MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-350E20
Chromosome	7 (Build37)
Map Location	122,665,472 - 122,785,315
singlet/doublet	doublet
Overlap gene	Sox6
Upstream gene	Pde3b, Cyp2r1, Calca, LOC100043295, Calcb, Insc, EG627967, LOC668472
Downstream gene	LOC100042779, 1110006G14Rik, EG668479, LOC100043313, 1110004F10Rik, Plekha7, Rps13, Pik3c2a, LOC100042798, Nucb2, LOC100043320, EG668484, LOC668485
Link	Open Mouse BAC browser

Click to get alignment info.

name	Pde3b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18576 MGI:1333863
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cyp2r1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:244209 MGI:2449771
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Calca (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12310 MGI:2151253
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100043295 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043295
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 16 mRNAs, 1926 ESTs, 11 Proteins

name	Calcb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:116903 MGI:2151254
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Insc (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:233752 MGI:1917942
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG627967 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:627967 MGI:3648347
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 48 ESTs, 8 Proteins

name	LOC668472 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668472
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 5 Proteins pseudo : _no_value

name	Sox6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20679 MGI:98368
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100042779 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042779
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins

name	1110006G14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68469 MGI:1915719
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	EG668479 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668479 MGI:3644383
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins

name	LOC100043313 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043313
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 114 ESTs, 5 Proteins

name	1110004F10Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56372 MGI:1929274
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Plekha7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:233765 MGI:2445094
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rps13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68052 MGI:1915302
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pik3c2a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18704 MGI:1203729
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042798 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042798
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 10 ESTs

name	Nucb2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:53322 MGI:1858179
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043320 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043320
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs

name	EG668484 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668484 MGI:3647587
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	LOC668485 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668485
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 14 ESTs, 9 Proteins pseudo : _no_value

name	Pde3b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:112983647 GeneID:18576 MGI:1333863
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphodiesterase 3B, cGMP-inhibited transcript_id : NM_011055.2

name	Cyp2r1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34330187 GeneID:244209 MGI:2449771
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytochrome P450, family 2, subfamily r, polypeptide 1 transcript_id : NM_177382.3

name	Calca (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802759 GeneID:12310 MGI:2151253
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calcitonin/calcitonin-related polypeptide, alpha transcript_id : NM_001033954.2

name	Calca (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33468844 GeneID:12310 MGI:2151253
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calcitonin/calcitonin-related polypeptide, alpha transcript_id : NM_007587.1

name	LOC100043295 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149257748 GeneID:100043295
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 16 mRNAs, 1926 ESTs, 11 Proteins product : similar to ribosomal protein L5 transcript_id : XM_001479452.1

name	Calcb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:16930814 GeneID:116903 MGI:2151254
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calcitonin-related polypeptide, beta transcript_id : NM_054084.1

name	Insc (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31343387 GeneID:233752 MGI:1917942
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : inscuteable homolog (Drosophila) transcript_id : NM_173767.2

name	EG627967 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94380971 GeneID:627967 MGI:3648347
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 48 ESTs, 8 Proteins product : predicted gene, EG627967 transcript_id : XM_892675.2

name	Sox6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70980556 GeneID:20679 MGI:98368
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SRY-box containing gene 6 transcript_id : NM_001025560.1

name	Sox6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144446087 GeneID:20679 MGI:98368
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SRY-box containing gene 6 transcript_id : NM_011445.3

name	LOC100042779 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149257673 GeneID:100042779
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins product : similar to F36H12.3 transcript_id : XM_001478796.1

name	1110006G14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149257675 GeneID:68469 MGI:1915719
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : RIKEN cDNA 1110006G14 gene transcript_id : XM_001478810.1

name	EG668479 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149257677 GeneID:668479 MGI:3644383
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins product : predicted gene, EG668479 transcript_id : XM_001001706.2

name	LOC100043313 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149257755 GeneID:100043313
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 114 ESTs, 5 Proteins product : similar to nucleoporin 35 transcript_id : XM_001479515.1

name	1110004F10Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130596 GeneID:56372 MGI:1929274
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1110004F10 gene transcript_id : NM_019772.2

name	Plekha7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142374469 GeneID:233765 MGI:2445094
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pleckstrin homology domain containing, family A member 7 transcript_id : NM_172743.2

name	Rps13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142375684 GeneID:68052 MGI:1915302
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribosomal protein S13 transcript_id : NM_026533.2

