BAC Information

Click to search

BAC

Clone NameB6Ng01-347K02
Chromosome7 (Build37)
Map Location 61,149,962 - 61,151,143
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040692, Gm1865, LOC100040718, LOC668789
Downstream geneMrps33p, LOC622146, Luzp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-347K02.bB6Ng01-347K02.g
ACCGA129175GA129176
length1,1801,190
definitionB6Ng01-347K02.b B6Ng01-347K02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagcagttattggaaaaagtgttcatggttttaaggaacatgtga
gccgatgaaatgttaaaatatttccatcacagtgaaaaccaaattgtaat
cttgcatatcctaaggtgcttgtttttaagattggattatttagtaatta
aaaactaaaaatgttccacaactgcagcacagagtttatctatagcacag
ctaataatttattatgtcatttttattatgttccttttttgtttgacttt
cagaagtttagttggatttagtttcatttgacagtttattaaaagaaaag
taaaaactgtcaagagagagttccaaggtcagcatgaaggctgtatttta
aaaaacaaagagctgctcattgtctcaaatccagtggatatcttgactta
cgtgctttggaaaatcagcagctttcccaaaagctgagttattggaaata
gtggcaatctggattcagctcagttccattacctgatgggaccaagggag
ttcacctgctgagctgtcatgggtgggttctgggagagcatggtgagtcc
agtgtgcctatgtggcatggtgtgaatattgccagtgtctccctgaggac
tctgaacccagacctgatggacagtgatgcagataaggagcagtgtccta
gcacctcactgtccaggctgcagcagtgtttctagggagaccatgccctt
ctcatatgagttgtggttagtacaattgtgctgaggttgtctagggaaaa
atctcagttcccacagctctgccctgctgccaagtggttcttgtgtagtg
gtaacctggtttgtgtgacagtaagtagaacctatgtatcacccctaaga
tgcaaaatattcaatgtgttcaatatacaaactaaatatatctgtgtcta
tataggatggtaccagttcagttttctaaaacatatcttttacttgctgt
aattttttttattttctgtgtactatgttaaaatgacgttatctttcatc
acatatcaccatacttgtgcttttatatttctgcatttactttaaaattt
ttgttaactcaatgtaacaaattattttaaaggatatagagtcagccact
gcttggaacttaaataaatattgtatggaattctcagaactttatgggat
taagataacagtgatgcattcaggactgac

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattagacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccttatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgcccacagtcagctaatggatggatcacagggctccca
atggaggagctagacaagtaccaaggagctaagggatctgcaaccctata
ggtggatcacattatgactaaccagtactccgagctctgacttctagctg
cattatgttatcaaaagatggctagtcgcatcactgggaaagagaggcca
ttgaacaacaaacttatattgcccagaactgggtacgcagtcaaatggga
ttggccgtaaggggagtggagaatgcttctactcttacgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_61149962_61151143
seq2: B6Ng01-347K02.b_46_1225

seq1  GAATTCAGCAGTTATTGGAAAAAGTGTTCATGGTTTTAAGGAACATGTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCAGTTATTGGAAAAAGTGTTCATGGTTTTAAGGAACATGTGA  50

seq1  GCCGATGAAATGTTAAAATATTTCCATCACAGTGAAAACCAAATTGTAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGATGAAATGTTAAAATATTTCCATCACAGTGAAAACCAAATTGTAAT  100

seq1  CTTGCATATCCTAAGGTGCTTGTTTTTAAGATTGGATTATTTAGTAATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCATATCCTAAGGTGCTTGTTTTTAAGATTGGATTATTTAGTAATTA  150

seq1  AAAACTAAAAATGTTCCACAACTGCAGCACAGAGTTTATCTATAGCACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTAAAAATGTTCCACAACTGCAGCACAGAGTTTATCTATAGCACAG  200

seq1  CTAATAATTTATTATGTCATTTTTATTATGTTCCTTTTTTGTTTGACTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATAATTTATTATGTCATTTTTATTATGTTCCTTTTTTGTTTGACTTT  250

seq1  CAGAAGTTTAGTTGGATTTAGTTTCATTTGACAGTTTATTAAAAGAAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGTTTAGTTGGATTTAGTTTCATTTGACAGTTTATTAAAAGAAAAG  300

