BAC Information

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BAC

Clone NameB6Ng01-349M14
Chromosome7 (Build37)
Map Location 111,483,159 - 111,484,303
singlet/doubletsinglet
Overlap geneTrim34
Upstream geneOlfr599, Olfr600, Olfr601, Olfr602-ps1, Olfr604, Olfr596-ps1, Dub2, Olfr605, Olfr606, EG546989, Olfr608, Olfr609, Olfr610, Olfr611, EG545985, Olfr614, Olfr615, Olfr616, LOC100042167, Olfr617, Olfr618, Olfr619, Olfr620, LOC667639, Olfr622, Olfr623, Olfr624, Olfr625-ps1, Olfr261-ps1, Olfr260-ps1, Olfr627, Olfr1526-ps1, Olfr629, Olfr630, Olfr69, Olfr68, Olfr67, Hbb-b1, EG436003, Hbb-bh1, Hbb-y, Olfr66, Olfr64, Olfr65, Olfr631, Olfr632, Olfr633, Olfr634-ps1, LOC233614, Olfr635, Olfr636-ps1, Olfr637-ps1, Olfr638, Olfr639, Olfr640, Olfr641, Olfr642, Olfr643, Olfr644, Olfr645, Olfr646, 4931431F19Rik, Ubqln3, Ubqlnl, E030002O03Rik, Olfr647-ps1, Olfr648, Olfr649, Olfr650-ps1, Trim6, LOC667497, EG667823, Trim12
Downstream gene9230105E10Rik, A530023O14Rik, EG434219, LOC100041595, Trim30, AI451617, LOC672495, LOC625305, EG625321, Olfr651, Olfr652, Olfr653, Olfr654, Olfr655, Olfr656, Olfr657, Olfr658, LOC667882, Olfr659, GA_x5J8B7W3SPQ-80592-80214, Olfr661, LOC625495, Olfr662-ps1, Olfr663, Olfr664, EG625530, LOC100042613, LOC233637, Dub1a, Dub1, Olfr665, Olfr666, Olfr667, Olfr668, Olfr669, EG545987, Olfr670, Olfr671, Olfr672, GA_x5J8B7W6B6J-189947-189022, Olfr674-ps1, Olfr675, Olfr676, Olfr677, LOC667987, Olfr678, Olfr679, Olfr680-ps1, Olfr681, Olfr682-ps1, Olfr683, Olfr684, Olfr685, Olfr686, EG668035, Olfr688, Olfr689, Olfr690
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-349M14.bB6Ng01-349M14.g
ACCGA130670GA130671
length1,2241,144
definitionB6Ng01-349M14.b B6Ng01-349M14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattctttttaatagctgagtagtactccattgtgtaaatgtacc
acattttctgtatccattcctctgttgagggacatctgggttctttccag
cttctggctattataaataaggctgctatgaacatagtggagcatgtgtc
cttcttactggttgggacatcttctggatatatgcccaggagaggtattg
cgggatcctccggtagtactatgtccaattttctgaggaaccgccagact
gatttccagactggttgtacaagcttgcaatcccaccaacaatggaggag
tgttcctctttctccacatcctcgccagcatctgctgtcacctgaatttt
tgatcttagccattctgactggtgtgagatggaatctcagggttgttttg
gtttgcatttctctgatgattaaggatgtagaacattttttcaggtgttt
ctcagcctttcggtattcctcgggtgagaatcctttgttcacctctgagc
cccatcatttaagggggttatttgattttctggagtccaccctcttgagt
tctttatatatattggatattagtcccctatctgatttaagataggtaaa
ggtcctttcccaatctgttggtggtctttttgtcttattgacggtgtctt
ttgccttgcagaagctttgcaatttcatgaggtcccatttgtcaatcctc
gatcttaaagcacaagccattgctgttctattcaggaattttttccctgt
gcccatatcttcaagacttttccccactttctcctctataagtttcagtg
tctctggttttatgtggagttccttgatccacttagatttgaccttagta
caaggagagaggaatgggtcgattgcattcttctacatgataacaaccag
ttgtgccagcaccatttgttgaaaatgctgtctttcttccactggatggt
tttagcctcccttgtcgaagatcaagtgaccataggtgtgtggggtcatt
tctggctctcaattctattccattggtctactgtctgtcaggataccagt
accatgcaggtgtaatccacaattgctcctgtagttaaagccttaaggtc
aggcattggtgattccacagaaggtacttatctgagagaaagaacttttg
caatcctaggtttgtatatcgaatggaattgccagaatgcctcttctcgg
atactcgttggaagaaaatagtaa
gaattcattatgtgtatgaggtaacacaggagacagaggtgataaggcca
cattgaaccacacacttgtgaaaggtgatcagaacacagtgatttcaaca
tctgcaacttcttaccccagtaggcccggacagctgatagctctgaaatg
ataaaacatttggagacttttattagaagcaaagattcgaaagaggtaat
actttgctctctctagaggtaagaaagggtggtataagaagaggtttatg
agaggcttaaaaaagtttaaaggtcctctctggtaaacaagaacacttta
gggtgctccctcggacacagctgtatcgtcctcctcacagaacacccctc
cctgacttccctgctatctttaccatagaaactgcctgctgctctcctca
cctctgaacttttgtagcatgccactcagatcaggagcttggaataccat
gctcagtttcttagaaactgcttttggcttcttcagtgtccagatctgac
tcctagggatggagaaatagtttaatctttacatctgtcatgttgttgtc
ttgctaacacaatggcctttctctccttccacatcactgatgtgcttcat
acctgaggatcctaaaggaaagccctgactgtgaatcagaagccacaggc
ctctgtgaaatgttccctgtgacactgggaggatctaaccctcttgaagt
cacagctgcctcttcttaatatggggtagctttcatctcttgaaatctca
tggtaataatataaatttgggtgaaaagcatcggaatgacattggcacag
cactgagggtgcggtgaggacctatgagttctcaaggaaattgagagcaa
ggctgtaggtcctggctgtgatgtaggactcataaactaactgcctgtga
gtttgtgagtagtccgaagcctgggttccacacacacaccacaccccatg
ccccataatagattaacaagatggttcttctggggaagagaaagcctgac
ttctaggtatgatccacatcagagaataacattgtttatgggggaaaggc
cttgcaaaagaaaagttattgctaaattgatgtggtcaggcagactagaa
ggctctgtctttaaaattatcagacagctacgacttcatcttta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_111483159_111484303
seq2: B6Ng01-349M14.g_68_1211 (reverse)

