BAC Information

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BAC

Clone NameB6Ng01-350E13
Chromosome7 (Build37)
Map Location 59,503,413 - 59,504,580
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668779, Tmem16e, Slc17a6, EG620599, LOC654473, LOC100040608, Gas2, 1700015G11Rik, EG668783
Downstream geneEG620782, LOC100040692, Gm1865
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-350E13.bB6Ng01-350E13.g
ACCGA131004GA131005
length1,1861,140
definitionB6Ng01-350E13.b B6Ng01-350E13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccagaagattaagacagggagatctcagagttcaaggtcatctgg
gattaaagacattgtggcacacacctttaatctgggctacaccttctact
ggaaacttatataaggacgttggacgaaggaagactctctctctctatcc
tttgcctgcttgccatgtggaaatccttggacttccattcacagttgttg
ctgaccattgttgagagttctgcagactgtaagttatcaacaaattcctt
tactatatagatactctagaatccaaaataaattcaagaccactcagccc
cttgcccctctgaagggactttccaaactatactagcaggccaagtgcag
agccagataaggaagctggatgactaaacaatactgagaaaaaaccatca
gggcaggcagagtgagggactaggccaaaggtagtcaccctatgcaaacc
aaccaatgactgaaagggttacttgctacaccaattagaataagccagcc
agccttgttgcctaaatctgccccttacaaggtataaaaagtgtgtttgt
tttttgttccgggtctctctttgcctgtgtgctggggtgggggtggggtc
cccaatgccttggatcaataaaaaaaaaaaatctttccgtttgcaacaat
gtcagtctctgtggtcttttggtgagaccagagaggtttggtggactcca
acaagttgaatcccagacactggacagttggagtctgactttgcttttga
ttgtgactgtgccctgatatttttccttcttgaagaaaagaggtatttta
gtggagtccacagttaatagacttcgaatttttaaaagactttgaattta
aaagatattggatattttaaagggattgaacttttaatatgtaaagactg
tgggacatttaagttattagatcttggggatgaataagcaataaaagagt
tgaggcttaatagtgatgtgtttgtaatgtcaagtggaccaggagtctaa
ttgtacctggcctggttttgtgtgtcacctgacactaggctgagtatcac
cgagaaagagcctaagtggagagcgccctcatgagatccagctgtgggca
ttttcccaataggatcaaggtgaatgtccatgagtgtaccctctggctgt
agctactctcatagcaaggctacgaccctgagtaca

gaattcaagtgcccccaaaataaattacaaaaaaaaaggaaaaatctaag
gtagagtgatggtatttatcctggtgttatagtcccctaatctgctcata
gaagctttaacccagaagatgatctcagcaataaactatctctagcaggt
ttattgaggccaaacagggtcatgctggccaaagataatccatgaataca
atgtccacgaaaacagagaagaaagaaaagaaaggagaagaggataaaga
atagagccttagagggcaaggtttgtcatcttaattttatgaatgcagat
gcatggccacttcagaatgttttataaatatgcttctttcctaatatgct
tcatttattcatttaatgtatttgagattcttaaactttagtaacttcaa
ttactgagaataaatatgtggaatacaaatagttttccatgaaaccaatt
ttaaaaagtattgtgttgtcgttgactttgagtctctgtctccccacctc
catccatttctgttccagtgagaagcactataaaaatgaggaagaaaaga
gaaaaaaaatcactgaagatattttttctaaatgtctgccaacagtgtga
tttcttttccttctgtgtgtgtcatagacaggctgaatgtggcattcaaa
gcaatcagacctttcagcatggatagattttgctctgacttggactttcc
acagaaccaacaggcagtgaaaatatctgtagaaatactggccaattctt
tctcctctactatccatagattggtgctaagttcttagcaatgtatgtcc
tcgaggcaataagagaaattataaaatgctatagtgagaaagtttagatt
tatagacggaaagagaattttcagagcatgtgttcccaaaatgggcacat
ttcacaggcctagacagaacttaatcatttctcaactttctcaagtcttg
actttactagaaatcaattaacactcaaacacatgcacacacacacgcac
acacatgataggggtaaaacagctacatttgtgaaatagtgatataatac
attcaaaggctgagactgggagataaccatatcatgtataacatcatgtg
accgactatagcttggatgactgatctgatcctgatcaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_59503413_59504580
seq2: B6Ng01-350E13.g_67_1206 (reverse)

seq1  ATTGATCAGGTATCAAGAATTCAGTCAACTCCAAAAGCTAATAGTCTGTT  50
      |||||||||| ||| |||  |||||||  |||  ||||| |||||| |  
seq2  ATTGATCAGG-ATC-AGA--TCAGTCA--TCC--AAGCT-ATAGTCGG--  39

seq1  TCACATGATGTTATACATGAATATTGTGTTTTAAATTCTCCCAAGTTCTC  100
      ||||||||||||||||||| |||| |    |||   |||||||   ||||
seq2  TCACATGATGTTATACATG-ATATGG----TTA---TCTCCCA--GTCTC  79

