BAC Information

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BAC

Clone NameB6Ng01-346O02
Chromosome7 (Build37)
Map Location 83,184,663 - 83,264,117
singlet/doubletdoublet
Overlap genenone
Upstream geneSv2b, 1500012K07Rik, LOC100042171, Akap13, Klhl25, LOC100042210
Downstream geneLOC434200, EG244071
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-346O02.bB6Ng01-346O02.g
ACCGA128654GA128655
length1,0841,171
definitionB6Ng01-346O02.b B6Ng01-346O02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(83,263,034 - 83,264,117)(83,184,663 - 83,185,814)
sequence
gaattcaggactacaagtccaggcatgcatggcactacccacaatagcct
ggaccatccccccaccccccacccctaacccccaacattgatcactgact
gagaaaaaggccttatagctggatctcatggaagtatctcctcaactgag
gctcctttctctctgatgactcctttctctctggcctttgtacataaaca
tgcatatacaccaaatgttcacatgcacacgcgtgtgtgagcgcacacag
acacacacgcgcacacatgcaaatgcacgtgcacatacatgcacaaagat
ttttttcatgaattatgcaaaaaattctttgaaatgtctgagaaagcaag
agtcctttctacgtgaaacactggtaaaattaccccccatgacaaaagct
ttctttacactcttaaaggaataatcccattgccaaaattactcttcgga
aaatcaagtttaaactttccgactgatacttgaagttaaaactcaagaga
agtaggggtggcctcctgtccaaaagcatatctctccctgccacttttgc
ttttcccttaaaaatgctctccacagtcaattatgatagtgatgagtcta
ataagtggcacctgttccttcactcaatagacttcgatcacaaagggcga
agaaccagaactgttctgagtacagttcgtgagacaggccatgctgttcc
atgggcactcaacccaccaggacataacacaagcgagtatctggagatgg
cacctgcaggaacaagaaaaacacagcctacataacagtgtaactcagat
ggcccacagcggcctttctgaaagggagatttaaggtgagtcacataaga
aaccaacctcatgccagtccaatagcaatgcacagcaagtaaaggaaata
cagaaagcaaaggctcaagaagcagacaagcctggtgatgtgagcaacat
tgagagcaagaggatgggttagaaagagatgctgcgaatgagattttaga
ggagacgggtgaggatattacaggggaaaggaaagacttgttgctcttat
ttttgagtgggaaaggatacctattaggaagggg

gaattccttatgttgtggtgaccccccaaccataacattatttttattct
aacttcataactgtgtatcctatattcagaattccagtacattggccttg
aagatcagtgcagggtccatcctttgactctagtgtacccagggccactg
agaaattggggatctggttctagttatctctgagatcatttcaggtatgg
agtcatgattttagctttcagatgacattacagggcctggagtctgtact
gccatggttcaatggttccgttggacctgtggatctaattacagtcccca
gagagtagacagacgtcattgggtctgaagtctgttatgaattgtaatgt
aaatatttttggaggtagaggtttgccaaaggggacccagagtacaggtt
gtgaacttctcatctagtccattcagttttgcctctgtttattcttctgc
ttcatgaattcctaggtttggtttcttatatgtgtttcagatgtcttgga
aatataattaatttcccttaattttccccttacatatatctgttgataat
gtttctttcatccctgaaattctttctttggcatggatttgtctgttaat
gacggtgtctgttgtggattgtatttgatttgccatttgtttcatttcaa
agcatttctgtttgattggtttaaaatgttccaatactctcgctaaactt
tccctccatactttagactcttgcctccagtttactgttatatttcactt
ttggagattgtcttgtcgaggtcttggatagtcttccttaattcctgcat
ttgaatctgtttgtttgaatcttctatatgctcacaaattctctttgact
agcaagactctttaattttttctcattatatttcagttgtgtcttgtaat
ttttggatttccttttaggggagttgactttgtgatggaactgggtagtg
gctgtatccctattcctttgtgttgcttttgtcatgttttatacactctc
aaagaaacattgcttttactccttctctggagcctactgaaattctgctt
tttttatgaatcttcctagagaaatgtttgcatggaagttcatgtctaca
tactctgtgaaacctgtgcctgactatccagatgagcctagcgtgttcat
tgcctatgtgcaagcagacca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_83263034_83264117
seq2: B6Ng01-346O02.b_49_1132 (reverse)

