BAC Information

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BAC

Clone NameB6Ng01-347P02
Chromosome7 (Build37)
Map Location 25,001,104 - 25,114,513
singlet/doubletdoublet
Overlap geneZfp109, Zfp108, Zfp93, LOC100043690, Zfp61, LOC100043691, Zfp94
Upstream geneLOC100043667, LOC667623, LOC100043088, EG628664, Nlrp4e, LOC434261, Nlrp5, LOC100043095, EG622032, LOC667651, LOC100043101, LOC100043103, EG546944, V1rd7, V1rd9, EG545934, V1rd22, LOC384573, EG622222, LOC546943, V1rd12, V1rd13, V1rd17, LOC100043121, V1rd16, LOC384575, V1rd20, V1rd18, V1rd15, EG622446, Zfp180, Zfp112, Zfp235, Zfp114, Zfp111
Downstream gene1700008P20Rik, Lypd5, Kcnn4, 1500002O20Rik, Irgc1, Plaur, Cadm4, Zfp428, Irgq, 2310033E01Rik, Xrcc1, Zfp575, Ethe1, LOC100043138, EG232970, Lypd3, LOC100043706, Tex101, Gm1096, BC049730, EG210155, Cd177, Ceacam10, EG545936, LOC100043712, Lypd4, Dmrtc2, Rps19, Cd79a, Arhgef1, EG232974, Rabac1, Atp1a3, Grik5, Zfp574, Pou2f2, Dedd2, Zfp526, Gsk3a, 9130221H12Rik, Erf, Cic, Pafah1b3, EG623131, Tmem145, Megf8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-347P02.bB6Ng01-347P02.g
ACCGA129390GA129391
length1,1431,001
definitionB6Ng01-347P02.b B6Ng01-347P02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(25,113,377 - 25,114,513)(25,001,104 - 25,002,100)
sequence
gaattccttaaagctccagggcctgcttgcttggcatagcagaggctaac
agcaaagagaccctgtgccaacatgagagaaggtagggacacttggtact
ggcctctggcttccacatacatgctgtggtatttataggcatgaagatgt
gcgtgtgcgcgcttgtgcacacagacacacacacacacacacacacacac
acacacacacacacgtgggtgctgtgacattatgtgcctgttctcacaga
catgaaggtacacatacacacaccacatcacaccacaccacacacaaaga
ccttagaacacctaggttagacagggatcagccacagttgatgacggaca
gtttgcttttgcaaacaatgttgacttttcatgtgggcccacagataacc
aatgggtaacaaaaaccaggcagaaatagccatttgtcccttgggccaga
gtcttgctcagctgtgtctgttggcgagtcatcctcagagtgttcgtaca
gcaccaataactccccgttcaaggccaacgacactgagatggtaggattt
ctttttgacgtttcccagggacattgttgacagattactgtgtgcttgct
tttatagtctgctgtttgagacctctggtgtccagcagtctccggtcacc
ttcttaaacctcgagtcttctaggcagcgctccccatgaggaggttgcca
ctggaaaacagtcatcttgtgggaaccaaatcacctcaaacaacaatgcc
cagagccttgcagaatcagagtagaaataatgaccagtcaagccacagtg
tgacccagagcacttaattatgtggacctcttggccctggttccaacctt
ccttttttcccctcacatagtatatagccctgggtagcttgctaaggaga
ccaggctatccctgatctaacagggatccacctgtctctgtctctgacgt
gttgggattaaaggcgagcagtggccacacctgggcctgtttcggtcttt
ttttaatgattattgtcatttacctgacgactgcactaaaggacgttggg
gtcctcctttggttttccaatgaagctgtcttgagtaattttgttttctg
ctttcatcaaattttgggattgattttgggaggtgtgtggcca
gaattccaggacagccttggctacgtgaagaaaccctgtcttggaaaaac
aaaaacaacaacaacaacaaaaaatgaaacaactaaataagaaaatgcct
ccattaaaagaaaggaagaaagaaagaaggaaggaagggaggaaagaaag
aaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaa
aggaaggaaggaaggaaggaaggaaggaaggaaagaaggaagaggaaatg
cctccataagatccagctttaagccattttcttcattttgattgatggga
gaggtcacagaccactatggttagggacacccctgggcaggtggtcctga
attctataagaaagcaggttgaacaagccatatggagcaagtcagtaagc
agcagccctccatgccgtctgcatcagcttctgcctccagttttctgctc
tgcttgagtttctgacctgatttgcctcaatgatggaccataatatggaa
gtgtgaaagaaataacctcttttgcccccaacttgctttctggtcatggt
gttttgttgcagcaatagaaaccctaactaaggcagatagtagtggtgca
cagctataatcccatgatgtctctttacagcaatgaaacactaagacaga
agttggtacaaggagtggggtattgttgtgataggcctgattgtgctttt
ctttggaggaatatggatttggggactttagaaagcagtgaaatgcttta
acttgggcttaatgggtcatcctaataggaatatggaaaatcttgatgct
gagagtgatttgaactgtgagggccaggctcaagaggtttcagagagaat
gctactatatggcctagagactgttgtgatatttaggcgatgaattgtgg
ctgctttttgcccttgtcagagtctacctgaggctaaagtggaagaagat
tgagattaattgcataagcaaaggaagtctcaaactagcctggataaatt
c
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_25113377_25114513
seq2: B6Ng01-347P02.b_46_1188 (reverse)

