BAC Information

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BAC

Clone NameB6Ng01-348B05
Chromosome7 (Build37)16 (Build37)
Map Location 110,322,261 - 110,323,50585,018,060 - 85,019,126
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneNup98, Frag1, Rhog, Stim1, Rrm1, Olfr543, Olfr544, Olfr545, LOC667284, Olfr547, Olfr548-ps1, Olfr549, Trim21, LOC384699, Olfr550, Olfr551, Olfr552, Olfr553, Olfr554, LOC100040840, Olfr555, Olfr556, Trim68, Olfr557, Olfr558, Olfr33, Olfr559, Olfr78, Olfr560, Olfr561, Olfr562-ps1, Olfr563-ps1, Olfr564, Olfr565-ps1, Olfr566, GA_x5J8B7W5P47-379997-380552, Olfr567-ps1, Olfr568, Olfr569, Olfr570, Olfr571, Olfr572, Olfr573-ps1, Olfr574, Olfr575, Olfr576, Olfr577, Olfr578, Olfr1527-ps1, Olfr579-ps1, Olfr580-ps1, Olfr581-ps1, Olfr582, Olfr583, Olfr584, Olfr585, Olfr586, Olfr587-ps1, Olfr588-ps1, Olfr589, Olfr590-ps1, Olfr591
Downstream geneOlfr592, Olfr593, Olfr594, Olfr595-ps1, Usp17, Dub2a, LOC100041187, Olfr597, GA_x5J8B7TU1BB-380-666, Olfr598, Olfr599, Olfr600, Olfr601, Olfr602-ps1, Olfr604, Olfr596-ps1, Dub2, Olfr605, Olfr606, EG546989, Olfr608, Olfr609, Olfr610, Olfr611, EG545985, Olfr614, Olfr615, Olfr616, LOC100042167, Olfr617, Olfr618, Olfr619, Olfr620, LOC667639, Olfr622, Olfr623, Olfr624, Olfr625-ps1, Olfr261-ps1, Olfr260-ps1, Olfr627, Olfr1526-ps1, Olfr629, Olfr630, Olfr69, Olfr68, Olfr67, Hbb-b1, EG436003, Hbb-bh1, Hbb-y, Olfr66, Olfr64, Olfr65, Olfr631, Olfr632, Olfr633, Olfr634-ps1, LOC233614, Olfr635, Olfr636-ps1, Olfr637-ps1, Olfr638, Olfr639, Olfr640, Olfr641, Olfr642, Olfr643, Olfr644, Olfr645, Olfr646, 4931431F19Rik, Ubqln3, Ubqlnl, E030002O03Rik, Olfr647-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-348B05.bB6Ng01-348B05.g
ACCGA129479GA129480
length1,2181,072
definitionB6Ng01-348B05.b B6Ng01-348B05.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(110,322,261 - 110,323,505)(85,018,060 - 85,019,126)
sequence
gaattcttgtaaatatatacctacaaattatttcatcttatatggaatca
tctaaagttgtagtcattctgtttttaaaacagcatcacctaaactcaga
tttaggttttgctaacagtgaagtctgcgaaaatcatgttattcctttat
tgagatacatttaatttttgtatcttccatgcaatgaagaaccttaatgc
ctattatctatatgttgacattttattgctatattattttgcattactat
tttgctttttgaaaagtgaactggaaattagtgagtatgtgagaatgatg
gttatagaaaaataagcattagtcaaagaagagagatatgtgagagctaa
aaggagatgttccatgcagaatttatggttttagatcttagtaattattt
tagtaaatgccggttgatatattacttagacttttgacacaggaaagcca
atacttagaaaaatgcttcaatgctatgaaatgattggaaggagattcat
ttacatctgcctgactatcattaatgtgaatcaaatctaggatgaggaca
gaggtagaaggtgatcagggaagaacattattcttggcccttcactggct
gccaaactgatgttcactctttagcttatatggcaattattgcataaatt
tgattgtaattggtggtctctgctctcataatttccttttatgtatcaag
ttagtcaggtgatttgctctgttctacgctgattctacagtattctattc
cattaaagctattctgattttcccattgctctgaaaatttctcttgtatc
ctttgacaccatggtcagcttcatattgacatttgcttattacacgactt
ttatttttaaagcatgaggatactatttaagttgctgtatatagttactt
cttttcttttaataaaggtaatagcaagtgtcctaacctttttaggattt
attatagtggatctatacattataatgtcctttagattatgaaaatcatc
acttagccattactcacactgtctgactggagtgtcatagagactgacat
cataatgaattaaatgatagtatttagactttatactgtttttgaagttt
acaccaatacttattacttcatgattttactacagagacagcagcatgtt
atatctttggagtttggaacgctgacatgtatctagaggcctcagaagtc
gagtatggcatttgtgaa
gaattcatccttatcttctaataagcctggtgataattaaagaaagaatg
tgttcacatggtttcaagctcttatctcgcttaacaccactacttctttg
tgtgttttggaaagatattcctaactttccctgaaaatcccccagagcct
gatacagagcaatagcacagcaggcctcgaggatcccccagccctagacc
tgtatgcgccgtgagccctgggggctcagaatgagctctgacctcatcat
cctgtgagtctggagacccccatgagcaaagcctgctgacatcagataac
tctgaagaccgtaagatgctcctagctgctggcttctgcttggttgctct
gagctggcaatttgcaaggatcgtgtttagaaagttaaaaagttagatag
atcaatctctacgttggagaacaagcagacaaaccacttaaaatggtgtg
tgtccggacctcatagaggacagacagtgtgtgtagataaagaattaaaa
aacaagcagcatttccccacattattatgttttcatttgttacaaagaaa
acggcttggctttggcatatgattcatgcgcatttccttcaaaaaagaaa
agaaaagaaaagaaatgaaatgtaaagagggacagccctctttacaactt
tcagccacaattctccaaggtggacgatagttatttctagagctatataa
tccattgtcgagtaatgagcaaccatcgttgtctagggatcttcatttga
ttatgccgggacaaagatgaatttggtaaattctaattaaaaaaaaagaa
aaaatgtccacttaagaatggtagaaaaaaaagaatgcctggtatctcta
ctgtgtctatatagagagctcacaagtaaattgccttaaagtaattgttg
ttaataactgttagcctgatgttactcacattcaaaatggaattgttcac
agaaacaagcaaaaatttcagtggctcattataaatatgttgataataaa
ataattttaatattcattaacatttagtcctgaattttctctacctagtg
acacacacacacacacacatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_110322261_110323505
seq2: B6Ng01-348B05.b_45_1262