seq1  CCCCCTCCTAATA-GTATCCTTTCCCACTCAAAA--TAGAGCAACAAGTC  47
      |||| |||||||| ||||||||||||||||||||   |||||||||||||
seq2  CCCCTTCCTAATAGGTATCCTTTCCCACTCAAAAATAAGAGCAACAAGTC  50

seq1  CTTTCTTTCCCCTGTAATATCTTCACCCCTTCCTTCCTCTAAAATCTCAT  97
       || ||||||||||||||||| |||||| |    ||||||||||||||||
seq2  TTTCCTTTCCCCTGTAATATCCTCACCCGT---CTCCTCTAAAATCTCAT  97

seq1  TCGCAGCATCTCTTTCTAACCCATCCTCTTGCTCTCAATGTTGCTCACAT  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCAGCATCTCTTTCTAACCCATCCTCTTGCTCTCAATGTTGCTCACAT  147

seq1  CACCAGGCTTGTCTGCTTCTTGAGCCTTTGCTTTCTGTATTTCCTTTACT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGGCTTGTCTGCTTCTTGAGCCTTTGCTTTCTGTATTTCCTTTACT  197

seq1  TGCTGTGCATTGCTATTGGACTGGCATGAGGTTGGTTTCTTATGTGACTC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTGCATTGCTATTGGACTGGCATGAGGTTGGTTTCTTATGTGACTC  247

seq1  ACCTTAAATCTCCCTTTCAGAAAGGCCGCTGTGGGCCATCTGAGTTACAC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTAAATCTCCCTTTCAGAAAGGCCGCTGTGGGCCATCTGAGTTACAC  297

seq1  TGTTATGTAGGCTGTGTTTTTCTTGTTCCTGCAGGTGCCATCTCCAGATA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATGTAGGCTGTGTTTTTCTTGTTCCTGCAGGTGCCATCTCCAGATA  347

seq1  CTCGCTTGTGTTATGTCCTGGTGGGTTGAGTGCCCATGGAACAGCATGGC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGCTTGTGTTATGTCCTGGTGGGTTGAGTGCCCATGGAACAGCATGGC  397

seq1  CTGTCTCACGAACTGTACTCAGAACAGTTCTGGTTCTTCGCCCTTTGTGA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTCACGAACTGTACTCAGAACAGTTCTGGTTCTTCGCCCTTTGTGA  447

seq1  TCGAAGTCTATTGAGTGAAGGAACAGGTGCCACTTATTAGACTCATCACT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAAGTCTATTGAGTGAAGGAACAGGTGCCACTTATTAGACTCATCACT  497

seq1  ATCATAATTGACTGTGGAGAGCATTTTTAAGGGAAAAGCAAAAGTGGCAG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATAATTGACTGTGGAGAGCATTTTTAAGGGAAAAGCAAAAGTGGCAG  547

seq1  GGAGAGATATGCTTTTGGACAGGAGGCCACCCCTACTTCTCTTGAGTTTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGATATGCTTTTGGACAGGAGGCCACCCCTACTTCTCTTGAGTTTT  597

seq1  AACTTCAAGTATCAGTCGGAAAGTTTAAACTTGATTTTCCGAAGAGTAAT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCAAGTATCAGTCGGAAAGTTTAAACTTGATTTTCCGAAGAGTAAT  647

seq1  TTTGGCAATGGGATTATTCCTTTAAGAGTGTAAAGAAAGCTTTTGTCATG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCAATGGGATTATTCCTTTAAGAGTGTAAAGAAAGCTTTTGTCATG  697

seq1  GGGGGTAATTTTACCAGTGTTTCACGTAGAAAGGACTCTTGCTTTCTCAG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGTAATTTTACCAGTGTTTCACGTAGAAAGGACTCTTGCTTTCTCAG  747

