BAC Information

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BAC

Clone NameB6Ng01-348H19
Chromosome7 (Build37)
Map Location 65,396,855 - 65,397,930
singlet/doubletsinglet
Overlap genenone
Upstream geneGabrg3, Gabra5, Gabrb3, EG668807, LOC434189
Downstream geneAtp10a, LOC621446, LOC668811, LOC668813, LOC668815
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-348H19.bB6Ng01-348H19.g
ACCGA129770GA129771
length1,2091,072
definitionB6Ng01-348H19.b B6Ng01-348H19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctatctccttctcagcccacaaatcttcccctgactcttccaaa
agagcccccaaggtccatccaacctttgtctgtgtcagctgctggatgga
gcctctcagagcccctcagaggacagccacattagccttctgtatacagg
taaaacagagtatcattaatggaatcagggattggtggttacgcatggga
tggaatgtgactctagttgggtcagttattttgtggtccttccctcagtc
tttactctgtccctgaatttcttgtattgggtcaaaccttttgtgggtag
gtgggtgtctgtttcactgcactggagtttttgcttggctacaggaggtg
gcctcttttggtttgatatctacactgctgtgaaactcagtaaagtcacc
atcactgattcttaggagcctcccctattccaggtcttctggagcgtcct
tatcccttctcccacctagttccctccctccatctgtctgctacgattat
ttttccctattctaagagagattcaagcatgcacacttgggccttaattc
ttgtttataagtgggagcataccatgtatgtcttttgggtctgggttaca
tcactcaggatgttattctcaactttcatccatttgcctaaaaataaatt
aatgatgccttggtttttaatagctgaatagtattccattgtgtagatgt
accacattttcctcctccattcttcagttgaggaacatctagtttttttc
cagtttctggctattatgaataaatctgctatgaacatagctgagcatgt
gtctttgtgggatggtggagcatgtttttggtatattcccaggagtggta
tagctagttattgagctagaagtattcctaccaggttgatttcctacatg
tttgtactcccaccggtgatggaggagtgtttcccttgcttccagatctt
tgccagcatgtgctatcacttgagttttgatcttagccattctgaaccat
atgagatggatcttagagttgctttgatgtgcatttcctgatgactagga
cttctttagtgctgtgacattcaggatcttttgttgaaaattttcgattt
ttcttgtgcccatctttaagtggtactgctgtgggttaacttctgactta
agttggcaatctagtctctgtccgaaagtaagatttggtgtgaaatatct
tactcgcat
gaattcttatgttttctcttcaaacacctgattgtgcttctgtaaagtca
ctagccattaatgaccttggtttggaaactagtgctcttctaagtatttc
ttaattattcattggttcctttacttttactgtgaaggaggggcttattg
tgccttagagaccctggaaacagtccattgcgacagaaaggtacagtggc
agaagaagcaggcatctgcagctaggaagcaagcagagaacaatagatgt
ctgtgccaactccctttctattttcgacttagtccagaattcaatcccat
tgattcctgctgcctgtatttagtatggttcttgctgccttcattaacat
aatctaaagtgtccaagagacatagtgtggtgttttgattgataatggct
cccataggttgatatttgggttcctattctctagtaggtgtaactgttta
ttaaggattagaaggtatggctttgttggaggtagtgtgtcactggggaa
aaactttgagatttcaaatgttttctgccatttgcagtgtgtgctctgtt
ttctgcttgctgttttaaatgtgggttttcagctactgctccagccacat
gttacctccacctcatctctacctcctgcctctgttctaccatcaagact
ccaactcgggagtcataagccccagagaaactcttctgtaagtttctctg
gtcattgtatcttataacaggagtagaaacataaccaatacacatggcca
aaggtttctttttgcctcctgaataattctaggttccatcaagttgataa
acataaaccaatttgttatagaaattaattatataataggagaaacttca
accctctctactgcttggcttccttcgaatgcagtctttaaatagaaagc
aagatgagttattcattcttcctcattattactgctttaaaaaatttatt
gatgctctctcatgtagtgtggtaactagtgataaaaattatttatggtt
tatttttaaagtcctagagaaaataatatgtacattcagtaatattacag
aataaggctagatcagagttaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_65396855_65397930
seq2: B6Ng01-348H19.g_64_1135 (reverse)

seq1  TTAACTCTGATCCCTTAGCTTTA-TCTGTAATA-TACTGGAATTGTACAT  48
      ||||||||||||   |||| ||| ||||||||| |||||  | |||||||
seq2  TTAACTCTGATC---TAGCCTTATTCTGTAATATTACTG--AATGTACAT  45

seq1  A-TATTTCTCCTAGGCTTTTAAAAATAAACCATAAATTAATTTTTATCAC  97
      | |||||   |||||  ||||||||||||||||||| |||||||||||||
seq2  ATTATTTTCTCTAGGACTTTAAAAATAAACCATAAA-TAATTTTTATCAC  94

