BAC Information

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BAC

Clone NameB6Ng01-349K10
Chromosome7 (Build37)
Map Location 76,485,995 - 76,487,116
singlet/doubletsinglet
Overlap genenone
Upstream geneEG434197, LOC100041800, EG384639, Arrdc4, LOC384741
Downstream geneEG665410
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-349K10.bB6Ng01-349K10.g
ACCGA130579GA130580
length1,1101,223
definitionB6Ng01-349K10.b B6Ng01-349K10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgcatagacagtcagtatgcaccatgatatgtgcatatgaatac
ccccagaagaataagctgttgagtattccctaaccattttggctcatgta
tttctgtgtactttcagcttaggttaataggtataattagcagaaaatct
taatctacaattgtttcaaacattgttgtcccaaagcatcatattcatag
gattgtaacataaagtgtcctttccaattttcttttgtactaacgaaaag
gtaaaatatataaatgtttgcacattaaagttttgtatatgtgcaaaacc
aaaagctttttacataagtaaatgaaatacacattcagaagaatatgaag
agttgttatgtcttatataaaaagtatttttgtgatttatgaaatataca
taaaattattaaatttttcattgaattaaatcatgaatttctcagtgact
cattgttcgcttagacatttggtttcttgaaaactagaagtgacacactg
atgacatgcagcttgtgagaagagcgacaaattggttatcactggatatc
aagaacacaactctatctgaactattcttgatgctgtacatgaatgtgct
tcataggttgtgtgtatgtatatgtgtgtgctttgtcattttctgatgaa
ccaaaatagctcataatattgagaatgggacaatggctctatgtaaatgg
gattttattgttttctcagaatttttacataatcaaagaatgtaggaagg
tgtgagattttaccaaaaaaaattgatatgagtttaataatcataaaaga
cagtctacttgatttggacaaatctcatctccttaattcactatctcagt
agggccctcacagttttgatacagatttaatattatattgtagagctctg
gatgggaagtcaatatttagaggtacccctttagtcttatggagatattt
cacttgaaattgacactaaagagactaaacaaataaataaacaaacatga
caaaggagagaagtctgatatcatcctccagctctcacttgaatcatatt
tcttctcaggcaaaacagtaaataatcatggacttgggacccatgcaaaa
caagatgctt

gaattctcagtggaaataataaaaatggttaagaaatacctcaaaacatg
ttcatccttagcaaaggggaaaagccaaattaaaataactctgagacttc
agtttactcagtgtaggaatggctaagttcaaggaaaccaatgataggaa
ggttgtagaaagtatgaacactaatttgctgggaatacaaatctgtgaag
aaactctggaaatccaaattgacagtgctaacaaggctgaaagtaactat
agcctatgacctgtttgcaccctccttggtatatgcccccaaagacttga
agtcttactctactgataagtgatcagcaatgttttttgctaccctattc
ctaataatagaaacgaccagaatatccttcaacaggatgcatatcaaaat
tgaatgcatatcaaaattgtggtatatatagacagtaagatgtaattcag
atgtaaagacaaattaaacaattgtatttcaaataaatggatagaacaac
aacaacaaaaaggagtatattgaatgagttggcccaggtccagaaagaca
aacactgaccgttttctctcatttttccatcctagctctaaatcttcaga
tgtgagtatacaatacaaagtaaccacagaaaccaagaaattataaaggg
agcataggcaggggaagggcacctggagagggaagcagctgggtacaggt
gatatgaattaagaacctggaaaatatggaggcttataggacaggagggg
gaggatggaaaaatgtgaggggtgctacaaataggaaagggaggggcatt
aatatagaagaagaatggatgactagtgacaaacaacaccaaggctgatt
tattaaatgctcaaaggatcatattattttatctaaaattatatacaagt
aatctaaatgcttgttcacacacacacacacacacacacacacacacaca
cacacaaatccatgtatatccaacaccacaaactaacaaatcccatatcc
accatgagaacatgctttaaatattttgtcagatactccaaatgactctc
aatatgtcaatatgggtatggtgctggttgcactcagatagaataagccc
cttatactggaagaactttcacacttgaatactgaaccagatgaacaatg
gccatggactgaagctcctattgagttcagctcatgggtgccagaagacc
cacatagtgagaacggcgtgctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_76485995_76487116
seq2: B6Ng01-349K10.b_48_1157

seq1  GAATTCTGCATAGACAGTCAGTATGCACCATGATATGTGCATATGAATAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCATAGACAGTCAGTATGCACCATGATATGTGCATATGAATAC  50

seq1  CCCCAGAAGAATAAGCTGTTGAGTATTCCCTAACCATTTTGGCTCATGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGAAGAATAAGCTGTTGAGTATTCCCTAACCATTTTGGCTCATGTA  100