seq1  ACATTTCAAAGAATTTTTTGCATAATTCATGAAAAAAATCTTTGTGCATG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTCAAAGAATTTTTTGCATAATTCATGAAAAAAATCTTTGTGCATG  797

seq1  TATGTGCACGTGCATTTGCATGTGTGCGCGTGTGTGTCTGTGTGCGCTCA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGCACGTGCATTTGCATGTGTGCGCGTGTGTGTCTGTGTGCGCTCA  847

seq1  CACACGCGTGTGCATGTGAACATTTGGTGTATATGCATGTTTATGTACAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACGCGTGTGCATGTGAACATTTGGTGTATATGCATGTTTATGTACAA  897

seq1  AGGCCAGAGAGAAAGGAGTCATCAGAGAGAAAGGAGCCTCAGTTGAGGAG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCAGAGAGAAAGGAGTCATCAGAGAGAAAGGAGCCTCAGTTGAGGAG  947

seq1  ATACTTCCATGAGATCCAGCTATAAGGCCTTTTTCTCAGTCAGTGATCAA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTCCATGAGATCCAGCTATAAGGCCTTTTTCTCAGTCAGTGATCAA  997

seq1  TGTTGGGGGTTAGGGGTGGGGGGTGGGGGGATGGTCCAGGCTATTGTGGG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGGGGTTAGGGGTGGGGGGTGGGGGGATGGTCCAGGCTATTGTGGG  1047

seq1  TAGTGCCATGCATGCCTGGACTTGTAGTCCTGAATTC  1084
      |||||||||||||||||||||||||||||||||||||
seq2  TAGTGCCATGCATGCCTGGACTTGTAGTCCTGAATTC  1084


seq1: chr7_83184663_83185814
seq2: B6Ng01-346O02.g_70_1240

seq1  GAATTCCTTATGTTGTGGTGACCCCCCAACCATAACATTATTTTTATTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTATGTTGTGGTGACCCCCCAACCATAACATTATTTTTATTCT  50

seq1  AACTTCATAACTGTGTATCCTATATTCAGAATTCCAGTACATTGGCCTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCATAACTGTGTATCCTATATTCAGAATTCCAGTACATTGGCCTTG  100

seq1  AAGATCAGTGCAGGGTCCATCCTTTGACTCTAGTGTACCCAGGGCCACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCAGTGCAGGGTCCATCCTTTGACTCTAGTGTACCCAGGGCCACTG  150

seq1  AGAAATTGGGGATCTGGTTCTAGTTATCTCTGAGATCATTTCAGGTATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTGGGGATCTGGTTCTAGTTATCTCTGAGATCATTTCAGGTATGG  200

seq1  AGTCATGATTTTAGCTTTCAGATGACATTACAGGGCCTGGAGTCTGTACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATGATTTTAGCTTTCAGATGACATTACAGGGCCTGGAGTCTGTACT  250

seq1  GCCATGGTTCAATGGTTCCGTTGGACCTGTGGATCTAATTACAGTCCCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGGTTCAATGGTTCCGTTGGACCTGTGGATCTAATTACAGTCCCCA  300

seq1  GAGAGTAGACAGACGTCATTGGGTCTGAAGTCTGTTATGAATTGTAATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTAGACAGACGTCATTGGGTCTGAAGTCTGTTATGAATTGTAATGT  350

seq1  AAATATTTTTGGAGGTAGAGGTTTGCCAAAGGGGACCCAGAGTACAGGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTTTTGGAGGTAGAGGTTTGCCAAAGGGGACCCAGAGTACAGGTT  400

seq1  GTGAACTTCTCATCTAGTCCATTCAGTTTTGCCTCTGTTTATTCTTCTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAACTTCTCATCTAGTCCATTCAGTTTTGCCTCTGTTTATTCTTCTGC  450

seq1  TTCATGAATTCCTAGGTTTGGTTTCTTATATGTGTTTCAGATGTCTTGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGAATTCCTAGGTTTGGTTTCTTATATGTGTTTCAGATGTCTTGGA  500

