BAC Information

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BAC

Clone NameB6Ng01-348D11
Chromosome7 (Build37)
Map Location 77,552,316 - 77,694,915
singlet/doubletdoublet
Overlap geneB130024G19Rik, LOC100042838, LOC665486, LOC100041957
Upstream geneEG665410, Nr2f2, LOC100042833
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-348D11.bB6Ng01-348D11.g
ACCGA129577GA129578
length981959
definitionB6Ng01-348D11.b B6Ng01-348D11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(77,693,936 - 77,694,915)(77,552,316 - 77,553,262)
sequence
gaattcaatttaatttttcatttacttacatttacatttgctggtcttag
taggagtttattgtaagcaaacatggaaaagaaagaagaggatctctgtg
gatattgttaattgtgcaacagctgtctctatgtatcatgaattttctct
tggccactagaatcattatatattggagcagcatcatgctcaaattcctt
taactgtatttctctgtgtctttggtcgatcaagatagttgtgtaacact
cctctggtctcctctacatatgccaagatttctaggtggagctttttgga
aattttccctgtaaaaagttgtggactcaattggcatttgccaaccgatc
ttctcccttcttgcttgatatcagaaagcttctagcagctaacatgggaa
cataagaatgagcatcacagaggtactacagacccttccattagtctgtc
tagctgtgagtgtgggcaacatacctagataaaattgattgagcttacaa
ttaaacccagaaaggcgttagagctcagacacgatcattggattaagata
aggcctaagtatagagattgttccaccaggaaaaatttataccatataca
aacaaaatggcttcaacaaagaggacagggcagtgacctgtaaagacagc
tctgaactttgactctttgctgagcctgaggaaatccaggtggagataga
taagaatttaggagagaaattatggtggcccagaccttcgggtagaggag
ataagtaaaataacaagaatggatgagtttgcttaaagataaagtatcaa
acaaagaatggtcgatagagggggaaatcctgagaaaggaatgtctggca
agagaaagggttcctcagctggcaggaagcaggcagaaagccagcgaggt
ttccaaggttaatgtgtaatggcaagggataaagataacagaaaagcgtc
actgggtgggttgtgaggggtgggggatgaa

gaattccaaaggtgtgttatacgctgctttaaaaacatttcctctattcg
ttttaaatttgttgccttttaacgtcgcagcgtggccggcgctctggcct
taagtggaacaggttaaaggcagagctgcacgtccccccagcactttctc
cgtcttctctcagtattttctgtcttgtcacttataaccgtgattaagcg
agatgatttgactaagtggttttatgctacctgggacacagagaaggcat
tggctcaaaagctttccttgatactcagtatgatttattagataaatatt
tacccagtacctatttgagtaggaactgtttcagttttggagagacatct
ttgaataagactaggccattgttcagtaggacctgaattttcttgggagg
aaatgggcagtaacgtgtgtgtaaattattaggtgccatttaagggtcaa
aaaagatctatccaccctccacatcctcaaagtctaccagacttggcctg
gtttcttgctgttccccccaccccctataatctgtagcactataattatt
tacatagcatttacattgcattaagtattacaagctatctgcaaatgatt
aacgtgcatgcaagcatgtgcataaattatatcaagttccatatcatgca
atggaagggacttcaacatcatgtgattttagggtctttgggtgagggag
tgttttttttttgaaaagggggtggttgggccaggccacctatcagtcat
ctatgtgacatctgtggctgtgtgttattttgttgagtatgcgaatgaat
ccagacgaagaaaggtcatttttagtttaacgttggtcatcactagatct
gggaggaaaaagttctcttaatgctttcttattacttctctagagtgtgg
gagtacacaagtgatgggaattaagacagaatatattctatagttgccag
acctaggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_77693936_77694915
seq2: B6Ng01-348D11.b_47_1026 (reverse)

seq1  TCATCCCC--ACCCTCAC-ACCCACCCAGTGACGCCTTTTCTGTTATCTT  47
      ||||||||   ||||||| ||||||||||||||| |||||||||||||||
seq2  TCATCCCCCACCCCTCACAACCCACCCAGTGACG-CTTTTCTGTTATCTT  49

seq1  TATCCCTTGCCATTACACATTAACCTTGGAAACCTCGCTGGCTTTCTGCC  97
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCCTTGCCATTACACATTAACCTTGGAAACCTCGCTGGCTTTCTGCC  99

