BAC Information

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BAC

Clone NameB6Ng01-348D10
Chromosome7 (Build37)
Map Location 97,542,884 - 97,606,252
singlet/doubletdoublet
Overlap geneSytl2, Ccdc89, Crebzf, Tmem126a
Upstream geneFzd4, Prss23, LOC100040001, Me3, Ccdc81, l7Rn6, Eed, E230029C05Rik, EG384719, 2310010J17Rik, Picalm, Ccdc83
Downstream geneTmem126b, B230218P12Rik, LOC666689, LOC621816, LOC100039943, Dlg2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-348D10.bB6Ng01-348D10.g
ACCGA129575GA129576
length1,1641,083
definitionB6Ng01-348D10.b B6Ng01-348D10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(97,605,078 - 97,606,252)(97,542,884 - 97,543,956)
sequence
gaattcacagaaatccccctgcctcaggctactgaattctgggattaagg
cgtacgttatcacgtgcggctcccttacttttgaaccgttagtttttcac
tacattccgttaaccctgtttcacagaagcagtgttctagaggacatggg
gaatgctgaggaaaacaaaacaaaacaaaaaaaaagcactcgctctggaa
ttgctcacgttctgctggaagtcacccacagcataacatggcacaaagat
ccaagagcgagatggagcaaaaagtcaatctcaggctaacttcactgcca
acgttgccttcatcagcccgtagcctagcggctgccatgcaacctacgcc
aggatcggggactcggaagtcgggctgcgtgcccaggcggggtggtgtcg
agcccagccaccgccacaccgctgtttctgcaggctgtacccgggatggg
ctatagcggactcgccagtcctcaccgctagtccacagtttagcgtctcc
tggaccggaagcccgtggacaggaaacagaggcggagacagagtcacgtg
tgagccaaagatggagctcagacgaccctagcgaaggttgcggtagactc
ggcgcgggaggacccgggcaagcaccggcggctggggaggctgccattag
ctgccttcattctgccgaatggtgagtagctgtgccaatgtcgcgctggg
agaggcgcggggtggccacgagggtggggaacgctgtgtgtgctgacccg
gtcttcactttccacccgtgagggggaagacctggctgaattgattgagt
tgaagaatcactgccaatttacaaattgctacgtttaattttccgatgct
tggtttttatgcagaaactttcagagatctttgtagtatttcaaggtgtc
tttgtctttgatggggatttattaactgagaaataataccaggaagaaga
aacaggacttgaatcctgggatcctgatctaaaccgctaaatctgtattt
actttcgaggtaattttaagtcagatttatggaatttgcacatgcagcat
tcaaatcattggttatatacaacaggtacccaggatttggtaagaacatt
gttcagtggctgtccaggctactatacgaatgggtgacccaagacaggct
gatatatcaggtta
gaattcctcactgctgttttccctccttgttctgagtagatgttccttgg
gatgtatttaaaattagtatcctatgctttttaagttttaaagccatatg
ttgaaagttagtgaatgaataatttaaaagacttcagcaacaaatggatg
aatacaacaacactataggttacataagtggggctttacacttaaaaata
taaaatggaattgaaactcgtcagattagctcttattattcctagtttaa
tggtatctttggcaaaagattttgatttttaagaaagctaaagctaaaat
attaagaatgaaaagacttaagcatggtattttatactttggatttcata
gatgttttatgatatatataatatatatcatatgcacatatatatatata
tatatatatatatatatatatatatatatatatatatatataccttctct
agggaatgtaaatatattgaaagagctacaagaaagctcacagtggcgct
gttttccataggtcctgggggtcacacagtggtaaaagatcactttgcca
tcctcttagcacactgctctcttaggtgaagttcactgcagaccaccact
ccatccagaatccccagcaattagcccctagcatccattgcctttgggaa
atgtcacagaccagtgtgtaataagataccatcctcgcctggacatagat
tctgacgttgactcattccaaacttaaaatattctgaccttgactcattc
caaatataaacactgcatatgtgatgtgatgtcttgtagagcgatgacag
agaaaacagacacagcatcagagagcagctaccagctcaggagatacaag
aagagccccagctcattaacccaatcttagcagctcctctggcatgacgt
tctgtggtcctctgtatgtaaacaaaggctccatcttaatctctctctgc
tgctctaaacttgcttcttctatgcccttgctcactggaaagtagccttt
ttgtctagctctaaaaatgtcgtttttctttaatttctaattaaccttcc
cagctagcttattaatatttccaatctcataga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_97605078_97606252
seq2: B6Ng01-348D10.b_55_1218 (reverse)