seq1  AATATAATTAATTTCCCTTAATTTTCCCCTTACATATATCTGTTGATAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAATTAATTTCCCTTAATTTTCCCCTTACATATATCTGTTGATAAT  550

seq1  GTTTCTTTCATCCCTGAAATTCTTTCTTTGGCATGGATTTGTCTGTTAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTTTCATCCCTGAAATTCTTTCTTTGGCATGGATTTGTCTGTTAAT  600

seq1  GACGGTGTCTGTTGTGGATTGTATTTGATTTGCCATTTGTTTCATTTC-A  649
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GACGGTGTCTGTTGTGGATTGTATTTGATTTGCCATTTGTTTCATTTCAA  650

seq1  AGCATTTCTGTTTGATTGGTTTAAAATGTTCCAATACTCTCGCTAAACTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTTCTGTTTGATTGGTTTAAAATGTTCCAATACTCTCGCTAAACTT  700

seq1  TCCCTCCATACTTTAGACTCTTGCCTCCAGTTTACTGTTATA-TTCAC-T  747
      |||||||||||||||||||||||||||||||||||||||||| ||||| |
seq2  TCCCTCCATACTTTAGACTCTTGCCTCCAGTTTACTGTTATATTTCACTT  750

seq1  TTGGAGATTGTCTTGTCGAGGTCTTGGATAGTCTTCCTTAATTCCTGCAT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGATTGTCTTGTCGAGGTCTTGGATAGTCTTCCTTAATTCCTGCAT  800

seq1  TTGAATCTGTTTGTTTGAATCTTCTATATGCTCACAAATTCTC-TTGACT  846
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TTGAATCTGTTTGTTTGAATCTTCTATATGCTCACAAATTCTCTTTGACT  850

seq1  AGCAAGACTCTT--AATTTTTCTCA-TATATTTCAGGTGTGTC-TGTAA-  891
      ||||||||||||  | ||||||||| |||||||||| |||||| ||||| 
seq2  AGCAAGACTCTTTAATTTTTTCTCATTATATTTCAGTTGTGTCTTGTAAT  900

seq1  TTTTGGA-TTCCTTTTAGGGGAGTTGAC-TTGTGATGGAACTGGGTAGTG  939
      ||||||| |||||||||||||||||||| |||||||||||||||||||||
seq2  TTTTGGATTTCCTTTTAGGGGAGTTGACTTTGTGATGGAACTGGGTAGTG  950

seq1  GCTGTAT-CCTA-TCCTTTGTGTTGC-TTTGTCATGTTTTATACACCTCT  986
      ||||||| |||| ||||||||||||| |||||||||||||||||| ||||
seq2  GCTGTATCCCTATTCCTTTGTGTTGCTTTTGTCATGTTTTATACA-CTCT  999

seq1  CAAAGAAACATTGCTTTTACTCCTTCTTCTGAGCCTACTGGAATTCTGCT  1036
      |||||||||||||||||||||||||||   |||||||||| |||||||||
seq2  CAAAGAAACATTGCTTTTACTCCTTCTCTGGAGCCTACTGAAATTCTGCT  1049

seq1  TTTTTTATGAATCTTCCTAGAGGAATGTTTGCAT-GAAGTTCATGTCTAC  1085
      |||||||||||||||||||||| ||||||||||| |||||||||||||||
seq2  TTTTTTATGAATCTTCCTAGAGAAATGTTTGCATGGAAGTTCATGTCTAC  1099

seq1  ATACT-GGTGAAACTGGTG-CTGACTAT-CAGATGAG-CTAGCGTG-TCA  1130
      |||||  |||||||  ||| |||||||| |||||||| |||||||| |||
seq2  ATACTCTGTGAAACCTGTGCCTGACTATCCAGATGAGCCTAGCGTGTTCA  1149

seq1  -TGGCTATGTGCCAGCAGGACCA  1152
       || |||||||| |||| |||||
seq2  TTGCCTATGTGCAAGCA-GACCA  1171


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