seq1  GAATTCTTGTAAATATATACCTACAAATTATTTCATCTTATATGGAATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGTAAATATATACCTACAAATTATTTCATCTTATATGGAATCA  50

seq1  TCTAAAGTTGTAGTCATTCTGTTTTTAAAACAGCATCACCTAAACTCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAGTTGTAGTCATTCTGTTTTTAAAACAGCATCACCTAAACTCAGA  100

seq1  TTTAGGTTTTGCTAACAGTGAAGTCTGCGAAAATCATGTTATTCCTTTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGTTTTGCTAACAGTGAAGTCTGCGAAAATCATGTTATTCCTTTAT  150

seq1  TGAGATACATTTAATTTTTGTATCTTCCATGCAATGAAGAACCTTAATGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATACATTTAATTTTTGTATCTTCCATGCAATGAAGAACCTTAATGC  200

seq1  CTATTATCTATATGTTGACATTTTATTGCTATATTATTTTGCATTACTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTATCTATATGTTGACATTTTATTGCTATATTATTTTGCATTACTAT  250

seq1  TTTGCTTTTTGAAAAGTGAACTGGAAATTAGTGAGTATGTGAGAATGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTTTTGAAAAGTGAACTGGAAATTAGTGAGTATGTGAGAATGATG  300

seq1  GTTATAGAAAAATAAGCATTAGTCAAAGAAGAGAGATATGTGAGAGCTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATAGAAAAATAAGCATTAGTCAAAGAAGAGAGATATGTGAGAGCTAA  350

seq1  AAGGAGATGTTCCATGCAGAATTTATGGTTTTAGATCTTAGTAATTATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGATGTTCCATGCAGAATTTATGGTTTTAGATCTTAGTAATTATTT  400

seq1  TAGTAAATGCCGGTTGATATATTACTTAGACTTTTGACACAGGAAAGCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAAATGCCGGTTGATATATTACTTAGACTTTTGACACAGGAAAGCCA  450

seq1  ATACTTAGAAAAATGCTTCAATGCTATGAAATGATTGGAAGGAGATTCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTAGAAAAATGCTTCAATGCTATGAAATGATTGGAAGGAGATTCAT  500

seq1  TTACATCTGCCTGACTATCATTAATGTGAATCAAATCTAGGATGAGGACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATCTGCCTGACTATCATTAATGTGAATCAAATCTAGGATGAGGACA  550