name	Pik3c2a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6755057 GeneID:18704 MGI:1203729
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide transcript_id : NM_011083.1

name	LOC100042798 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149257679 GeneID:100042798
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 10 ESTs product : hypothetical protein LOC100042798 transcript_id : XM_001478836.1

name	Nucb2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7949093 GeneID:53322 MGI:1858179
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nucleobindin 2 transcript_id : NM_016773.1

name	LOC100043320 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149257757 GeneID:100043320
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs product : hypothetical protein LOC100043320 transcript_id : XM_001479542.1

name	EG668484 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149257681 GeneID:668484 MGI:3647587
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : predicted gene, EG668484 transcript_id : XM_001001727.2

name	Pde3b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:112983648 CCDS:CCDS21760.1 GeneID:18576 MGI:1333863
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004114 - 3',5'-cyclic-nucleotide phosphodiesterase activity [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA] GO_process : GO:0031018 - endocrine pancreas development [Evidence IDA]; GO:0042593 - glucose homeostasis [Evidence IDA]; GO:0050796 - regulation of insulin secretion [Evidence IDA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : phosphodiesterase 3B, cGMP-inhibited protein_id : NP_035185.2

name	Cyp2r1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34330188 CCDS:CCDS21761.1 GeneID:244209 MGI:2449771
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005792 - microsome [Evidence IEA] GO_function : GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004497 - monooxygenase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0030343 - vitamin D3 25-hydroxylase activity [Evidence IDA] GO_process : GO:0006118 - electron transport [Evidence IEA]; GO:0042359 - vitamin D metabolism [Evidence IDA] codon_start : 1 note : cytochrome P450, 2r1 product : cytochrome P450, family 2, subfamily r, polypeptide 1 protein_id : NP_796356.2

name	Calca (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:76880463 CCDS:CCDS21762.1 GeneID:12310 MGI:2151253
definition	GO_component : GO:0005576 - extracellular region [Evidence IDA] [Evidence TAS]; GO:0005622 - intracellular [Evidence IDA] GO_function : GO:0001635 - calcitonin gene-related polypeptide receptor activity [Evidence IDA]; GO:0005179 - hormone activity [Evidence IEA]; GO:0005102 - receptor binding [Evidence TAS] [Evidence IDA] GO_process : GO:0007631 - feeding behavior [Evidence IDA]; GO:0006954 - inflammatory response [Evidence IDA]; GO:0045986 - negative regulation of smooth muscle contraction [Evidence IDA]; GO:0007218 - neuropeptide signaling pathway [Evidence IDA] codon_start : 1 note : isoform Cgrp preproprotein is encoded by transcript variant 2; alpha CGRP; calcitonin/alpha CGRP; calcitonin gene-related peptide product : calcitonin isoform Cgrp preproprotein protein_id : NP_001029126.1

name	Calca (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33468845 CCDS:CCDS21763.1 GeneID:12310 MGI:2151253
definition	GO_component : GO:0005576 - extracellular region [Evidence IDA] [Evidence TAS]; GO:0005622 - intracellular [Evidence IDA] GO_function : GO:0001635 - calcitonin gene-related polypeptide receptor activity [Evidence IDA]; GO:0005179 - hormone activity [Evidence IEA]; GO:0005102 - receptor binding [Evidence TAS] [Evidence IDA] GO_process : GO:0007631 - feeding behavior [Evidence IDA]; GO:0006954 - inflammatory response [Evidence IDA]; GO:0045986 - negative regulation of smooth muscle contraction [Evidence IDA]; GO:0007218 - neuropeptide signaling pathway [Evidence IDA] codon_start : 1 exception : mismatches in translation note : isoform Calca preproprotein is encoded by transcript variant 1; alpha CGRP; calcitonin/alpha CGRP; calcitonin gene-related peptide product : calcitonin isoform Calca preproprotein protein_id : NP_031613.1

name	LOC100043295 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149257749 GeneID:100043295
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479502.1

name	Calcb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:16930815 CCDS:CCDS21764.1 GeneID:116903 MGI:2151254
definition	codon_start : 1 exception : mismatches in translation product : calcitonin-related polypeptide, beta protein_id : NP_473425.1

name	Insc (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30424627 GeneID:233752 MGI:1917942
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 product : inscuteable protein_id : NP_776128.1

name	EG627967 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82907488 GeneID:627967 MGI:3648347
definition	codon_start : 1 product : similar to RIKEN cDNA 1110033J19 gene protein_id : XP_897768.1

