Query= MSMg01no047_c02.b1 MSMg01no047_c02.b1 CHROMAT_FILE:
MSMg01no047_c02.b1 PHD_FILE: MSMg01no047_c02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:07:25 2005
(393 letters)
>mm_chr7_148309297_148310091
Length = 795
Score = 675 bits (349), Expect = 0.0
Identities = 374/383 (97%), Gaps = 2/383 (0%)
Strand = Plus / Minus
Query: 13 gacttccagctggggaggggctcctttctacttatattctcctgtctttctagcctgcct 72
||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 795 gactttcagctggggaggggctcctttctacttacattctcctgtctttctagcctgcct 736
Query: 73 caatgtttgcaacttttacagtttgttgtttttttgttttcttttgttttgagacagggt 132
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 735 caatgtttgcaacttttacagtttgttgtttttttgttttcttttgtttcgagacagggt 676
Query: 133 ttctctgtgtagccctggctgtcttggaactcactctgtagaccaggctggcctcgatct 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 ttctctgtgtagccctggctgtcttggaactcactctgtagaccaggctggcctcgatct 616
Query: 193 cagaaatccacctgcctttgttacagtttgttaaaatactcaacacctgaatactgaacc 252
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 615 cagaaatccacctgcctttgttacagtttgttaaaatactcaacaccttaatactgaacc 556
Query: 253 ttgctctacgaacaaat--gtgtgagtcttctggtaagctgagtgcttgcctctctgtac 310
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 ttgctctacgaacaaatatgtgtgagtcttctggtaagctgagtgcttgcctctctgtac 496
Query: 311 ctcctgccatccattgctctagtccggtgtggctctactcgttgtgttggccctgactta 370
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 ctcctgccacccattgctctagtccggtgtggctctactcgttgtgttggccctgactta 436
Query: 371 tctgcgtgcgtgtgtgtgtgtgt 393
|||| ||| ||||||||||||||
Sbjct: 435 tctgtgtgtgtgtgtgtgtgtgt 413
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 393
Length of database: 795
Length adjustment: 9
Effective length of query: 384
Effective length of database: 786
Effective search space: 301824
Effective search space used: 301824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no047_c02.g1 MSMg01no047_c02.g1 CHROMAT_FILE:
MSMg01no047_c02.g1 PHD_FILE: MSMg01no047_c02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:07:25 2005
(572 letters)
>mm_chr7_148232667_148233638
Length = 972
Score = 1067 bits (552), Expect = 0.0
Identities = 567/572 (99%)
Strand = Plus / Plus
Query: 1 aatgtgtctattgccacaccctctttgtgctgtcatgacgatcataccaagggcctggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatgtgtctattgccacaccctctttgtgctgtcatgacgatcataccaagggcctggtg 260
Query: 61 catggtaggcaagccattgcgacaaagaaccacaagtctgtgaaagcaaaagacatagac 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catggtaggcaagccattgagacaaagaaccacaagtctgtgaaagcaaaagacatagac 320
Query: 121 tctcgattgtgaatagtggtggtaagctctaaggctggcaccaagagatagggggtgact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctcgattgtgaatagtggtggtaagctctaaggctggcaccaagagatagggggtgact 380
Query: 181 tgttagtggaagataaaggctgctgcaaagagtgtgctaacgctaactagctttagttag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgttagtggaagataaaggctgctgcaaagagtgtgctaacgctaactagctttagttag 440
Query: 241 ttttgtggccacaacagttttctgcttcagtgtgcgaaggatatggttcccaagagacac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttttgtggccacaacagttttctgcttcagtgtgcgaaggatatggttcccaagagacac 500
Query: 301 tgcggtttcctgcctgcaaggaaaaaggccaaagagtcttttctgaagttacagccctgg 360
|| ||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||
Sbjct: 501 tgtggtttcctgcctgcaaggaaagaggccagagagtcctttctgaagttacagccctgg 560
Query: 361 agaggcctaagtctgaaacaactcccatcccagcccccctgtgggagccaccacatctcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agaggcctaagtctgaaacaactcccatcccagcccccctgtgggagccaccacatctcc 620
Query: 421 aactgcaagggcttccggtctgatatatggaccccacccgactccaagttaacagggagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aactgcaagggcttccggtctgatatatggaccccacccgactccaagttaacagggagt 680
Query: 481 ttgccaggtccttggaaggtgtcagaagacaagaatctttgagtgagagccaaaagatgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttgccaggtccttggaaggtgtcagaagacaagaatctttgagtgagagccaaaagatgt 740
Query: 541 ggctccccccaaccccaagaggagtgagcacc 572
||||||||||||||||||||||||||||||||
Sbjct: 741 ggctccccccaaccccaagaggagtgagcacc 772
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 972
Length adjustment: 10
Effective length of query: 562
Effective length of database: 962
Effective search space: 540644
Effective search space used: 540644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