seq1  GAGGTAGAAGGTGATCAGGGAAGAACATTATTCTTGGCCCTTCACTGGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTAGAAGGTGATCAGGGAAGAACATTATTCTTGGCCCTTCACTGGCT  600

seq1  GCCAAACTGATGTTCACTCTTTAGCTTATATGGCAATTATTGCATAAATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAACTGATGTTCACTCTTTAGCTTATATGGCAATTATTGCATAAATT  650

seq1  TGATTGTAATTGGTGGTCTCTGCTCTCATAATTTCCTTTTATGTATCAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGTAATTGGTGGTCTCTGCTCTCATAATTTCCTTTTATGTATCAAG  700

seq1  TTAGTCAGGTGATTTGCTCTGTTCTACGCTGATTCTACAGTATTCTATTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTCAGGTGATTTGCTCTGTTCTACGCTGATTCTACAGTATTCTATTC  750

seq1  CATTAAAGCTATTCTGATTTTCCCATTGCTCTGAAAATTTCTCTTGTATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAAGCTATTCTGATTTTCCCATTGCTCTGAAAATTTCTCTTGTATC  800

seq1  CTTTGACACCATGGTCAGCTTCATATTGACATTTGCTTATTACACGACTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGACACCATGGTCAGCTTCATATTGACATTTGCTTATTACACGACTT  850

seq1  TTATTTTTAAAGCATGAGGATACTATTTAAGTTGCTGTATATAGTTACTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTAAAGCATGAGGATACTATTTAAGTTGCTGTATATAGTTACTT  900

seq1  CTTTTCTTTTAATAAAGGTAATAGCAAGTGTCCTAACCTTTTTAGGATTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTTTTAATAAAGGTAATAGCAAGTGTCCTAACCTTTTTAGGATTT  950

seq1  ATTATAGTGGATCTATACATTATAATGTCCTTTAGATTATGAAAATCATC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAGTGGATCTATACATTATAATGTCCTTTAGATTATGAAAATCATC  1000

seq1  ACTTAAGCCATTACTCAACACTGTCTGAACTGGAGTGTTCATAGGAGACT  1050
      |||| ||||||||||| |||||||||| ||||||||| ||||| ||||||
seq2  ACTT-AGCCATTACTC-ACACTGTCTG-ACTGGAGTG-TCATA-GAGACT  1045

seq1  GAACATCATTAATGAATTAAAATGATAGTATTTTAGACTTTTATACTGTT  1100
      | |||||| ||||||||| ||||||||||| ||||||| |||||||||||
seq2  G-ACATCA-TAATGAATT-AAATGATAGTA-TTTAGAC-TTTATACTGTT  1090

seq1  TTTGAAGTTTTACAACCAAATACTTTATTTTACTTCATGATTTTACTTAC  1150
      ||||||| ||||||  | ||||||   | ||||||||||||||||| |||
seq2  TTTGAAG-TTTACA--CCAATACT---TATTACTTCATGATTTTAC-TAC  1133

seq1  AGAGACAGCAGGCATG-TATATCCTTTTGAGTTTGGAACAGCTGGACACA  1199
      |||||||||| ||||| ||||| |||| ||||||||||| ||||   |||
seq2  AGAGACAGCA-GCATGTTATAT-CTTTGGAGTTTGGAAC-GCTG---ACA  1177

seq1  TGTATCTAAGAAGCCTCAGGAAGTCCGAGGGTATGGCATTTGTGAA  1245
      ||||||| ||| |||||| ||||||   | ||||||||||||||||
seq2  TGTATCT-AGAGGCCTCA-GAAGTC---GAGTATGGCATTTGTGAA  1218

seq1: chr16_85018060_85019126
seq2: B6Ng01-348B05.g_65_1136

seq1  GAATTCATCCTTATCTTCTAATAAGCCTGGTGATAATTAAAGAAAGAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCCTTATCTTCTAATAAGCCTGGTGATAATTAAAGAAAGAATG  50

seq1  TGTTCACATGGTTTCAAGCTCTTATCTCGCTTAACACCACTACTTCTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCACATGGTTTCAAGCTCTTATCTCGCTTAACACCACTACTTCTTTG  100

seq1  TGTGTTTTGGAAAGATATTCCTAACTTTCCCTGAAAATCCCCCAGAGCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTTGGAAAGATATTCCTAACTTTCCCTGAAAATCCCCCAGAGCCT  150