name	Sox6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70980557 GeneID:20679 MGI:98368
definition	GO_component : GO:0005634 - nucleus [Evidence IC]; GO:0005667 - transcription factor complex [Evidence IC] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003700 - transcription factor activity [Evidence IDA] GO_process : GO:0035051 - cardiac cell differentiation [Evidence IDA]; GO:0051216 - cartilage development [Evidence IGI]; GO:0045165 - cell fate commitment [Evidence IGI]; GO:0042692 - muscle cell differentiation [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 3 is encoded by transcript variant 3 product : SRY (sex determining region Y)-box 6 isoform 3 protein_id : NP_001020731.1

name	Sox6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755610 GeneID:20679 MGI:98368
definition	GO_component : GO:0005634 - nucleus [Evidence IC]; GO:0005667 - transcription factor complex [Evidence IC] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003700 - transcription factor activity [Evidence IDA] GO_process : GO:0035051 - cardiac cell differentiation [Evidence IDA]; GO:0051216 - cartilage development [Evidence IGI]; GO:0045165 - cell fate commitment [Evidence IGI]; GO:0042692 - muscle cell differentiation [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : SRY (sex determining region Y)-box 6 isoform 1 protein_id : NP_035575.1

name	LOC100042779 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149257674 GeneID:100042779
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478846.1

name	1110006G14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149257676 GeneID:68469 MGI:1915719
definition	codon_start : 1 product : hypothetical protein LOC68469 protein_id : XP_001478860.1

name	EG668479 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149257678 GeneID:668479 MGI:3644383
definition	codon_start : 1 product : similar to ribosomal protein S17 protein_id : XP_001001706.2

name	LOC100043313 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149257756 GeneID:100043313
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479565.1

name	1110004F10Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9790217 CCDS:CCDS21766.1 GeneID:56372 MGI:1929274
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : small acidic protein sid2057p product : small acidic protein protein_id : NP_062746.1

name	Plekha7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370088 GeneID:233765 MGI:2445094
definition	codon_start : 1 product : pleckstrin homology domain containing, family A member 7 protein_id : NP_766331.1

name	Rps13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13386034 GeneID:68052 MGI:1915302
definition	GO_component : GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0003735 - structural constituent of ribosome [Evidence IEA] codon_start : 1 product : ribosomal protein S13 protein_id : NP_080809.1

name	Pik3c2a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755058 GeneID:18704 MGI:1203729
definition	GO_function : GO:0004428 - inositol or phosphatidylinositol kinase activity [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0016303 - phosphatidylinositol 3-kinase activity [Evidence IDA]; GO:0035005 - phosphatidylinositol-4-phosphate 3-kinase activity [Evidence IEA]; GO:0035091 - phosphoinositide binding [Evidence IEA]; GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy product : phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide protein_id : NP_035213.1

name	LOC100042798 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149257680 GeneID:100042798
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478886.1

name	Nucb2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7949094 GeneID:53322 MGI:1858179
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005783 - endoplasmic reticulum [Evidence IDA]; GO:0005640 - nuclear outer membrane [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005509 - calcium ion binding [Evidence IDA]; GO:0003677 - DNA binding [Evidence IEA] GO_process : GO:0006874 - calcium ion homeostasis [Evidence TAS] codon_start : 1 exception : mismatches in translation function : DNA and calcium-binding protein note : DNA-binding protein NEFA product : nucleobindin 2 protein_id : NP_058053.1

name	LOC100043320 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149257758 GeneID:100043320
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479592.1

name	EG668484 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149257682 GeneID:668484 MGI:3647587
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001001727.2

name	LOC668472 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149257752 GeneID:668472
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 5 Proteins product : similar to Ribosomal protein L19 pseudo : _no_value transcript_id : XR_034221.1

name	LOC668485 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149257759 GeneID:668485
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 14 ESTs, 9 Proteins product : similar to ribosomal protein L26-like 1 pseudo : _no_value transcript_id : XR_034261.1

