BAC Information

Click to search

BAC

Clone NameB6Ng01-346I22
Chromosome7 (Build37)
Map Location 92,382,407 - 92,383,563
singlet/doubletsinglet
Overlap geneEG620697
Upstream geneArnt2, LOC100039239, Fah, Zfand6, 2610206C17Rik, EG620480, Olfr291, LOC666276, Olfr290, ENSMUSG00000070600, F830104D24Rik, LOC620641, EG620672, Vmn2r-ps68
Downstream geneVmn2r-ps69, LOC330581, LOC100039339, Vmn2r70, Vmn2r-ps72, EG233445, Vmn2r-ps74, EG244114, EG620928, EG546980, LOC666382, LOC637652, LOC637667, EG666418, LOC100039471, EG546981, Vmn2r-ps86, Vmn2r76
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-346I22.bB6Ng01-346I22.g
ACCGA128422GA128423
length1,2021,147
definitionB6Ng01-346I22.b B6Ng01-346I22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaaatagatttgaccagaaaggagattcctcccaacacataata
atcagaacaccaaatgcacaaaacaaagaaagagtgttaaaagcattaaa
ggaaaaccaccaagtaacatataaaggcagatctattagaattataccag
aattcttgccatagatgttgaaaaccagaagatcctggacagatgtcaca
cagaccataaaggaacacacatgtcagcccaggctattattcccagcaaa
actgtcaattaccatagatggacaaaccaaagtattcaatgacaaaacta
aacttacacaatacccttccacaaatacagcccttcaaaggataataaag
ggaaaactctaacacagggagggaaagtaagatttagaaaaatcaaaaaa
gtaatcttttaaaaaatctaaaagaagatacccattgaacagaattccaa
cactaacaacaataataacaggaagcaagtataacttttcattaatatgt
cttaatatcagtggactcaactgctcaataaaagacatatactatgagac
atgttacattaagaggacccaacattttgctgcatacataaaatgtacct
caatgacaaaaacagtcagtataagaacagagactaaaaggatggaaaac
aattttccaagcaaattctaagaaacaagcaagagtatctattataatat
caaataaaattgactttcaacctaaagttatcaaaaagataaggaggggc
acttcatactgatcaaatgtaaaatccaccaagacaaactcatttctgaa
catttatgctccatttgaaagggcatccacattcatgaaggaaaccttat
gaaacctcaaagcacaaattgcacagcacgtaatagtagtgtaatgcttc
aataccccacactcatcagaagacagatcatggaaacagaaactaaatgg
aagttatgaaaccaaaggatttttcagatctgtatagagcattttatcct
aaacaaaaggagatacattttttctcagcactcatggtacttcttcaaat
ggaacatacttttttgtcacagacagctcacaatacaggagatgaaatat
gcatgcatcctatcgatatcaagaacttagtgaatgttcatacacttaat
atggaaggaacatatattgttggagccatggatggcctcagagtgggaaa
tc
gaattccatggtcatcatttgtaatcatcgctcctatccagttccatctg
aaatgaaccattagggaaaccatcgctagtggtagagatgtgtccttggg
agatatctggtaaagatgaggaaattgttcattgtcattcaaagaaagat
gaaaatgaccgcagtaaagctgaaaaatacagaacataggcaatgatgta
gagtgtgtttgacctgagggtattcattctagaatatgtttatttttcat
ctcagtattacaattgtatccaacttcttttgtttctctaaacaataaaa
gtatactgagtcttctgatataacatttcacaatgctgctgcctcccata
cccatttatgataaagttggtttttttttgccacaaaatgtatctatgta
tttatgcttggtagatcataataaacataagccatttatctgccttttta
actgccttcatactgagaaagactctttgttgtgagaaagtatttcctta
taattaatccaccttgacttacctcaggaatgctatacatgaacatgagt
ggtcctagtcttgtagttactgcccatattggagctgtaaatataattaa
atatcttctttcatctgtgcagtagtaattaggaataaattcctttcttt
gcaaagccaaacctgttttttcaccatctttttgtaggaaacattcaata
ttagctaccatagaaatgttaggtaaaatatggatgttcatatttatttc
atccaaggcaagataaacagagaaaatcaaatggttggtcttgggtgtca
ccctgaaaacagagcagtagagaataaaatttctaaaactgtacaagcaa
gagccagaaaaattctggcagagagagaggaaatcaacagaaaaatctga
cagttatgtactggttttaactgacagaaaagggaatatagcataggttt
acattaaattctctaaattcctaaaaataaatttctgtggtttatacagc
ctatgacacaattataaggctatcacagcttcttctcatgttcataatga
tgacatagttattttttagatatatctgagaaaatgatcacgttgtactt
tctcctataattcatgttctctaacttgatggatgttactcagaaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_92382407_92383563
seq2: B6Ng01-346I22.g_70_1216

seq1  GAATTCCATGGTCATCATTTGTAATCATCGCTCCTATCCAGTTCCATCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGGTCATCATTTGTAATCATCGCTCCTATCCAGTTCCATCTG  50

seq1  AAATGAACCATTAGGGAAACCATCGCTAGTGGTAGAGATGTGTCCTTGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAACCATTAGGGAAACCATCGCTAGTGGTAGAGATGTGTCCTTGGG  100

