BAC Information

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BAC

Clone NameB6Ng01-350E03
Chromosome7 (Build37)
Map Location 145,570,717 - 145,571,796
singlet/doubletsinglet
Overlap geneTcerg1l
Upstream gene9430038I01Rik, Txnl2, LOC435235
Downstream geneLOC100043290, Mapk1ip1, Ppp2r2d, Bnip3, EG668784, LOC669185, 6330417G02Rik, Dpysl4, Stk32c, LOC100038956, Lrrc27, Pwwp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-350E03.bB6Ng01-350E03.g
ACCGA130986GA130987
length9831,070
definitionB6Ng01-350E03.b B6Ng01-350E03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagaacttttcagctggggaacgaggtaagtctgatcttgaactt
tctaacgaaattcaagacagtctatcagaagtaaagtggaatatgtttgg
ccttgaattttttctggtgttaggagcccttttgttccttttcacatgtt
atcaagtggttaagatagggctgaaaattctagaggaaattcaggacaag
ctatcagaagtaaagcggggagagagagtaggaacaaaaaggaaatatgg
tacacaaaataagtatacaggcctttccaagggtcttgaacccgaggaaa
agtttaggtcaggtaagaatacctggagagagattagaagaaaaagagga
aaaagggaaaagaagaaagatcaattagcggaggtctctaggaaaaggag
cctgtgctcatcgctggatgggctcggggagccagctcttagtagctctg
aagcaggtgaagaattctcctctgaggaaacagactgggagaaaaaagcg
gctcattatgaaagaaaaggataccagccgccaagtaaagtgctaactag
tcatttaaggaaaaagccaaaagcggctggcgaaggccagtttgctaatt
ggcctcagggcaatcggctaccaggtgcactcccgccctatgcggagtcc
ccgccctgcgtagtgcgtcagcccgtagtgcgtcagcaatgcgcagagag
gcagtgcgcagagaggcagtgcgcagactcattcattccccgagaggaac
aaaggaaaatacaacaggcatttccagtctttgaaggagccgagggtggg
cgtgtccacgctccggtagaatatgtgcagattaaagaaattgctgagtc
ggttcgtaaatacggaaccaatgctaattttaccttggtgcagttagaca
ggcttgcccggcatggcactaactcctgccgactggcaaatgattgcaaa
agccgctctccctaattatgggccaatatttgg
gaattctccttgatctctgctgcagttactgcctccaggttcttacctga
gctcctgactttgcatctgtcaatggtggactgggacctgaaagccaact
aaactttcccccctcccccagtttgtttttggtcagagtggttatcacag
catcagagaggctggctggaacaagtggttgttttgcctgcattatgtaa
atgttaaacgcatgctttcctctgatgagaccaagcacctcctggggagt
cttgtgggctgtcctggagttactgacatttctttgtctagtgtgtttga
tctatgttgtgcgtgaaagcgcactgtgtcttgtgatcttctattatgtt
tggcgtgaaagctcactgagaaactgcaacactccacttgaattctttgg
aagctttatattacaatatcagaatacaatatttgttaaaatgtagggct
cgcctgttaaaatagaactcagtccttcctttgtagtaagattttttagc
tattgatctaatgcgtttctttccggttgactactccatcttgttcctca
ctctggtagggctgacaaatgaatagggggtgcccttgggaatccatcct
tgcactgagctctggaggacatcttcctgtggtcatcttccatggttcta
tagagagtaactttcctaacccctgttgaccgttgtcacactttgcatgt
gaagtattatttgcatgtgttggcaccttgctactctagaaattactcag
acaacactattagcagttgcttagctcactggttcctccagaaagcaaca
gtcagattctaagatatttccccacacattttacagccttgtggacatgt
gtgcttttctgttttgttgcttgtgtttggggctggggtatgggtggtta
atccgtgtttgcttgtttctcttgtttatatattcctgagttgtaagaca
tatttgcaccttagctccacacattgttaacattacttcgagaatatttt
ttttaaaaaagactatttacttttaaatgtgttctcgtgtggcaaactaa
aggtgctattttgtcattac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_145570717_145571796
seq2: B6Ng01-350E03.g_67_1136 (reverse)

seq1  GTAATGACAAAAATAGCACCTTTTAAGTTTTCCCACACAGAGAAACACAA  50
      |||||||| ||||||||||||||  || ||| |||||| ||| ||||| |
seq2  GTAATGAC-AAAATAGCACCTTT--AG-TTTGCCACAC-GAG-AACAC-A  43

seq1  TTTAAAAGTAAAATAAGTCTTTTTT-AAAAAAATATTCTCGAAAGTAATG  99
      ||||||||||||   |||||||||| ||||||||||||||| ||||||||
seq2  TTTAAAAGTAAA--TAGTCTTTTTTAAAAAAAATATTCTCG-AAGTAATG  90