seq1  TAAAAACTGTCAAGAGAGAGTTCCAAGGTCAGCATGAAGGCTGTATTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAACTGTCAAGAGAGAGTTCCAAGGTCAGCATGAAGGCTGTATTTTA  350

seq1  AAAAACAAAGAGCTGCTCATTGTCTCAAATCCAGTGGATATCTTGACTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAAAGAGCTGCTCATTGTCTCAAATCCAGTGGATATCTTGACTTA  400

seq1  CGTGCTTTGGAAAATCAGCAGCTTTCCCAAAAGCTGAGTTATTGGAAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGCTTTGGAAAATCAGCAGCTTTCCCAAAAGCTGAGTTATTGGAAATA  450

seq1  GTGGCAATCTGGATTCAGCTCAGTTCCATTACCTGATGGGACCAAGGGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCAATCTGGATTCAGCTCAGTTCCATTACCTGATGGGACCAAGGGAG  500

seq1  TTCACCTGCTGAGCTGTCATGGGTGGGTTCTGGGAGAGCATGGTGAGTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACCTGCTGAGCTGTCATGGGTGGGTTCTGGGAGAGCATGGTGAGTCC  550

seq1  AGTGTGCCTATGTGGCATGGTGTGAATATTGCCAGTGTCTCCCTGAGGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGCCTATGTGGCATGGTGTGAATATTGCCAGTGTCTCCCTGAGGAC  600

seq1  TCTGAACCCAGACCTGATGGACAGTGATGCAGATAAGGAGCAGTGTCCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAACCCAGACCTGATGGACAGTGATGCAGATAAGGAGCAGTGTCCTA  650

seq1  GCACCTCACTGTCCAGGCTGCAGCAGTGTTTCTAGGGAGACCATGCCCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCTCACTGTCCAGGCTGCAGCAGTGTTTCTAGGGAGACCATGCCCTT  700

seq1  CTCATATGAGTTGTGGTTAGTACAATTGTGCTGAGGTTGTCTAGGGAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATATGAGTTGTGGTTAGTACAATTGTGCTGAGGTTGTCTAGGGAAAA  750

seq1  ATCTCAGTTCCCACAGCTCTGCCCTGCTGCCAAGTGGTTCTTGTGTAGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAGTTCCCACAGCTCTGCCCTGCTGCCAAGTGGTTCTTGTGTAGTG  800

seq1  GTAACCTGGTTTGTGTGACAGTAAGTAGAACCTATGTATCACCCCTAAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACCTGGTTTGTGTGACAGTAAGTAGAACCTATGTATCACCCCTAAGA  850

seq1  TGCAAAATATTCAATGTGTTCAATATACAAACTAAATATATCTGTGTCTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAATATTCAATGTGTTCAATATACAAACTAAATATATCTGTGTCTA  900

seq1  TATAGGATGGTACCAGTTCAGTTTTCTAAAACATATCTTTTACTTGCTGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGATGGTACCAGTTCAGTTTTCTAAAACATATCTTTTACTTGCTGT  950

seq1  AA-TTTTTTTATTTTCTGTGTACTATGTTAAAATGACGTTATCTTTCATC  999
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTTTTATTTTCTGTGTACTATGTTAAAATGACGTTATCTTTCATC  1000

seq1  ACATATCACCATACTTGTGCTTTTATATTTCTTGCATTTACTTTAAAATT  1049
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ACATATCACCATACTTGTGCTTTTATATTTC-TGCATTTACTTTAAAATT  1049

seq1  TTTG-TAACTCAATGTAACAAATTATTTTAAAGTATATAGAGTTCAGCCA  1098
      |||| |||||||||||||||||||||||||||| |||||||| |||||||
seq2  TTTGTTAACTCAATGTAACAAATTATTTTAAAGGATATAGAG-TCAGCCA  1098

seq1  CTGCTTTGAAACTTAAAATTAAAATATGTAT-GAATTCTTCAG-ACTTTA  1146
      |||| ||| ||||||||  ||||   ||||| |||||| |||| ||||||
seq2  CTGC-TTGGAACTTAAA--TAAATATTGTATGGAATTC-TCAGAACTTTA  1144

seq1  TGTGATTAAAGAT-ACAGT--AGCATTCCCAGGACTGAC  1182
      || |||| ||||| |||||   |||||  ||||||||||
seq2  TGGGATT-AAGATAACAGTGATGCATT--CAGGACTGAC  1180


| Home | SequenceCutter | Blast | Download |