clone name	MSMg01-378E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-211I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-184C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179C02
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-140C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-192J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-113A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538H14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-294C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-293G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-308G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-213C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-214G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-168F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-191O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-232K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-202G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-170C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-196P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235P12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309K04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064G07
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-350E20.b	B6Ng01-350E20.g
ACC	GA131018	GA131019
length	1,083	438
definition	B6Ng01-350E20.b	B6Ng01-350E20.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(122,784,224 - 122,785,315)	(122,665,472 - 122,665,915)
sequence	gaattccataggcactgaccttatcaaggtgaagtctgtccattgtggac atggatttgtagataaattggctattaatgttaatttgataaagttagta gtctgaacgaaagagtctatagttagtgcaatagaaataattgtagcgat ctgttttgatggacccttaggtgcattaaaatgcagcatccagggcatcc ctaagatgtgagatagctcttagtgtcttagaggttaccatgaaaggtgg aacaattggaattcccaagaaaatacaccaaaaattattccaccgtaagt agattttacactgttttataatcaactctaagtaaatccatagttgtaaa tgaattaagataaaaagaaaagataatatggactctgggaatcaaaccca ggtgccccggaagagcagcaagcactcagctgctgagtatgtctctagtc atattttcctgcctttaagagacaaagagagttttcatcatgagactata tctggaaagtatatgtagaaagtgtcctcctctgttggattatgcctttt cagagaccctgttcgacacgtggcttagctgtttttcagtgaaaaataaa tggcacttaaagttttctaagactgagatcacatgttctgtcatttgtaa tctttgcatcatgtttctttccaatcatggccctacttgttaaatttttc ttttatgaaagataaaatcaagatataaaaggtctgagattcttttggct gggaggaacctggatggagagcagcctggtttactcattttcaatgctcc tgacctcatacgggtttgtgcttgtgtatgacagaagctgaggttctgtt aaatgacactcccttcccagaatggaccactctgtgccttttctgcttgg gttttttgtgtttgattcctttcttttcctttcaggtcctcttctcttct atctccacatcccatattttcctgctagtctagtctttctgctgcattct atgtcactttctctgattctcagtctttcatcattttatctctgtctatc tcacacttattttcttcactcatttttatgaaa	acacatatactctctcatctagtcctttatctgagagtttattactctac ccccacctcagtctctgtctttctggaaaagcactcacacatacaacctt ttatttaatcactataatcccatggcaccagcatttgcttacccatttta tggattgggaggtgatacagtaatcatattttagagttatgaaatttatc tcaccacagtttaatggttaaaaatataaagatattcttatgcctcacca ctgttttctaaggacagccatagttgtaactgagttcgatgaggctctta cagtcagcattactacattatgacaaggtatactaagaaggaatttggac acaagtgtatacagactgaagaaagaccgtgtgagaacaagaagggcaga tgtagaagccaaggacagaggccttggggcgggggggg
quality values	Open. Hide. 58 36 32 34 62 62 39 18 62 62 62 62 47 50 49 62 62 47 62 62 62 62 62 62 44 47 54 62 62 59 62 44 62 43 49 62 62 59 62 62 59 59 62 62 62 54 54 62 59 59 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 52 58 54 58 58 58 58 58 54 58 46 58 58 54 58 39 38 47 58 58 58 54 42 53 58 46 54 44 52 52 54 58 58 58 54 54 58 52 52 58 54 58 58 58 54 58 58 58 47 58 58 58 53 58 58 58 58 49 39 54 54 58 58 58 58 58 51 50 58 58 54 58 58 49 40 49 51 58 58 52 58 58 54 53 58 58 58 54 51 49 58 48 58 37 58 58 58 34 41 41 51 51 58 53 58 58 53 58 58 54 58 50 49 39 51 58 58 58 53 51 54 49 58 52 58 54 58 53 42 52 52 50 51 58 52 58 51 52 49 58 50 37 42 21 58 51 53 45 54 54 51 31 33 49 54 40 42 51 52 53 39 47 39 54 44 50 54 54 49 51 45 42 54 54 39 53 49 38 41 54 54 42 46 31 52 54 54 37 39 43 45 54 44 51 40 40 41 54 36 36 26 40 51 24 53 52 45 54 18 34 27 47 41 34 54 54 47 51 40 31 47 32 49 40 30 17 52 45 36 11 32 40 40 31 31 31 53 53 39 32 37 29 45 40 31 53 38 25 31 31 31 51 30 30 28 42 30 31 34 51 47 45 32 30 31 30 51 36 42 31 32 30 31 37 17 38 39 39 33 37 31 31 23 47 51 42 47 46 46 32 31 38 32 33 43 30 46 31 36 32 31 43 25 30 31 43 46 23 30 32 31 35 9 42 31 32 32 27 41 28 33 20 46 32 31 32 38 28 18 27 39 31 39 28 31 32 31 37 24 27 24 33 34 32 31 31 30 23 36 31 31 31 37 34 38 27 32 25 25 30 47 48 38 31 25 29 27 24 30 29 47 31 31 48 48 44 44 30 20 16 31 25 48 30 18 31 21 31 11 30 30 47 31 32 26 44 43 31 14 30 31 47 17 22 11 26 21 23 27 20 21 21 21 28 25 22 32 20 33 32 32 32 27 18 30 18 7 11 30 23 32 19 43 23 23 31 32 30 48 48 26 10 17 16 33 26 31 32 24 21 31 32 28 15 26 23 23 34 15 16 18 28 28 12 16 4 16 22 23 28 18 28 24 22 12 20 21 26 29 38 27 21 16 19 21 27 27 18 9 8 14 5 16 16 13 23 18 32 6 5 5 3 8 9 20 47 34 17 6 8 4 4 5 5 5 3 5 5 2 7 22 7 11 21 5 10 8 15 12 15 13 29 28 19 18 10 19 7 3 4 10 20 8 15 29 29 27 9 20 21 6 17 29 17	Open. Hide. 59 51 49 56 36 34 32 56 50 43 56 62 62 62 62 59 59 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 54 62 59 62 62 62 62 54 42 49 62 62 54 54 42 54 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 49 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 54 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 54 49 42 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 47 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 54 52 46 38 52 54 58 58 38 58 58 58 58 46 54 52 34 46 52 58 58 58 49 58 58 58 58 41 41 49 47 13