seq1  TGGCCACACA-CTCCCAAAATCAAACCCAAAA-TTGATGAAAAGCAGAAA  48
      |||||||||| ||||||||||||| ||||||| |||||| ||||||||||
seq2  TGGCCACACACCTCCCAAAATCAATCCCAAAATTTGATG-AAAGCAGAAA  49

seq1  ACAAATTTACTCAAGACAGCTTCATTGGAAACACAAAGGAGGA-CCCAAC  97
      ||||| |||||||||||||||||||||||||  |||||||||| ||||||
seq2  ACAAAATTACTCAAGACAGCTTCATTGGAAAACCAAAGGAGGACCCCAAC  99

seq1  GTCC-TTAGTGCAGTCGTCAGGTAAATGGACATAATCATT-AAAAAAGAC  145
      |||| |||||||||||||||||||||||   ||||||||| |||||||||
seq2  GTCCTTTAGTGCAGTCGTCAGGTAAATGACAATAATCATTAAAAAAAGAC  149

seq1  CGAAACAGG-CCAGGTGTGG-CACTGCTCGCCTTTAATCCCAACACGTCA  193
      ||||||||| |||||||||| |||||||||||||||||||||||||||||
seq2  CGAAACAGGCCCAGGTGTGGCCACTGCTCGCCTTTAATCCCAACACGTCA  199

seq1  GAGACAGAGACAGGTGGATCCCTGTTAGATCAGGGATAGCCTGGTCTCCT  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGAGACAGGTGGATCCCTGTTAGATCAGGGATAGCCTGGTCTCCT  249

seq1  TAGCAAGCTACCCAGGGCTATATACTATGTGAGGGGAAAAAAGGAAGGTT  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAAGCTACCCAGGGCTATATACTATGTGAGGGGAAAAAAGGAAGGTT  299

seq1  GGAACCAGGGCCAAGAGGTCCACATAATTAAGTGCTCTGGGTCACACTGT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACCAGGGCCAAGAGGTCCACATAATTAAGTGCTCTGGGTCACACTGT  349

seq1  GGCTTGACTGGTCATTATTTCTACTCTGATTCTGCAAGGCTCTGGGCATT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGACTGGTCATTATTTCTACTCTGATTCTGCAAGGCTCTGGGCATT  399

seq1  GTTGTTTGAGGTGATTTGGTTCCCACAAGATGACTGTTTTCCAGTGGCAA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTTGAGGTGATTTGGTTCCCACAAGATGACTGTTTTCCAGTGGCAA  449

