Query= MSMg01no046_i12.b1 MSMg01no046_i12.b1 CHROMAT_FILE:
MSMg01no046_i12.b1 PHD_FILE: MSMg01no046_i12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:06:42 2005
(459 letters)
>mm_chr7_132245659_132246517
Length = 859
Score = 864 bits (447), Expect = 0.0
Identities = 456/459 (99%)
Strand = Plus / Minus
Query: 1 attagacaggaatatcacttatcacaagataggatcctgttctctctaccagtcctctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 846 attagacaggaatatcacttatcacaagataggatcctgttctctctaccagtcctctct 787
Query: 61 ccttttctttgtctctctggattctcctttgccctctttccatttttgtgcctctagggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 ccttttctttgtctctctggattctcctttgccctctttccatttttgtgcctctagggg 727
Query: 121 acagaatccagggccctgtacatgcatatatgcaaggcaagtgctctaccactgagttac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 acagaatccagggccctgtacatgcatatatgcaaggcaagtgctctaccactgagttac 667
Query: 181 atcttcatgctctagactttctctttaatcagttttgtctaggaacagctgttagcgcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 atcttcatgctctagactttctctttaatcagttttgtctaggaacagctgttagcgcaa 607
Query: 241 cactaatcccacatatgctgaaattatactagatgtagcatgatagagatgaagaaagat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 cactaatcccacatatgctgaaattatactagatgtagcatgatagagatgaagaaagat 547
Query: 301 cttggcagggactaaacctgccagttcaaacctgctgtcatctgtggattatgacagtct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 cttggcagggactaaacctgccagttcaaacctgctgtcatctgtggattatgacagtct 487
Query: 361 gctaacacggtctgtgcttcacggagcttctgtgctggccttctgagcatagagagctaa 420
||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 486 gctaacacggtctgtgcatcacggagcttctgtgctggccttctgagcaaagagagctaa 427
Query: 421 gcgctgtgcgtagaagcttcagggctctaagagagttca 459
||||||||| |||||||||||||||||||||||||||||
Sbjct: 426 gcgctgtgcttagaagcttcagggctctaagagagttca 388
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 859
Length adjustment: 10
Effective length of query: 449
Effective length of database: 849
Effective search space: 381201
Effective search space used: 381201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no046_i12.g1 MSMg01no046_i12.g1 CHROMAT_FILE:
MSMg01no046_i12.g1 PHD_FILE: MSMg01no046_i12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:06:42 2005
(522 letters)
>mm_chr7_132099496_132100417
Length = 922
Score = 855 bits (442), Expect = 0.0
Identities = 493/522 (94%), Gaps = 19/522 (3%)
Strand = Plus / Plus
Query: 1 ttcagcttaccttcaattgcctaaatcctgctctgtgaattctgctgttcattgcactgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcagcttaccttcaattgcctaaatcctgctctgtgaattctgctgttcattgcactgt 260
Query: 61 tgcccacaaggagagggaccagaagaccagtgagcaccctgccagccgccaccgcagcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgcccacaaggagagggaccagaagaccagtgagcaccctgccagccgccaccgcagcag 320
Query: 121 gggcagggccactactctaactccaagtctgaggtttcagctgccacataacctgacttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggcagggccactactctaactccaagtctgaggtttcagctgccacataacctgacttc 380
Query: 181 tcaagccatcacaggaactgtgctcagtggagtgtggcaatctgaggctcgtgaggacgc 240
||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 381 tcaagccatcacaggaactgtgctcagtggagtgtggcagtctgaggcttgtgaggacgc 440
Query: 241 ctcacacaagaatgttcctgtcactcatactccagtggagtgagggcctgcccactcatc 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctcacacaagagtgttcctgtcactcatactccagtggagtgagggcctgcccactcatc 500
Query: 301 aaaatgggatgaattccaggaacggccatgaaaagcaggcccgttcccagcctccaccct 360
|||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 501 aaaatgggatgaattccaggaacggccatgaaaaacaggcccattcccagcctccaccct 560
Query: 361 ccatcagcacaccccgttttcagggggcaaggaccagcatccaccttcactgatcactgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccatcagcacaccccgttttcagggggcaaggaccagcatccaccttcactgatcactgc 620
Query: 421 cgagttgcttcagtagttcgggatctcattttagattctgagaacttcccctctgcagaa 480
||||||||||| |||||| |||||||||||||||||| |||| |||||||||||||
Sbjct: 621 tgagttgcttcaatagttctggatctcattttagattcagagagcttcccctctgca--- 677
Query: 481 gctgcaatgcaaagcaagggcagtctctgtgggcaagcagtg 522
||||||||||||||||||||||||||
Sbjct: 678 ----------------agggcagtctctgtgggcaagcagtg 703
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 522
Length of database: 922
Length adjustment: 10
Effective length of query: 512
Effective length of database: 912
Effective search space: 466944
Effective search space used: 466944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