seq1  TTTCTGTGTACTTTCAGCTTAGGTTAATAGGTATAATTAGCAGAAAATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTGTACTTTCAGCTTAGGTTAATAGGTATAATTAGCAGAAAATCT  150

seq1  TAATCTACAATTGTTTCAAACATTGTTGTCCCAAAGCATCATATTCATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTACAATTGTTTCAAACATTGTTGTCCCAAAGCATCATATTCATAG  200

seq1  GATTGTAACATAAAGTGTCCTTTCCAATTTTCTTTTGTACTAACGAAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTAACATAAAGTGTCCTTTCCAATTTTCTTTTGTACTAACGAAAAG  250

seq1  GTAAAATATATAAATGTTTGCACATTAAAGTTTTGTATATGTGCAAAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAATATATAAATGTTTGCACATTAAAGTTTTGTATATGTGCAAAACC  300

seq1  AAAAGCTTTTTACATAAGTAAATGAAATACACATTCAGAAGAATATGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCTTTTTACATAAGTAAATGAAATACACATTCAGAAGAATATGAAG  350

seq1  AGTTGTTATGTCTTATATAAAAAGTATTTTTGTGATTTATGAAATATACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTTATGTCTTATATAAAAAGTATTTTTGTGATTTATGAAATATACA  400

seq1  TAAAATTATTAAATTTTTCATTGAATTAAATCATGAATTTCTCAGTGACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTATTAAATTTTTCATTGAATTAAATCATGAATTTCTCAGTGACT  450

seq1  CATTGTTCGCTTAGACATTTGGTTTCTTGAAAACTAGAAGTGACACACTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTTCGCTTAGACATTTGGTTTCTTGAAAACTAGAAGTGACACACTG  500

seq1  ATGACATGCAGCTTGTGAGAAGAGCGACAAATTGGTTATCACTGGATATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACATGCAGCTTGTGAGAAGAGCGACAAATTGGTTATCACTGGATATC  550

seq1  AAGAACACAACTCTATCTGAACTATTCTTGATGCTGTACATGAATGTGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACACAACTCTATCTGAACTATTCTTGATGCTGTACATGAATGTGCT  600

seq1  TCATAGGTTGTGTGTATGTATATGTGTGTGCTTTGTCATTTTCTGATGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGGTTGTGTGTATGTATATGTGTGTGCTTTGTCATTTTCTGATGAA  650

seq1  CCAAAATAGCTCATAATATTGAGAATGGGACAATGGCTCTATGTAAATGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAATAGCTCATAATATTGAGAATGGGACAATGGCTCTATGTAAATGG  700

seq1  GATTTTATTGTTTTCTCAGAATTTTTACATAATCAAAGAATGTAGGAAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTATTGTTTTCTCAGAATTTTTACATAATCAAAGAATGTAGGAAGG  750

seq1  TGTGAGATTTTACCAAAAAAAATTGATATGAGTTTAATAATCATAAAAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGATTTTACCAAAAAAAATTGATATGAGTTTAATAATCATAAAAGA  800

seq1  CAGTCTACTTGATTTGGACAAATCTCATCTCCTTAATTCACTATCTCAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTACTTGATTTGGACAAATCTCATCTCCTTAATTCACTATCTCAGT  850

seq1  AGGGCCCTCACAGTTTTGATACAGATTTAATATTATATTGTAGAGCTCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCCCTCACAGTTTTGATACAGATTTAATATTATATTGTAGAGCTCTG  900

seq1  GATGGGAAGTCAATATTTAGAGGTACCCCTTTAGTCTTATGGAGATATTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGGAAGTCAATATTTAGAGGTACCCCTTTAGTCTTATGGAGATATTT  950

seq1  CACTTGAAATTGACACTAAAGAGACTAAAACAAAATAAAATAAACAAACA  1000
      |||||||||||||||||||||||||| |||||||   |||||||||||| 
seq2  CACTTGAAATTGACACTAAAGAGACT-AAACAAA--TAAATAAACAAAC-  996

seq1  ATGACAAAGGAGAGAAAGTCTGATATCATCCTCCAGCCTCTCCACCTGAA  1050
      |||||||||||||| ||||||||||||||||||||| |||| ||| ||||
seq2  ATGACAAAGGAGAG-AAGTCTGATATCATCCTCCAG-CTCT-CACTTGAA  1043

seq1  TTCATAATTTCTTCTCAGGCAAAACAGTAAATAAATTCATGGACTTGGGA  1100
       |||| ||||||||||||||||||||||||||||  ||||||||||||||
seq2  -TCAT-ATTTCTTCTCAGGCAAAACAGTAAATAA--TCATGGACTTGGGA  1089

seq1  CCCATGCAAAAACAAGATGCTT  1122
      ||||||| ||||||||||||||
seq2  CCCATGC-AAAACAAGATGCTT  1110


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