seq1  CCTCCTCATGGGGAGCGCTGCCTAGAAGACTCGAGGTTTAAGAAGGTGAC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTCATGGGGAGCGCTGCCTAGAAGACTCGAGGTTTAAGAAGGTGAC  499

seq1  CGGAGACTGCTGGACACCAGAGGTCTCAAACAGCAGACTATAAAAGCAAG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAGACTGCTGGACACCAGAGGTCTCAAACAGCAGACTATAAAAGCAAG  549

seq1  CACACAGTAATCTGTCAACAATGTCCCTGGGAAACGTCAAAAAGAAATCC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAGTAATCTGTCAACAATGTCCCTGGGAAACGTCAAAAAGAAATCC  599

seq1  TACCATCTCAGTGTCGTTGGCCTTGAACGGGGAGTTATTGGTGCTGTACG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATCTCAGTGTCGTTGGCCTTGAACGGGGAGTTATTGGTGCTGTACG  649

seq1  AACACTCTGAGGATGACTCGCCAACAGACACAGCTGAGCAAGACTCTGGC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTCTGAGGATGACTCGCCAACAGACACAGCTGAGCAAGACTCTGGC  699

seq1  CCAAGGGACAAATGGCTATTTCTGCCTGGTTTTTGTTACCCATTGGTTAT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGGACAAATGGCTATTTCTGCCTGGTTTTTGTTACCCATTGGTTAT  749

seq1  CTGTGGGCCCACATGAAAAGTCAACATTGTTTGCAAAAGCAAACTGTCCG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGGCCCACATGAAAAGTCAACATTGTTTGCAAAAGCAAACTGTCCG  799

seq1  TCATCAACTGTGGCTGATCCCTGTCTAACCTAGGTGTTCTAAGGTCTTTG  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCAACTGTGGCTGATCCCTGTCTAACCTAGGTGTTCTAAGGTCTTTG  849

seq1  TGTGTGGTGTGGTGTGATGTGGTGTGTGTATGTGTACCTTCATGTCTGTG  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGGTGTGGTGTGATGTGGTGTGTGTATGTGTACCTTCATGTCTGTG  899

seq1  AGAACAGGCACATAATGTCACAGCACCCACGTGTGTGTGTGTGTGTGTGT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAGGCACATAATGTCACAGCACCCACGTGTGTGTGTGTGTGTGTGT  949

seq1  GTGTGTGTGTGTGTGTGTGTCTGTGTGCACAAGCGCGCACACGCACATCT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTCTGTGTGCACAAGCGCGCACACGCACATCT  999

seq1  TCATGCCTATAAATACCACAGCATGTATGTGGAAGCCAGAGGCCAGTACC  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCCTATAAATACCACAGCATGTATGTGGAAGCCAGAGGCCAGTACC  1049

seq1  AAGTGTCCCTACCTTCTCTCATGTTGGCACAGGGTCTCTTTGCTGTTAGC  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTCCCTACCTTCTCTCATGTTGGCACAGGGTCTCTTTGCTGTTAGC  1099

seq1  CTCTGCTATGCCAAGCAAGCAGGCCCTGGAGCTTTAAGGAATTC  1137
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCTATGCCAAGCAAGCAGGCCCTGGAGCTTTAAGGAATTC  1143

seq1: chr7_25001104_25002100
seq2: B6Ng01-347P02.g_66_1066

seq1  GAATTCCAGGACAGCCTTGGCTACGTGAAGAAACCCTGTCTTGGAAAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACAGCCTTGGCTACGTGAAGAAACCCTGTCTTGGAAAAAC  50

seq1  AAAAACAACAACAACAACAAAAAATGAAACAACTAAATAAGAAAATGCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAACAACAACAACAAAAAATGAAACAACTAAATAAGAAAATGCCT  100

seq1  CCATTAAAAGAAAGGAAGAAAGAAAGAAGGAAGGAAGGGAG----GAAAG  146
      |||||||||||||||||||||||||||||||||||||||||    |||||
seq2  CCATTAAAAGAAAGGAAGAAAGAAAGAAGGAAGGAAGGGAGGAAAGAAAG  150