seq1  TAAAGATGAGTTCGTAGCTGTCCTGATTAATTTTAAAGACAGGAGCCTCT  50
      |||||||||  |||||||||| |||| |||||||||||||| ||||||  
seq2  TAAAGATGAAGTCGTAGCTGT-CTGA-TAATTTTAAAGACA-GAGCCTTC  47

seq1  AAGTCTGCCTGACCACATTCATTTTAAGCAATAACTTTTCTTTTGCAAGG  100
       |||||||||||||||||  ||||  ||||||||||||||||||||||||
seq2  TAGTCTGCCTGACCACATCAATTT--AGCAATAACTTTTCTTTTGCAAGG  95

seq1  -CTTTCCCCCAT-AACAATGTTA-TCTCTGATGTGGATCATACCTAGAGT  147
       ||||||||||| |||||||||| ||||||||||||||||||||||||  
seq2  CCTTTCCCCCATAAACAATGTTATTCTCTGATGTGGATCATACCTAGAAG  145

seq1  TCAGGCTTTCTTCTTCCCCCAGAAGAACCATC-TGTT-ATCTA-TATGGG  194
      |||||||||| |||| |||||||||||||||| |||| ||||| ||||||
seq2  TCAGGCTTTC-TCTT-CCCCAGAAGAACCATCTTGTTAATCTATTATGGG  193

seq1  GCATGGGGTGTGGTGTGTGTGTGGAACCCAGGCTTCGGACTACTCACAAA  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGGGTGTGGTGTGTGTGTGGAACCCAGGCTTCGGACTACTCACAAA  243

seq1  CTCACAGGCAGTTAGTTTATGAGTCCTACATCACAGCCAGGACCTACAGC  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACAGGCAGTTAGTTTATGAGTCCTACATCACAGCCAGGACCTACAGC  293

