GCTCATCCTTCTCTCTGGTCCTGACTTGGGGTACAGAGTAGCCAACTGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATCCTTCTCTCTGGTCCTGACTTGGGGTACAGAGTAGCCAACTGCC  750

seq1  TCAAACTGCCCTCCTGCAGCTATGCCTTCCTCATCATAGTGGGCCGTACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACTGCCCTCCTGCAGCTATGCCTTCCTCATCATAGTGGGCCGTACT  800

seq1  CTCAAAATGTGGGCCAAAAGAAATTCTCCTGTCTTTTAATCGCTCGTGTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAATGTGGGCCAAAAGAAATTCTCCTGTCTTTTAATCGCTCGTGTC  850

seq1  AGATCAATGTGAAAAGTACTAACTATAACCCCACCCCCAGCTGATTGACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAATGTGAAAAGTACTAACTATAACCCCACCCCCAGCTGATTGACA  900

seq1  GCTCTCACTCCAGAGACTGCAGAA-CCAAGAACTGAAGTACATACAATGG  949
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GCTCTCACTCCAGAGACTGCAGAACCCAAGAACTGAAGTACATACAATGG  950

seq1  GATGCTCCTACAAAGCAGGGTCTAAGTGGTGCACCCC--TCCATGGAATG  997
      ||||||||||||||||| |||||||||||||||||||  ||||||||   
seq2  GATGCTCCTACAAAGCA-GGTCTAAGTGGTGCACCCCCTTCCATGGA--T  997

seq1  GCATTCTAGCAACCACACCTGTAGCTTCAACTGTCTTACATATTGGTGTG  1047
      |||||||||||| |||||||||||||   |||||| |||||||  |||||
seq2  GCATTCTAGCAA-CACACCTGTAGCT--CACTGTC-TACATAT--GTGTG  1041

seq1  TGTCTGGTTCCCACTGGAACTAGGGATTACATTCTCTA-GTCTCTGGTTG  1096
      ||||||||  ||||| || |||  || ||||||||||| ||||||||| |
seq2  TGTCTGGT--CCACTTGACCTA--GAATACATTCTCTAGGTCTCTGGTGG  1087

seq1  GGCATAGAAGCAATGTTCTAGAAAACACCTCAGAAGCTCCCAATATAGTA  1146
      | ||||| ||| |||||||||||| | |||  |||||||| ||| |||||
seq2  GCCATAG-AGCCATGTTCTAGAAATC-CCTTCGAAGCTCCAAAT-TAGTA  1134

seq1  AGTCT-AGAGGTTGCACATTAAAACG  1171
      ||||| |||| |  | ||||||||||
seq2  AGTCTGAGAGTTGCCGCATTAAAACG  1160