BAC Information

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BAC

Clone NameB6Ng01-347M18
Chromosome7 (Build37)
Map Location 95,940,352 - 95,941,466
singlet/doubletsinglet
Overlap genenone
Upstream geneGrm5, Ctsc, LOC100039756, Rab38, LOC100039924, LOC666598, EG621562
Downstream geneTmem135, LOC100039969, Fzd4, Prss23, LOC100040001, Me3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-347M18.bB6Ng01-347M18.g
ACCGA129290GA129291
length1,0511,112
definitionB6Ng01-347M18.b B6Ng01-347M18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgttcatgtggctatcttctttaggtttgttgaaagcttacttt
cttgctttttcttgagctttgtctctctctttgtgtttgcattttccctt
tattatcctttgaaggaatggatttgtggaaagatattgtgtaaatttgg
ttttgtcatggaatatctcggtttctccatctatggtaattgagagtttt
actgggtacggtagcccgctgtggcatttgtgttctcttatggtctgtat
aacatctgcccaggattttctggctttcatagtctctggtcaggagctat
aattctaataggtctgcatgcccttatatgttacttgacctttttccctt
accacttttaatattcttttattgttttgtgcattaggtgttttgattat
tatgtgataggaggaatttcttttctggtccaaattatttagagttctgt
gggcttcttgcatgttcatgggcatctctttctttaggtacaggaagttt
ttcttctataattttgttgaagatatttactggcctttaagttggaaatc
ttccttctcatctatacctattatccttaggtttggtcttctcattgttt
cctggatttcctggatgttttgcgttaggatctttttgcattttctttga
ttcttgtgtcaatgttttctatggtatcctctgcacctgatattctcttt
tctatctcttgtattctattccttatgcttccttcaatgactcctgactt
ctttcctaggttttctatttccagagtggtctccctttgtaatttctttt
ttgtttctctttctatttttagatcctggatggttttgttcatttttttt
ctcctgtttggatgtgttctcctgtatttctttaagggagttatttattt
tccttcttataatcttccatcatcataatgagaagtgactttagatccat
atcttgcttttctggtatgatggtgtatccaggacttgctatgttgggga
gagtttgatgttaagcatctttgggtttctgatgccttctgttttgtgtg
g
gaattcagaaaggatgagaaagtaaagagactttttttttagaatttaga
cgttaattagaatgtctagtataaggttatgataaaaagaataaagtatt
gagttgttttctttaatttaaatgttttataggtaacaaatccacttatc
ttctgaacctatatggacttgacttatcaacacacacatttgcatgtata
aaaatgattagttataatcagttgcattgcagagaattgaatgttgcagt
gagagtgaagaacattatcttaaattttaattaagtattaaaacttgctt
cttcattttctttattagaatattatatctttgggccaaaggtaatgaat
agaagaggttattgctacaatgagggcacagcagtaggcaattctaatat
taatttatgatagtgacttttgcaatcagatatctggaagcatgcacaca
tcctgaggctacatcctgattatttctcagttgtgtcctcttaggggcat
tcagggatctcctgcaatatgccattatggatttatactcttatccctaa
attctctgaacatgccatggcatactaataagagtaacagatacactgta
ttagaaacttgctttggactggaaattttgtataggttaccctatatatc
ctaaaagcagtcctatggtaaatcaacataatctcccagtatggatcagc
ctatttgacgccaaagtatttgtccttgaactctaggacattcaattccc
aaactgtagccctttccattttaccaacatttttgatctcttgaaacctt
gcttgcatgagtattctccttgtttcaatgtttgtcattatttatttgac
taaagcatttaatttttctatttatttatcttttctgatagacaagaagt
aatttttaattcaattttatacaatttttttattcaattcattcaatagc
atcatctttttcccagcatgtagatctagatgtatctcagttaggatatt
caaatgctttgtctgtagaaatttgattttattataggtatgccttggca
tctggtgatagctgggattggtaatatctaagaataacactacaggactc
ttaggttcctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_95940352_95941466
seq2: B6Ng01-347M18.g_67_1178 (reverse)

seq1  TCAGGAA-CTAAGAGTCTTTGTAGTTGTTTATTC-TAGATATTAACAAAT  48
      ||||||| |||||||||  ||||||   |||||| |||||||| || |||
seq2  TCAGGAACCTAAGAGTC-CTGTAGT--GTTATTCTTAGATATT-ACCAAT  46

seq1  TCCAGCTATCACCAGATGCAAAGGCATA-CTATATAAAATTCAAAATTTC  97
       |||||||||||||||||| |||||||| |||||  ||| || |||||||
seq2  CCCAGCTATCACCAGATGCCAAGGCATACCTATAATAAAATC-AAATTTC  95