seq1  AGGCTTTGAAATGTATTATTAATCACTATTTCACAAATGTAGCTGTTTTA  150
      || ||||| ||||||||||  |||||||||||||||||||||||||||||
seq2  AGCCTTTG-AATGTATTAT--ATCACTATTTCACAAATGTAGCTGTTTTA  126

seq1  CCCCCTATCATTGGTGTGTGCGTGTGTGTGTGCATGTGTTTGAGTGTTAA  200
       ||||||||||  |||||||||||||||||||||||||||||||||||||
seq2  -CCCCTATCAT--GTGTGTGCGTGTGTGTGTGCATGTGTTTGAGTGTTAA  173

seq1  TTGATTTCTTAGTAAAGTCAAGACTTGAGAAAGTTGAGAAATGATTAAGT  250
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTC-TAGTAAAGTCAAGACTTGAGAAAGTTGAGAAATGATTAAGT  222

seq1  TCTGTCTAGGCCTGTGAAATGTGCCCATTTTGGGAACACATGCTCTGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTAGGCCTGTGAAATGTGCCCATTTTGGGAACACATGCTCTGAAA  272

seq1  ATTCTCTTTCCGTCTATAAATCTAAACTTTCTCACTATAGCATTTTATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCTTTCCGTCTATAAATCTAAACTTTCTCACTATAGCATTTTATAA  322

seq1  TTTCTCTTATTGCCTCGAGGACATACATTGCTAAGAACTTAGCACCAATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTTATTGCCTCGAGGACATACATTGCTAAGAACTTAGCACCAATC  372

seq1  TATGGATAGTAGAGGAGAAAGAATTGGCCAGTATTTCTACAGATATTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGATAGTAGAGGAGAAAGAATTGGCCAGTATTTCTACAGATATTTTC  422

seq1  ACTGCCTGTTGGTTCTGTGGAAAGTCCAAGTCAGAGCAAAATCTATCCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCTGTTGGTTCTGTGGAAAGTCCAAGTCAGAGCAAAATCTATCCAT  472

seq1  GCTGAAAGGTCTGATTGCTTTGAATGCCACATTCAGCCTGTCTATGACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAAAGGTCTGATTGCTTTGAATGCCACATTCAGCCTGTCTATGACAC  522

seq1  ACACAGAAGGAAAAGAAATCACACTGTTGGCAGACATTTAGAAAAAATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGAAGGAAAAGAAATCACACTGTTGGCAGACATTTAGAAAAAATAT  572

seq1  CTTCAGTGATTTTTTTTCTCTTTTCTTCCTCATTTTTATAGTGCTTCTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGTGATTTTTTTTCTCTTTTCTTCCTCATTTTTATAGTGCTTCTCA  622

seq1  CTGGAACAGAAATGGATGGAGGTGGGGAGACAGAGACTCAAAGTCAACGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAACAGAAATGGATGGAGGTGGGGAGACAGAGACTCAAAGTCAACGA  672

seq1  CAACACAATACTTTTTAAAATTGGTTTCATGGAAAACTATTTGTATTCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACAATACTTTTTAAAATTGGTTTCATGGAAAACTATTTGTATTCCA  722

seq1  CATATTTATTCTCAGTAATTGAAGTTACTAAAGTTTAAGAATCTCAAATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTTATTCTCAGTAATTGAAGTTACTAAAGTTTAAGAATCTCAAATA  772

seq1  CATTAAATGAATAAATGAAGCATATTAGGAAAGAAGCATATTTATAAAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAATGAATAAATGAAGCATATTAGGAAAGAAGCATATTTATAAAAC  822

seq1  ATTCTGAAGTGGCCATGCATCTGCATTCATAAAATTAAGATGACAAACCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGAAGTGGCCATGCATCTGCATTCATAAAATTAAGATGACAAACCT  872

seq1  TGCCCTCTAAGGCTCTATTCTTTATCCTCTTCTCCTTTCTTTTCTTTCTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTCTAAGGCTCTATTCTTTATCCTCTTCTCCTTTCTTTTCTTTCTT  922

seq1  CTCTGTTTTCGTGGACATTGTATTCATGGATTATCTTTGGCCAGCATGAC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTTTTCGTGGACATTGTATTCATGGATTATCTTTGGCCAGCATGAC  972

seq1  CCTGTTTGGCCTCAATAAACCTGCTAGAGATAGTTTATTGCTGAGATCAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTTGGCCTCAATAAACCTGCTAGAGATAGTTTATTGCTGAGATCAT  1022

seq1  CTTCTGGGTTAAAGCTTCTATGAGCAGATTAGGGGACTATAACACCAGGA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGGGTTAAAGCTTCTATGAGCAGATTAGGGGACTATAACACCAGGA  1072

seq1  TAAATACCATCACTCTACCTTAGATTTTTCCTTTTTTTTTGTAATTTATT  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATACCATCACTCTACCTTAGATTTTTCCTTTTTTTTTGTAATTTATT  1122

seq1  TTGGGGGCACTTGAATTC  1168
      ||||||||||||||||||
seq2  TTGGGGGCACTTGAATTC  1140


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