seq1  TAACCTGATAATAAATCAGCCTGTCTTGGGTCA-CCATTCGTATTAGTTA  49
      |||||||   ||| ||||||||||||||||||| ||||||||| ||| ||
seq2  TAACCTG---ATATATCAGCCTGTCTTGGGTCACCCATTCGTA-TAG-TA  45

seq1  GCTGTGACAG-CACTGGAACAATG-TCTTACCAAATCTTGGGTACCTGTT  97
      ||   ||||| |||| |||||||| |||||||||||| ||||||||||||
seq2  GCCTGGACAGCCACT-GAACAATGTTCTTACCAAATCCTGGGTACCTGTT  94

seq1  GTATATATACAATGATTTGGAAAATGCTGCATGTGCAAAATTCCATAAAT  147
      |||||||  ||||||||||   |||||||||||||| |||||||||||||
seq2  GTATATAACCAATGATTTG---AATGCTGCATGTGC-AAATTCCATAAAT  140

seq1  CTTGACTTAAAAATTAACCTCGAAAGTAAAATACAGATTTAGCGGTTTAG  197
      | ||||||||||  | ||||||||||| ||||||||||||||||||||||
seq2  C-TGACTTAAAA--TTACCTCGAAAGT-AAATACAGATTTAGCGGTTTAG  186

seq1  ATCAGGATCCCAGGATTCAAGTCCTGTTTCTTCTTCCTGGTATTATTTCT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGATCCCAGGATTCAAGTCCTGTTTCTTCTTCCTGGTATTATTTCT  236

seq1  CAGTTAATAAATCCCCATCAAAGACAAAGACACCTTGAAATACTACAAAG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTAATAAATCCCCATCAAAGACAAAGACACCTTGAAATACTACAAAG  286

seq1  ATCTCTGAAAGTTTCTGCATAAAAACCAAGCATCGGAAAATTAAACGTAG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTGAAAGTTTCTGCATAAAAACCAAGCATCGGAAAATTAAACGTAG  336

seq1  CAATTTGTAAATTGGCAGTGATTCTTCAACTCAATCAATTCAGCCAGGTC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTGTAAATTGGCAGTGATTCTTCAACTCAATCAATTCAGCCAGGTC  386

seq1  TTCCCCCTCACGGGTGGAAAGTGAAGACCGGGTCAGCACACACAGCGTTC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCCTCACGGGTGGAAAGTGAAGACCGGGTCAGCACACACAGCGTTC  436

seq1  CCCACCCTCGTGGCCACCCCGCGCCTCTCCCAGCGCGACATTGGCACAGC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCCTCGTGGCCACCCCGCGCCTCTCCCAGCGCGACATTGGCACAGC  486

seq1  TACTCACCATTCGGCAGAATGAAGGCAGCTAATGGCAGCCTCCCCAGCCG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCACCATTCGGCAGAATGAAGGCAGCTAATGGCAGCCTCCCCAGCCG  536

seq1  CCGGTGCTTGCCCGGGTCCTCCCGCGCCGAGTCTACCGCAACCTTCGCTA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGTGCTTGCCCGGGTCCTCCCGCGCCGAGTCTACCGCAACCTTCGCTA  586

seq1  GGGTCGTCTGAGCTCCATCTTTGGCTCACACGTGACTCTGTCTCCGCCTC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCGTCTGAGCTCCATCTTTGGCTCACACGTGACTCTGTCTCCGCCTC  636