seq1  CTTGCTCTCAATTTCCTTGAGAACTCATAGGTCCTCACCGCACCCTCAGT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTCTCAATTTCCTTGAGAACTCATAGGTCCTCACCGCACCCTCAGT  343

seq1  GCTGTGCCAATGTCATTCCGATGCTTTTCACCCAAATTTATATTATTACC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGCCAATGTCATTCCGATGCTTTTCACCCAAATTTATATTATTACC  393

seq1  ATGAGATTTCAAGAGATGAAAGCTACCCCATATTAAGAAGAGGCAGCTGT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGATTTCAAGAGATGAAAGCTACCCCATATTAAGAAGAGGCAGCTGT  443

seq1  GACTTCAAGAGGGTTAGATCCTCCCAGTGTCACAGGGAACATTTCACAGA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCAAGAGGGTTAGATCCTCCCAGTGTCACAGGGAACATTTCACAGA  493

seq1  GGCCTGTGGCTTCTGATTCACAGTCAGGGCTTTCCTTTAGGATCCTCAGG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGTGGCTTCTGATTCACAGTCAGGGCTTTCCTTTAGGATCCTCAGG  543

seq1  TATGAAGCACATCAGTGATGTGGAAGGAGAGAAAGGCCATTGTGTTAGCA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAGCACATCAGTGATGTGGAAGGAGAGAAAGGCCATTGTGTTAGCA  593

seq1  AGACAACAACATGACAGATGTAAAGATTAAACTATTTCTCCATCCCTAGG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAACAACATGACAGATGTAAAGATTAAACTATTTCTCCATCCCTAGG  643

seq1  AGTCAGATCTGGACACTGAAGAAGCCAAAAGCAGTTTCTAAGAAACTGAG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGATCTGGACACTGAAGAAGCCAAAAGCAGTTTCTAAGAAACTGAG  693

seq1  CATGGTATTCCAAGCTCCTGATCTGAGTGGCATGCTACAAAAGTTCAGAG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTATTCCAAGCTCCTGATCTGAGTGGCATGCTACAAAAGTTCAGAG  743

seq1  GTGAGGAGAGCAGCAGGCAGTTTCTATGGTAAAGATAGCAGGGAAGTCAG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGAGAGCAGCAGGCAGTTTCTATGGTAAAGATAGCAGGGAAGTCAG  793

seq1  GGAGGGGTGTTCTGTGAGGAGGACGATACAGCTGTGTCCGAGGGAGCACC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGGTGTTCTGTGAGGAGGACGATACAGCTGTGTCCGAGGGAGCACC  843

seq1  CTAAAGTGTTCTTGTTTACCAGAGAGGACCTTTAAACTTTTTTAAGCCTC  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGTGTTCTTGTTTACCAGAGAGGACCTTTAAACTTTTTTAAGCCTC  893

seq1  TCATAAACCTCTTCTTATACCACCCTTTCTTACCTCTAGAGAGAGCAAAG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAACCTCTTCTTATACCACCCTTTCTTACCTCTAGAGAGAGCAAAG  943

seq1  TATTACCTCTTTCGAATCTTTGCTTCTAATAAAAGTCTCCAAATGTTTTA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACCTCTTTCGAATCTTTGCTTCTAATAAAAGTCTCCAAATGTTTTA  993

seq1  TCATTTCAGAGCTATCAGCTGTCCGGGCCTACTGGGGTAAGAAGTTGCAG  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTCAGAGCTATCAGCTGTCCGGGCCTACTGGGGTAAGAAGTTGCAG  1043

seq1  ATGTTGAAATCACTGTGTTCTGATCACCTTTCACAAGTGTGTGGTTCAAT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGAAATCACTGTGTTCTGATCACCTTTCACAAGTGTGTGGTTCAAT  1093

seq1  GTGGCCTTATCACCTCTGTCTCCTGTGTTACCTCATACACATAATGAATT  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCCTTATCACCTCTGTCTCCTGTGTTACCTCATACACATAATGAATT  1143

seq1  C  1145
      |
seq2  C  1144