seq1  TACAGACAAAGCATTTGAATATCCTAACTGAGATACATCTAGATCTACAT  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGACAAAGCATTTGAATATCCTAACTGAGATACATCTAGATCTACAT  145

seq1  GCTGGGAAAAAGATGATGCTATTTGAATGAATTGAAT-AAAAAATTGTAT  196
      ||||||||||||||||||||| ||||||||||||||| ||||||||||||
seq2  GCTGGGAAAAAGATGATGCTA-TTGAATGAATTGAATAAAAAAATTGTAT  194

seq1  AAAATTGAATTAAAAATTACTTCTTGTCTATCAGAAAAGATAAATAAATA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTGAATTAAAAATTACTTCTTGTCTATCAGAAAAGATAAATAAATA  244

seq1  GAAAAATTAAATGCTTTTAGTCAAATAAATAATGACAAACATTGAAACAA  296
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GAAAAATTAAATGC-TTTAGTCAAATAAATAATGACAAACATTGAAACAA  293

seq1  GGAGAATACTCATGCAAGCAAGGTTTCAAGAGATCAAAAATGTTGGTAAA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAATACTCATGCAAGCAAGGTTTCAAGAGATCAAAAATGTTGGTAAA  343

seq1  ATGGAAAGGGCTACAGTTTGGGAATTGAATGTCCTAGAGTTCAAGGACAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAAGGGCTACAGTTTGGGAATTGAATGTCCTAGAGTTCAAGGACAA  393

seq1  ATACTTTGGCGTCAAATAGGCTGATCCATACTGGGAGATTATGTTGATTT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTTGGCGTCAAATAGGCTGATCCATACTGGGAGATTATGTTGATTT  443

seq1  ACCATAGGACTGCTTTTAGGATATATAGGGTAACCTATACAAAATTTCCA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATAGGACTGCTTTTAGGATATATAGGGTAACCTATACAAAATTTCCA  493

seq1  GTCCAAAGCAAGTTTCTAATACAGTGTATCTGTTACTCTTATTAGTATGC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAAAGCAAGTTTCTAATACAGTGTATCTGTTACTCTTATTAGTATGC  543

seq1  CATGGCATGTTCAGAGAATTTAGGGATAAGAGTATAAATCCATAATGGCA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCATGTTCAGAGAATTTAGGGATAAGAGTATAAATCCATAATGGCA  593

seq1  TATTGCAGGAGATCCCTGAATGCCCCTAAGAGGACACAACTGAGAAATAA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGCAGGAGATCCCTGAATGCCCCTAAGAGGACACAACTGAGAAATAA  643

seq1  TCAGGATGTAGCCTCAGGATGTGTGCATGCTTCCAGATATCTGATTGCAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGATGTAGCCTCAGGATGTGTGCATGCTTCCAGATATCTGATTGCAA  693

seq1  AAGTCACTATCATAAATTAATATTAGAATTGCCTACTGCTGTGCCCTCAT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCACTATCATAAATTAATATTAGAATTGCCTACTGCTGTGCCCTCAT  743

seq1  TGTAGCAATAACCTCTTCTATTCATTACCTTTGGCCCAAAGATATAATAT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCAATAACCTCTTCTATTCATTACCTTTGGCCCAAAGATATAATAT  793

seq1  TCTAATAAAGAAAATGAAGAAGCAAGTTTTAATACTTAATTAAAATTTAA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATAAAGAAAATGAAGAAGCAAGTTTTAATACTTAATTAAAATTTAA  843

seq1  GATAATGTTCTTCACTCTCACTGCAACATTCAATTCTCTGCAATGCAACT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATGTTCTTCACTCTCACTGCAACATTCAATTCTCTGCAATGCAACT  893

seq1  GATTATAACTAATCATTTTTATACATGCAAATGTGTGTGTTGATAAGTCA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATAACTAATCATTTTTATACATGCAAATGTGTGTGTTGATAAGTCA  943

seq1  AGTCCATATAGGTTCAGAAGATAAGTGGATTTGTTACCTATAAAACATTT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCATATAGGTTCAGAAGATAAGTGGATTTGTTACCTATAAAACATTT  993

seq1  AAATTAAAGAAAACAACTCAATACTTTATTCTTTTTATCATAACCTTATA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAAAGAAAACAACTCAATACTTTATTCTTTTTATCATAACCTTATA  1043

seq1  CTAGACATTCTAATTAACGTCTAAATTCTAAAAAAAAAGTCTCTTTACTT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGACATTCTAATTAACGTCTAAATTCTAAAAAAAAAGTCTCTTTACTT  1093

seq1  TCTCATCCTTTCTGAATTC  1115
      |||||||||||||||||||
seq2  TCTCATCCTTTCTGAATTC  1112