seq1  TGTTTCCTGTCCACGGGCTTCCGGTCCAGGAGACGCTAAACTGTGGACTA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCCTGTCCACGGGCTTCCGGTCCAGGAGACGCTAAACTGTGGACTA  686

seq1  GCGGTGAGGACTGGCGAGTCCGCTATAGCCCATCCCGGGTACAGCCTGCA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGTGAGGACTGGCGAGTCCGCTATAGCCCATCCCGGGTACAGCCTGCA  736

seq1  GAAACAGCGGTGTGGCGGTGGCTGGGCTCGACACCACCCCGCCTGGGCAC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAGCGGTGTGGCGGTGGCTGGGCTCGACACCACCCCGCCTGGGCAC  786

seq1  GCAGCCCGACTTCCGAGTCCCCGATCCTGGCGTAGGTTGCATGGCAGCCG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCCGACTTCCGAGTCCCCGATCCTGGCGTAGGTTGCATGGCAGCCG  836

seq1  CTAGGCTACGGGCTGATGAAGGCAACGTTGGCAGTGAAGTTAGCCTGAGA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCTACGGGCTGATGAAGGCAACGTTGGCAGTGAAGTTAGCCTGAGA  886

seq1  TTGACTTTTTGCTCCATCTCGCTCTTGGATCTTTGTGCCATGTTATGCTG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTTTTTGCTCCATCTCGCTCTTGGATCTTTGTGCCATGTTATGCTG  936

seq1  TGGGTGACTTCCAGCAGAACGTGAGCAATTCCAGAGCGAGTGCTTTTTTT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGACTTCCAGCAGAACGTGAGCAATTCCAGAGCGAGTGCTTTTTTT  986

seq1  TTGTTTTGTTTTGTTTTCCTCAGCATTCCCCATGTCCTCTAGAACACTGC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTGTTTTGTTTTCCTCAGCATTCCCCATGTCCTCTAGAACACTGC  1036

seq1  TTCTGTGAAACAGGGTTAACGGAATGTAGTGAAAAACTAACGGTTCAAAA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTGAAACAGGGTTAACGGAATGTAGTGAAAAACTAACGGTTCAAAA  1086

seq1  GTAAGGGAGCCGCACGTGATAACGTACGCCTTAATCCCAGAATTCAGTAG  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGGGAGCCGCACGTGATAACGTACGCCTTAATCCCAGAATTCAGTAG  1136

seq1  CCTGAGGCAGGGGGATTTCTGTGAATTC  1175
      ||||||||||||||||||||||||||||
seq2  CCTGAGGCAGGGGGATTTCTGTGAATTC  1164

seq1: chr7_97542884_97543956
seq2: B6Ng01-348D10.g_66_1148

seq1  GAATTCCTCACTGCTGTTTTCCCTCCTTGTTCTGAGTAGATGTTCCTTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCACTGCTGTTTTCCCTCCTTGTTCTGAGTAGATGTTCCTTGG  50

seq1  GATGTATTTAAAATTAGTATCCTATGCTTTTTAAGTTTTAAAGCCATATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTATTTAAAATTAGTATCCTATGCTTTTTAAGTTTTAAAGCCATATG  100

seq1  TTGAAAGTTAGTGAATGAATAATTTAAAAGACTTCAGCAACAAATGGATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAGTTAGTGAATGAATAATTTAAAAGACTTCAGCAACAAATGGATG  150

seq1  AATACAACAACACTATAGGTTACATAAGTGGGGCTTTACACTTAAAAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAACAACACTATAGGTTACATAAGTGGGGCTTTACACTTAAAAATA  200

seq1  TAAAATGGAATTGAAACTCGTCAGATTAGCTCTTATTATTCCTAGTTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGGAATTGAAACTCGTCAGATTAGCTCTTATTATTCCTAGTTTAA  250