seq1  TGCTTCCCTGCCAGCCTGAGGAACCCTTTCTCTTGCCAGACATTCCTTTC  147
      ||||| |||||||| |||||||||||||||||||||||||||||||||||
seq2  TGCTT-CCTGCCAG-CTGAGGAACCCTTTCTCTTGCCAGACATTCCTTTC  147

seq1  TCAGGATTTCCCCCTCTATCGACCATTCTTTGTTTGATACTTTATCTTTA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGATTTCCCCCTCTATCGACCATTCTTTGTTTGATACTTTATCTTTA  197

seq1  AGCAAACTCATCCATTCTTGTTATTTTACTTATCTCCTCTACCCGAAGGT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAACTCATCCATTCTTGTTATTTTACTTATCTCCTCTACCCGAAGGT  247

seq1  CTGGGCCACCATAATTTCTCTCCTAAATTCTTATCTATCTCCACCTGGAT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCCACCATAATTTCTCTCCTAAATTCTTATCTATCTCCACCTGGAT  297

seq1  TTCCTCAGGCTCAGCAAAGAGTCAAAGTTCAGAGCTGTCTTTACAGGTCA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCAGGCTCAGCAAAGAGTCAAAGTTCAGAGCTGTCTTTACAGGTCA  347

seq1  CTGCCCTGTCCTCTTTGTTGAAGCCATTTTGTTTGTATATGGTATAAATT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCTGTCCTCTTTGTTGAAGCCATTTTGTTTGTATATGGTATAAATT  397

seq1  TTTCCTGGTGGAACAATCTCTATACTTAGGCCTTATCTTAATCCAATGAT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTGGTGGAACAATCTCTATACTTAGGCCTTATCTTAATCCAATGAT  447

seq1  CGTGTCTGAGCTCTAACGCCTTTCTGGGTTTAATTGTAAGCTCAATCAAT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTCTGAGCTCTAACGCCTTTCTGGGTTTAATTGTAAGCTCAATCAAT  497

seq1  TTTATCTAGGTATGTTGCCCACACTCACAGCTAGACAGACTAATGGAAGG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCTAGGTATGTTGCCCACACTCACAGCTAGACAGACTAATGGAAGG  547

seq1  GTCTGTAGTACCTCTGTGATGCTCATTCTTATGTTCCCATGTTAGCTGCT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTAGTACCTCTGTGATGCTCATTCTTATGTTCCCATGTTAGCTGCT  597

seq1  AGAAGCTTTCTGATATCAAGCAAGAAGGGAGAAGATCGGTTGGCAAATGC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCTTTCTGATATCAAGCAAGAAGGGAGAAGATCGGTTGGCAAATGC  647

seq1  CAATTGAGTCCACAACTTTTTACAGGGAAAATTTCCAAAAAGCTCCACCT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTGAGTCCACAACTTTTTACAGGGAAAATTTCCAAAAAGCTCCACCT  697

seq1  AGAAATCTTGGCATATGTAGAGGAGACCAGAGGAGTGTTACACAACTATC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATCTTGGCATATGTAGAGGAGACCAGAGGAGTGTTACACAACTATC  747

seq1  TTGATCGACCAAAGACACAGAGAAATACAGTTAAAGGAATTTGAGCATGA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCGACCAAAGACACAGAGAAATACAGTTAAAGGAATTTGAGCATGA  797

seq1  TGCTGCTCCAATATATAATGATTCTAGTGGCCAAGAGAAAATTCATGATA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCTCCAATATATAATGATTCTAGTGGCCAAGAGAAAATTCATGATA  847

seq1  CATAGAGACAGCTGTTGCACAATTAACAATATCCACAGAGATCCTCTTCT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGAGACAGCTGTTGCACAATTAACAATATCCACAGAGATCCTCTTCT  897

seq1  TTCTTTTCCATGTTTGCTTACAATAAACTCCTACTAAGACCAGCAAATGT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTCCATGTTTGCTTACAATAAACTCCTACTAAGACCAGCAAATGT  947

seq1  AAATGTAAGTAAATGAAAAATTAAATTGAATTC  980
      |||||||||||||||||||||||||||||||||
seq2  AAATGTAAGTAAATGAAAAATTAAATTGAATTC  980


seq1: chr7_77552316_77553262
seq2: B6Ng01-348D11.g_66_1024

seq1  GAATTCCAAAGGTGTGTTATACGCTGCTTTAAAAACATTTCCTCTATTCG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAAGGTGTGTTATACGCTGCTTTAAAAACATTTCCTCTATTCG  50