seq1  AGATATCTGGTAAAGATGAGGAAATTGTTCATTGTCATTCAAAGAAAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATCTGGTAAAGATGAGGAAATTGTTCATTGTCATTCAAAGAAAGAT  150

seq1  GAAAATGACCGCAGTAAAGCTGAAAAATACAGAACATAGGCAATGATGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATGACCGCAGTAAAGCTGAAAAATACAGAACATAGGCAATGATGTA  200

seq1  GAGTGTGTTTGACCTGAGGGTATTCATTCTAGAATATGTTTATTTTTCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTGTTTGACCTGAGGGTATTCATTCTAGAATATGTTTATTTTTCAT  250

seq1  CTCAGTATTACAATTGTATCCAACTTCTTTTGTTTCTCTAAACAATAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTATTACAATTGTATCCAACTTCTTTTGTTTCTCTAAACAATAAAA  300

seq1  GTATACTGAGTCTTCTGATATAACATTTCACAATGCTGCTGCCTCCCATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATACTGAGTCTTCTGATATAACATTTCACAATGCTGCTGCCTCCCATA  350

seq1  CCCATTTATGATAAAGTTGGTTTTTTTTTGCCACAAAATGTATCTATGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTTATGATAAAGTTGGTTTTTTTTTGCCACAAAATGTATCTATGTA  400

seq1  TTTATGCTTGGTAGATCATAATAAACATAAGCCATTTATCTGCCTTTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGCTTGGTAGATCATAATAAACATAAGCCATTTATCTGCCTTTTTA  450

seq1  ACTGCCTTCATACTGAGAAAGACTCTTTGTTGTGAGAAAGTATTTCCTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCTTCATACTGAGAAAGACTCTTTGTTGTGAGAAAGTATTTCCTTA  500

seq1  TAATTAATCCACCTTGACTTACCTCAGGAATGCTATACATGAACATGAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAATCCACCTTGACTTACCTCAGGAATGCTATACATGAACATGAGT  550

seq1  GGTCCTAGTCTTGTAGTTACTGCCCATATTGGAGCTGTAAATATAATTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTAGTCTTGTAGTTACTGCCCATATTGGAGCTGTAAATATAATTAA  600

seq1  ATATCTTCTTTCATCTGTGCAGTAGTAATTAGGAATAAATTCCTTTCTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTTCTTTCATCTGTGCAGTAGTAATTAGGAATAAATTCCTTTCTTT  650

seq1  GCAAAGCCAAACCTGTTTTTTCACCATCTTTTTGTAGGAAACATTCAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGCCAAACCTGTTTTTTCACCATCTTTTTGTAGGAAACATTCAATA  700

seq1  TTAGCTACCATAGAAATGTTAGGTAAAATATGGATGTTCATATTTATTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTACCATAGAAATGTTAGGTAAAATATGGATGTTCATATTTATTTC  750

seq1  ATCCAAGGCAAGATAAACAGAGAAAATCAAATGGTTGGTCTTGGGTGTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAAGGCAAGATAAACAGAGAAAATCAAATGGTTGGTCTTGGGTGTCA  800

seq1  CCCTGAAAACAGAGCAGTAGAGAATAAAATTTCTAAAACTGTACAAGCAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGAAAACAGAGCAGTAGAGAATAAAATTTCTAAAACTGTACAAGCAA  850

seq1  GAGCCAGAAAAATTCTGGCAGAGAGAGAGGAAATCAACAGAAAAATCTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCAGAAAAATTCTGGCAGAGAGAGAGGAAATCAACAGAAAAATCTGA  900

seq1  CAGTTATGTACTGGTTTTAACTGACAGAAAAGGGAATATAGCATAGGTTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTATGTACTGGTTTTAACTGACAGAAAAGGGAATATAGCATAGGTTT  950

seq1  ACATTAAATTCTCTAAATTCCTAAAAATAAATTTCTGTTGGTTTATACAG  1000
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ACATTAAATTCTCTAAATTCCTAAAAATAAATTTCTG-TGGTTTATACAG  999

seq1  CCTATGAACACAAATTATAAGGCTATCACCAGCCTTCTTCTCCATGTTCA  1050
      |||||| |||| |||||||||||||||| ||| |||||||| ||||||||
seq2  CCTATG-ACAC-AATTATAAGGCTATCA-CAG-CTTCTTCT-CATGTTCA  1044

seq1  TAATGATGACATAGGTTATTTTTAGATATAATCTGAAGAAAAATGATCAC  1100
      |||||||||||||| |  ||||||||||| ||||||   |||||||||||
seq2  TAATGATGACATAGTTATTTTTTAGATAT-ATCTGA--GAAAATGATCAC  1091

seq1  GTTGTACTTTCTCCTATAATCCATGTTTCTCTAACTTTAATGATGTTACT  1150
      |||||||||||||||||||| |||| ||||||||||| |  |||||||||
seq2  GTTGTACTTTCTCCTATAATTCATG-TTCTCTAACTTGATGGATGTTACT  1140

seq1  CAGAAAT  1157
      |||||||
seq2  CAGAAAT  1147