seq1  GATACAGAGCAATAGCACAGCAGGCCTCGAGGATCCCCCAGCCCTAGACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACAGAGCAATAGCACAGCAGGCCTCGAGGATCCCCCAGCCCTAGACC  200

seq1  TGTATGCGCCGTGAGCCCTGGGGGCTCAGAATGAGCTCTGACCTCATCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGCGCCGTGAGCCCTGGGGGCTCAGAATGAGCTCTGACCTCATCAT  250

seq1  CCTGTGAGTCTGGAGACCCCCATGAGCAAAGCCTGCTGACATCAGATAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGAGTCTGGAGACCCCCATGAGCAAAGCCTGCTGACATCAGATAAC  300

seq1  TCTGAAGACCGTAAGATGCTCCTAGCTGCTGGCTTCTGCTTGGTTGCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAGACCGTAAGATGCTCCTAGCTGCTGGCTTCTGCTTGGTTGCTCT  350

seq1  GAGCTGGCAATTTGCAAGGATCGTGTTTAGAAAGTTAAAAAGTTAGATAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGGCAATTTGCAAGGATCGTGTTTAGAAAGTTAAAAAGTTAGATAG  400

seq1  ATCAATCTCTACGTTGGAGAACAAGCAGACAAACCACTTAAAATGGTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATCTCTACGTTGGAGAACAAGCAGACAAACCACTTAAAATGGTGTG  450

seq1  TGTCCGGACCTCATAGAGGACAGACAGTGTGTGTAGATAAAGAATTAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCGGACCTCATAGAGGACAGACAGTGTGTGTAGATAAAGAATTAAAA  500

seq1  AACAAGCAGCATTTCCCCACATTATTATGTTTTCATTTGTTACAAAGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGCAGCATTTCCCCACATTATTATGTTTTCATTTGTTACAAAGAAA  550

seq1  ACGGCTTGGCTTTGGCATATGATTCATGCGCATTTCCTTCAAAAAAGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGCTTGGCTTTGGCATATGATTCATGCGCATTTCCTTCAAAAAAGAAA  600

seq1  AGAAAAGAAAAGAAATGAAATGTAAAGAGGGACAGCCCTCTTTACAACTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGAAAAGAAATGAAATGTAAAGAGGGACAGCCCTCTTTACAACTT  650

seq1  TCAGCCACAATTCTCCAAGGTGGACGATAGTTATTTCTAGAGCTATATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCACAATTCTCCAAGGTGGACGATAGTTATTTCTAGAGCTATATAA  700

seq1  TCCATTGTCGAGTAATGAGCAACCATCGTTGTCTAGGGATCTTCATTTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTGTCGAGTAATGAGCAACCATCGTTGTCTAGGGATCTTCATTTGA  750

seq1  TTATGCCGGGACAAAGATGAATTTGGTAAATTCTAATT-AAAAAAAAGAA  799
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TTATGCCGGGACAAAGATGAATTTGGTAAATTCTAATTAAAAAAAAAGAA  800

seq1  AAAATGTCCACTTAAGAATGGTAG-AAAAAAAGAATGCCTGGTATCTCTA  848
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  AAAATGTCCACTTAAGAATGGTAGAAAAAAAAGAATGCCTGGTATCTCTA  850

seq1  CTGTGTCTATATAGAGAGCTCACAAGTAAATTGCCTTAAAGTAATTGTTG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTCTATATAGAGAGCTCACAAGTAAATTGCCTTAAAGTAATTGTTG  900

seq1  TTAATAACTGTTAGCCTGATGTTACTCACATTCAAAATGGAATTGTTCAC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAACTGTTAGCCTGATGTTACTCACATTCAAAATGGAATTGTTCAC  950

seq1  AG-AACAAGCAAAAA-TTCAGTGGCTCATTATAAATATGTTGATAAT-AA  995
      || |||||||||||| ||||||||||||||||||||||||||||||| ||
seq2  AGAAACAAGCAAAAATTTCAGTGGCTCATTATAAATATGTTGATAATAAA  1000

seq1  ATAA-TTTAATATTCATTAACATTAAGTCTTGAAATTTTCTCTAACTAGT  1044
      |||| ||||||||||||||||||| |||| || ||||||||||| |||||
seq2  ATAATTTTAATATTCATTAACATTTAGTCCTG-AATTTTCTCTACCTAGT  1049

seq1  GACACACACACACACACACATAT  1067
      |||||||||||||||||||||||
seq2  GACACACACACACACACACATAT  1072