seq1  TAGTTACCACACTACATGAGAGAGCATCAATAAATTTTTTAAAGCAGTAA  147
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TAGTTACCACACTACATGAGAGAGCATCAATAAATTTTTTAAAGCAGT-A  143

seq1  ATAATGAGG-AGAATGAATAACTCATCTTGCTTTTCTATTTAAAGACTGC  196
      ||||||||| ||||||||||||||||||||| ||||||||||||||||||
seq2  ATAATGAGGAAGAATGAATAACTCATCTTGC-TTTCTATTTAAAGACTGC  192

seq1  ATTCGAAGGAAGCCAAGCAGTAGAGAGGGTTGAAGTTTCTCCTATTATAT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCGAAGGAAGCCAAGCAGTAGAGAGGGTTGAAGTTTCTCCTATTATAT  242

seq1  AATTAATTTCTATAACAAATTGGTTTATGTTTATCAACTTGATGGAACCT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAATTTCTATAACAAATTGGTTTATGTTTATCAACTTGATGGAACCT  292

seq1  AGAATTATTCAGGAGGCAAAAAGAAACCTTTGGCCATGTGTATTGGTTAT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTATTCAGGAGGCAAAAAGAAACCTTTGGCCATGTGTATTGGTTAT  342

seq1  GTTTCTACTCCTGTTATAAGATACAATGACCAGAGAAACTTACAGAAGAG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTACTCCTGTTATAAGATACAATGACCAGAGAAACTTACAGAAGAG  392

seq1  TTTCTCTGGGGCTTATGACTCCCGAGTTGGAGTCTTGATGGTAGAACAGA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTGGGGCTTATGACTCCCGAGTTGGAGTCTTGATGGTAGAACAGA  442

seq1  GGCAGGAGGTAGAGATGAGGTGGAGGTAACATGTGGCTGGAGCAGTAGCT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGAGGTAGAGATGAGGTGGAGGTAACATGTGGCTGGAGCAGTAGCT  492

seq1  GAAAACCCACATTTAAAACAGCAAGCAGAAAACAGAGCACACACTGCAAA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACCCACATTTAAAACAGCAAGCAGAAAACAGAGCACACACTGCAAA  542

seq1  TGGCAGAAAACATTTGAAATCTCAAAGTTTTTCCCCAGTGACACACTACC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGAAAACATTTGAAATCTCAAAGTTTTTCCCCAGTGACACACTACC  592

seq1  TCCAACAAAGCCATACCTTCTAATCCTTAATAAACAGTTACACCTACTAG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACAAAGCCATACCTTCTAATCCTTAATAAACAGTTACACCTACTAG  642

seq1  AGAATAGGAACCCAAATATCAACCTATGGGAGCCATTATCAATCAAAACA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAGGAACCCAAATATCAACCTATGGGAGCCATTATCAATCAAAACA  692

seq1  CCACACTATGTCTCTTGGACACTTTAGATTATGTTAATGAAGGCAGCAAG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACTATGTCTCTTGGACACTTTAGATTATGTTAATGAAGGCAGCAAG  742

seq1  AACCATACTAAATACAGGCAGCAGGAATCAATGGGATTGAATTCTGGACT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATACTAAATACAGGCAGCAGGAATCAATGGGATTGAATTCTGGACT  792

seq1  AAGTCGAAAATAGAAAGGGAGTTGGCACAGACATCTATTGTTCTCTGCTT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCGAAAATAGAAAGGGAGTTGGCACAGACATCTATTGTTCTCTGCTT  842

seq1  GCTTCCTAGCTGCAGATGCCTGCTTCTTCTGCCACTGTACCTTTCTGTCG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCTAGCTGCAGATGCCTGCTTCTTCTGCCACTGTACCTTTCTGTCG  892

seq1  CAATGGACTGTTTCCAGGGTCTCTAAGGCACAATAAGCCCCTCCTTCACA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGACTGTTTCCAGGGTCTCTAAGGCACAATAAGCCCCTCCTTCACA  942

seq1  GTAAAAGTAAAGGAACCAATGAATAATTAAGAAATACTTAGAAGAGCACT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAGTAAAGGAACCAATGAATAATTAAGAAATACTTAGAAGAGCACT  992

seq1  AGTTTCCAAACCAAGGTCATTAATGGCTAGTGACTTTACAGAAGCACAAT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCCAAACCAAGGTCATTAATGGCTAGTGACTTTACAGAAGCACAAT  1042

seq1  CAGGTGTTTGAAGAGAAAACATAAGAATTC  1076
      ||||||||||||||||||||||||||||||
seq2  CAGGTGTTTGAAGAGAAAACATAAGAATTC  1072