seq1  AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA  200

seq1  AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAGGAAGAGGAAATG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAGGAAGAGGAAATG  250

seq1  CCTCCATAAGATCCAGCTTTAAGCCATTTTCTTCATTTTGATTGATGGGA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCATAAGATCCAGCTTTAAGCCATTTTCTTCATTTTGATTGATGGGA  300

seq1  GAGGTCACAGACCACTATGGTTAGGGACACCCCTGGGCAGGTGGTCCTGA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCACAGACCACTATGGTTAGGGACACCCCTGGGCAGGTGGTCCTGA  350

seq1  ATTCTATAAGAAAGCAGGTTGAACAAGCCATATGGAGCAAGTCAGTAAGC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTATAAGAAAGCAGGTTGAACAAGCCATATGGAGCAAGTCAGTAAGC  400

seq1  AGCAGCCCTCCATGCCGTCTGCATCAGCTTCTGCCTCCAGTTTTCTGCTC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCCCTCCATGCCGTCTGCATCAGCTTCTGCCTCCAGTTTTCTGCTC  450

seq1  TGCTTGAGTTTCTGACCTGATTTGCCTCAATGATGGACCATAATATGGAA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGAGTTTCTGACCTGATTTGCCTCAATGATGGACCATAATATGGAA  500

seq1  GTGTGAAAGAAATAACCTCTTTTGCCCCCAACTTGCTTTCTGGTCATGGT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGAAAGAAATAACCTCTTTTGCCCCCAACTTGCTTTCTGGTCATGGT  550

seq1  GTTTTGTTGCAGCAATAGAAACCCTAACTAAGGCAGATAGTAGTGGTGCA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTTGCAGCAATAGAAACCCTAACTAAGGCAGATAGTAGTGGTGCA  600

seq1  CAGCTATAATCCCATGATGTCTCTTTACAGCAATGAAACACTAAGACAGA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTATAATCCCATGATGTCTCTTTACAGCAATGAAACACTAAGACAGA  650

seq1  AGTTGGTACAAGGAGTGGGGTATTGTTGTGATAGGCCTGATTGTGCTTTT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGTACAAGGAGTGGGGTATTGTTGTGATAGGCCTGATTGTGCTTTT  700

seq1  CTTTGGAGGAATATGGATTTGGGGACTTTAGAAGGCAGTGAAATGCTTTA  746
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CTTTGGAGGAATATGGATTTGGGGACTTTAGAAAGCAGTGAAATGCTTTA  750

seq1  ACTTGGGCTTAATGGGTCATCCTAATAGGAATATGGAAAATCTTGATGCT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGGCTTAATGGGTCATCCTAATAGGAATATGGAAAATCTTGATGCT  800

seq1  GAGAGTGATTTGAACTGTGAGGGCCAGGCTCAAGAGGTTTCAGAGAAGAA  846
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GAGAGTGATTTGAACTGTGAGGGCCAGGCTCAAGAGGTTTCAGAG-AGAA  849

seq1  TGCTACTATATGGCCTAGAGACTGTTGTGATATTTAGGCGATGAA-TGTG  895
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TGCTACTATATGGCCTAGAGACTGTTGTGATATTTAGGCGATGAATTGTG  899

seq1  GCTGCTTTTTGCCCTTGTTCAGAGTCTACCTGAGGCTAAAGT-GAAG-AG  943
      ||||||||||||||||| |||||||||||||||||||||||| |||| ||
seq2  GCTGCTTTTTGCCCTTG-TCAGAGTCTACCTGAGGCTAAAGTGGAAGAAG  948

seq1  ATTGAGATTAATTGCATTAGCAAAGGAAGTCTCAAACTAGCCTGGTATAA  993
      ||||||||||||||||| ||||||||||||||||||||||||||| ||||
seq2  ATTGAGATTAATTGCATAAGCAAAGGAAGTCTCAAACTAGCCTGG-ATAA  997

seq1  ATTC  997
      ||||
seq2  ATTC  1001