seq1  -TAACAATGTGTGGAGCTAAGGTGCAAATATGTCTTAACAACTCAGGAAA  148
       ||||||||||||||||||||||||||||||||||| |||||||||| ||
seq2  TTAACAATGTGTGGAGCTAAGGTGCAAATATGTCTT-ACAACTCAGG-AA  138

seq1  TATATAAACAAGAGAAACAAGCAAACACGGATTAACCACCCATACCCCAG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAAACAAGAGAAACAAGCAAACACGGATTAACCACCCATACCCCAG  188

seq1  CCCCAAACACAAGCAACAAAACAGAAAAGCACACATGTCCACAAGGCTGT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAAACACAAGCAACAAAACAGAAAAGCACACATGTCCACAAGGCTGT  238

seq1  AAAATGTGTGGGGAAATATCTTAGAATCTGACTGTTGCTTTCTGGAGGAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTGTGGGGAAATATCTTAGAATCTGACTGTTGCTTTCTGGAGGAA  288

seq1  CCAGTGAGCTAAGCAACTGCTAATAGTGTTGTCTGAGTAATTTCTAGAGT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGAGCTAAGCAACTGCTAATAGTGTTGTCTGAGTAATTTCTAGAGT  338

seq1  AGCAAGGTGCCAACACATGCAAATAATACTTCACATGCAAAGTGTGACAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGGTGCCAACACATGCAAATAATACTTCACATGCAAAGTGTGACAA  388

seq1  CGGTCAACAGGGGTTAGGAAAGTTACTCTCTATAGAACCATGGAAGATGA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTCAACAGGGGTTAGGAAAGTTACTCTCTATAGAACCATGGAAGATGA  438

seq1  CCACAGGAAGATGTCCTCCAGAGCTCAGTGCAAGGATGGATTCCCAAGGG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGGAAGATGTCCTCCAGAGCTCAGTGCAAGGATGGATTCCCAAGGG  488

seq1  CACCCCCTATTCATTTGTCAGCCCTACCAGAGTGAGGAACAAGATGGAGT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCCTATTCATTTGTCAGCCCTACCAGAGTGAGGAACAAGATGGAGT  538

seq1  AGTCAACCGGAAAGAAACGCATTAGATCAATAGCTAAAAAATCTTACTAC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAACCGGAAAGAAACGCATTAGATCAATAGCTAAAAAATCTTACTAC  588

seq1  AAAGGAAGGACTGAGTTCTATTTTAACAGGCGAGCCCTACATTTTAACAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAGGACTGAGTTCTATTTTAACAGGCGAGCCCTACATTTTAACAA  638

seq1  ATATTGTATTCTGATATTGTAATATAAAGCTTCCAAAGAATTCAAGTGGA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGTATTCTGATATTGTAATATAAAGCTTCCAAAGAATTCAAGTGGA  688

seq1  GTGTTGCAGTTTCTCAGTGAGCTTTCACGCCAAACATAATAGAAGATCAC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGCAGTTTCTCAGTGAGCTTTCACGCCAAACATAATAGAAGATCAC  738

seq1  AAGACACAGTGCGCTTTCACGCACAACATAGATCAAACACACTAGACAAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACACAGTGCGCTTTCACGCACAACATAGATCAAACACACTAGACAAA  788

seq1  GAAATGTCAGTAACTCCAGGACAGCCCACAAGACTCCCCAGGAGGTGCTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGTCAGTAACTCCAGGACAGCCCACAAGACTCCCCAGGAGGTGCTT  838

seq1  GGTCTCATCAGAGGAAAGCATGCGTTTAACATTTACATAATGCAGGCAAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCATCAGAGGAAAGCATGCGTTTAACATTTACATAATGCAGGCAAA  888

seq1  ACAACCACTTGTTCCAGCCAGCCTCTCTGATGCTGTGATAACCACTCTGA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCACTTGTTCCAGCCAGCCTCTCTGATGCTGTGATAACCACTCTGA  938

seq1  CCAAAAACAAACTGGGGGAGGGGGGAAAGTTTAGTTGGCTTTCAGGTCCC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAAACAAACTGGGGGAGGGGGGAAAGTTTAGTTGGCTTTCAGGTCCC  988

seq1  AGTCCACCATTGACAGATGCAAAGTCAGGAGCTCAGGTAAGAACCTGGAG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCACCATTGACAGATGCAAAGTCAGGAGCTCAGGTAAGAACCTGGAG  1038

seq1  GCAGTAACTGCAGCAGAGATCAAGGAGAATTC  1080
      ||||||||||||||||||||||||||||||||
seq2  GCAGTAACTGCAGCAGAGATCAAGGAGAATTC  1070