Alignment Information

BAC End 1

BAC End 2

seq1: chr7_122784224_122785315
seq2: B6Ng01-350E20.b_46_1128 (reverse)

seq1  TTTCAT-AAAATGAGTGAAGAAAATAAGTGTTGAGGATAAGAACAAGAAG  49
      |||||| ||||||||||||||||||||||| ||| ||||   |||   ||
seq2  TTTCATAAAAATGAGTGAAGAAAATAAGTG-TGA-GATA--GACA--GAG  44

seq1  ATAAAAATGAAGGAAAGACTGAAGAATCAGAGAAAGTGACATAGAATGCC  99
      || |||||| | ||||||||| |||||||||||||||||||||||||| |
seq2  AT-AAAATG-ATGAAAGACTG-AGAATCAGAGAAAGTGACATAGAATG-C  90

seq1  AGCAGAAAGACTAGACTAGCAGGAAAATATGGGATGTGGAGATAGAAGAG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAAAGACTAGACTAGCAGGAAAATATGGGATGTGGAGATAGAAGAG  140

seq1  AAGAGGACCTGAAAGGAAAAGAAAGGAATCAAACACAAAAAACCCAAGCA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGACCTGAAAGGAAAAGAAAGGAATCAAACACAAAAAACCCAAGCA  190

seq1  GAAAAGGCACAGAGTGGTCCATTCTGGGAAGGGAGTGTCATTTAACAGAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGGCACAGAGTGGTCCATTCTGGGAAGGGAGTGTCATTTAACAGAA  240

seq1  CCTCAGCTTCTGTCATACACAAGCACAAACCCGTATGAGGTCAGGAGCAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGCTTCTGTCATACACAAGCACAAACCCGTATGAGGTCAGGAGCAT  290

seq1  TGAAAATGAGTAAACCAGGCTGCTCTCCATCCAGGTTCCTCCCAGCCAAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATGAGTAAACCAGGCTGCTCTCCATCCAGGTTCCTCCCAGCCAAA  340

seq1  AGAATCTCAGACCTTTTATATCTTGATTTTATCTTTCATAAAAGAAAAAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCTCAGACCTTTTATATCTTGATTTTATCTTTCATAAAAGAAAAAT  390

seq1  TTAACAAGTAGGGCCATGATTGGAAAGAAACATGATGCAAAGATTACAAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAAGTAGGGCCATGATTGGAAAGAAACATGATGCAAAGATTACAAA  440

seq1  TGACAGAACATGTGATCTCAGTCTTAGAAAACTTTAAGTGCCATTTATTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGAACATGTGATCTCAGTCTTAGAAAACTTTAAGTGCCATTTATTT  490

seq1  TTCACTGAAAAACAGCTAAGCCACGTGTCGAACAGGGTCTCTGAAAAGGC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTGAAAAACAGCTAAGCCACGTGTCGAACAGGGTCTCTGAAAAGGC  540