seq1  TGGTATCTTTGGCAAAAGATTTTGATTTTTAAGAAAGCTAAAGCTAAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATCTTTGGCAAAAGATTTTGATTTTTAAGAAAGCTAAAGCTAAAAT  300

seq1  ATTAAGAATGAAAAGACTTAAGCATGGTATTTTATACTTTGGATTTCATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGAATGAAAAGACTTAAGCATGGTATTTTATACTTTGGATTTCATA  350

seq1  GATGTTTTATGATATATATAATATATATCATATGCACATATATATATATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTTTATGATATATATAATATATATCATATGCACATATATATATATA  400

seq1  TATATATATATATATATATATATATATATATATATATATATACCTTCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATATATATATATATATATATATATATATATATACCTTCTCT  450

seq1  AGGGAATGTAAATATATTGAAAGAGCTACAAGAAAGCTCACAGTGGCGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAATGTAAATATATTGAAAGAGCTACAAGAAAGCTCACAGTGGCGCT  500

seq1  GTTTTCCATAGGTCCTGGGGGTCACACAGTGGTAAAAGATCACTTTGCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCCATAGGTCCTGGGGGTCACACAGTGGTAAAAGATCACTTTGCCA  550

seq1  TCCTCTTAGCACACTGCTCTCTTAGGTGAAGTTCACTGCAGACCACCACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTAGCACACTGCTCTCTTAGGTGAAGTTCACTGCAGACCACCACT  600

seq1  CCATCCAGAATCCCCAGCAATTAGCCCCTAGCATCCATTGCCTTTGGGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCAGAATCCCCAGCAATTAGCCCCTAGCATCCATTGCCTTTGGGAA  650

seq1  ATGTCACAGACCAGTGTGTAATAAGATACCATCCTCGCCTGGACATAGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCACAGACCAGTGTGTAATAAGATACCATCCTCGCCTGGACATAGAT  700

seq1  TCTGACGTTGACTCATTCCAAACTTAAAATATTCTGACCTTGACTCATTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACGTTGACTCATTCCAAACTTAAAATATTCTGACCTTGACTCATTC  750

seq1  CAAATATAAACACTGCATATGTGATGTGATGTCTTGTAGAGCGATGACAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATATAAACACTGCATATGTGATGTGATGTCTTGTAGAGCGATGACAG  800

seq1  AG-AAACAGACACAGCATCAGAGAGCAGCTACCAGCTCAGGAGATACAAG  849
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAACAGACACAGCATCAGAGAGCAGCTACCAGCTCAGGAGATACAAG  850

seq1  AAGAGCCCCAGCTCATTAA-CCAATCTTAGCAGCTCCTCTGGCATGACGT  898
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AAGAGCCCCAGCTCATTAACCCAATCTTAGCAGCTCCTCTGGCATGACGT  900

seq1  CC--TTGTCCTCTGTATGTAAACAAAGGCTCCATCTTAATCTCTCTCTGC  946
       |  | ||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGGTCCTCTGTATGTAAACAAAGGCTCCATCTTAATCTCTCTCTGC  950

seq1  TGCTCTAAACTTTGCTCTTCTATGCCCTTGCTCACTGGAAAGTAGCC-TT  995
      ||||||||||||   |||||||||||||||||||||||||||||||| ||
seq2  TGCTCTAAACTTGCTTCTTCTATGCCCTTGCTCACTGGAAAGTAGCCTTT  1000

seq1  TTGTCTTAGCTCT-AAAATGTCGTTTTTCTTTAATTTCTAATT-ACCTT-  1042
      ||||| ||||||| ||||||||||||||||||||||||||||| ||||| 
seq2  TTGTC-TAGCTCTAAAAATGTCGTTTTTCTTTAATTTCTAATTAACCTTC  1049

seq1  CCAGCTAGC-TAT--ATATTCCAATTCTCATAGA  1073
      ||||||||| |||  ||||| | | |||||||||
seq2  CCAGCTAGCTTATTAATATTTCCAATCTCATAGA  1083