seq1  TTTTAAATTTGTTGCCTTTTAACGTCGCAGCGTGGCCGGCGCTCTGGCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAATTTGTTGCCTTTTAACGTCGCAGCGTGGCCGGCGCTCTGGCCT  100

seq1  TAAGTGGAACAGGTTAAAGGCAGAGCTGCACGTCCCCCCAGCACTTTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGGAACAGGTTAAAGGCAGAGCTGCACGTCCCCCCAGCACTTTCTC  150

seq1  CGTCTTCTCTCAGTATTTTCTGTCTTGTCACTTATAACCGTGATTAAGCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCTTCTCTCAGTATTTTCTGTCTTGTCACTTATAACCGTGATTAAGCG  200

seq1  AGATGATTTGACTAAGTGGTTTTATGCTACCTGGGACACAGAGAAGGCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGATTTGACTAAGTGGTTTTATGCTACCTGGGACACAGAGAAGGCAT  250

seq1  TGGCTCAAAAGCTTTCCTTGATACTCAGTATGATTTATTAGATAAATATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCAAAAGCTTTCCTTGATACTCAGTATGATTTATTAGATAAATATT  300

seq1  TACCCAGTACCTATTTGAGTAGGAACTGTTTCAGTTTTGGAGAGACATCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCAGTACCTATTTGAGTAGGAACTGTTTCAGTTTTGGAGAGACATCT  350

seq1  TTGAATAAGACTAGGCCATTGTTCAGTAGGACCTGAATTTTCTTGGGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATAAGACTAGGCCATTGTTCAGTAGGACCTGAATTTTCTTGGGAGG  400

seq1  AAATGGGCAGTAACGTGTGTGTAAATTATTAGGTGCCATTTAAGGGTCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGGCAGTAACGTGTGTGTAAATTATTAGGTGCCATTTAAGGGTCAA  450

seq1  AAAAGATCTATCCACCCTCCACATCCTCAAAGTCTACCAGACTTGGCCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGATCTATCCACCCTCCACATCCTCAAAGTCTACCAGACTTGGCCTG  500

seq1  GTTTCTTGCTGTTCCCCCCACCCCCTATAATCTGTAGCACTATAATTATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTTGCTGTTCCCCCCACCCCCTATAATCTGTAGCACTATAATTATT  550

seq1  TACATAGCATTTACATTGCATTAAGTATTACAAGCTATCTGCAAATGATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAGCATTTACATTGCATTAAGTATTACAAGCTATCTGCAAATGATT  600

seq1  AACGTGCATGCAAGCATGTGCATAAATTATATCAAGTTCCATATCATGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTGCATGCAAGCATGTGCATAAATTATATCAAGTTCCATATCATGCA  650

seq1  ATGGAAGGGACTTCAACATCATGTGATTTTAGGGTCTTTGGGTGAGGGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAGGGACTTCAACATCATGTGATTTTAGGGTCTTTGGGTGAGGGAG  700

seq1  TGTTTTTTTTTTGAAAAGGGGGTGGTTGGGCCAGGCCACCTATCAGTCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTTTTTTGAAAAGGGGGTGGTTGGGCCAGGCCACCTATCAGTCAT  750

seq1  CTATGTGACATCTGTGGCTGTGTGTTA-TTTGTTGAGTATGCGAATGAAT  799
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CTATGTGACATCTGTGGCTGTGTGTTATTTTGTTGAGTATGCGAATGAAT  800

seq1  CCAGACGAAGAAAGGTCA-TTTTAG-TTAACGTT-GTCA-CACTAGATCT  845
      |||||||||||||||||| |||||| |||||||| |||| ||||||||||
seq2  CCAGACGAAGAAAGGTCATTTTTAGTTTAACGTTGGTCATCACTAGATCT  850

seq1  GGGAGG-AAAAGTTCTC-TAATGC-TTCTTATAAC-TCCCAAGAGTGTTG  891
      |||||| |||||||||| |||||| ||||||| || || | ||||||| |
seq2  GGGAGGAAAAAGTTCTCTTAATGCTTTCTTATTACTTCTCTAGAGTGTGG  900

seq1  GAGTACACAAAGGATGGG-ATTTAGACAGAA-AGATTC--TAGTTGCAAG  937
      ||||||||||  |||||| ||| |||||||| | ||||  ||||||| ||
seq2  GAGTACACAAGTGATGGGAATTAAGACAGAATATATTCTATAGTTGCCAG  950

seq1  ACCTAAGGTG  947
      |||| |||||
seq2  ACCT-AGGTG  959


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