seq1  ATAATCCAACAGAGGAGGACACTTTCTACATATACTTTCCAGATATAGTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCCAACAGAGGAGGACACTTTCTACATATACTTTCCAGATATAGTC  590

seq1  TCATGATGAAAACTCTCTTTGTCTCTTAAAGGCAGGAAAATATGACTAGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGATGAAAACTCTCTTTGTCTCTTAAAGGCAGGAAAATATGACTAGA  640

seq1  GACATACTCAGCAGCTGAGTGCTTGCTGCTCTTCCGGGGCACCTGGGTTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATACTCAGCAGCTGAGTGCTTGCTGCTCTTCCGGGGCACCTGGGTTT  690

seq1  GATTCCCAGAGTCCATATTATCTTTTCTTTTTATCTTAATTCATTTACAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCCCAGAGTCCATATTATCTTTTCTTTTTATCTTAATTCATTTACAA  740

seq1  CTATGGATTTACTTAGAGTTGATTATAAAACAGTGTAAAATCTACTTACG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGATTTACTTAGAGTTGATTATAAAACAGTGTAAAATCTACTTACG  790

seq1  GTGGAATAATTTTTGGTGTATTTTCTTGGGAATTCCAATTGTTCCACCTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAATAATTTTTGGTGTATTTTCTTGGGAATTCCAATTGTTCCACCTT  840

seq1  TCATGGTAACCTCTAAGACACTAAGAGCTATCTCACATCTTAGGGATGCC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGTAACCTCTAAGACACTAAGAGCTATCTCACATCTTAGGGATGCC  890

seq1  CTGGATGCTGCATTTTAATGCACCTAAGGGTCCATCAAAACAGATCGCTA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATGCTGCATTTTAATGCACCTAAGGGTCCATCAAAACAGATCGCTA  940

seq1  CAATTATTTCTATTGCACTAACTATAGACTCTTTCGTTCAGACTACTAAC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTATTTCTATTGCACTAACTATAGACTCTTTCGTTCAGACTACTAAC  990

seq1  TTTATCAAATTAACATTAATAGCCAATTTATCTACAAATCCATGTCCACA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCAAATTAACATTAATAGCCAATTTATCTACAAATCCATGTCCACA  1040

seq1  ATGGACAGACTTCACCTTGATAAGGTCAGTGCCTATGGAATTC  1092
      |||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACAGACTTCACCTTGATAAGGTCAGTGCCTATGGAATTC  1083

seq1: chr7_122665472_122665915
seq2: B6Ng01-350E20.g_63_506

seq1  GAATTCACACATATACTCTCTCATCTAGTCCTTTATCTGAGAGTTTATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACACATATACTCTCTCATCTAGTCCTTTATCTGAGAGTTTATTA  50

seq1  CTCTACCCCCACCTCAGTCTCTGTCTTTCTGGAAAAGCACTCACACATAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACCCCCACCTCAGTCTCTGTCTTTCTGGAAAAGCACTCACACATAC  100

seq1  AACCTTTTATTTAATCACTATAATCCCATGGCACCAGCATTTGCTTACCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTTTATTTAATCACTATAATCCCATGGCACCAGCATTTGCTTACCC  150

seq1  ATTTTATGGATTGGGAGGTGATACAGTAATCATATTTTAGAGTTATGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATGGATTGGGAGGTGATACAGTAATCATATTTTAGAGTTATGAAA  200

seq1  TTTATCTCACCACAGTTTAATGGTTAAAAATATAAAGATATTCTTATGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCTCACCACAGTTTAATGGTTAAAAATATAAAGATATTCTTATGCC  250

seq1  TCACCACTGTTTTCTAAGGACAGCCATAGTTGTAACTGAGTTCGATGAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCACTGTTTTCTAAGGACAGCCATAGTTGTAACTGAGTTCGATGAGG  300

seq1  CTCTTACAGTCAGCATTACTACATTATGACAAGGTATACTAAGAAGGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTACAGTCAGCATTACTACATTATGACAAGGTATACTAAGAAGGAAT  350

seq1  TTGGACACAAGTGTATACAGACTGAAGAAAGACCGTGTGAGAACAAGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGACACAAGTGTATACAGACTGAAGAAAGACCGTGTGAGAACAAGAAG  400

seq1  GGCAGATGTAGAAGCCAAGGACAGAGGCCTTGGGGCGGGGGGGG  444
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGATGTAGAAGCCAAGGACAGAGGCCTTGGGGCGGGGGGGG  444

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information