Query= MSMg01no048_b23.b1 MSMg01no048_b23.b1 CHROMAT_FILE:
MSMg01no048_b23.b1 PHD_FILE: MSMg01no048_b23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:08:42 2005
(774 letters)
>mm_chr7_62596484_62597659
Length = 1176
Score = 1431 bits (740), Expect = 0.0
Identities = 767/776 (98%), Gaps = 2/776 (0%)
Strand = Plus / Minus
Query: 1 gctgctaacctgcctcagtggatttattctcattttctatctgtagccattttaatcttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 873 gctgctaacctgcctcagtggatttattctcattttctatctgtagccattttaatcttt 814
Query: 61 tctgtgtgttgtcagaaagcagagacatcttttttccccctgtgcaatatttgtagacac 120
||||||| || |||||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 813 tctgtgtattatcagaaagcagagacatctttttttcccctgttcaatatttgtagacac 754
Query: 121 attgtgtagaagcaagctagttagatcagaagaaatttggaagactgaaattcaagctgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 attgtgtagaagcaagctagttagatcagaagaaatttggaagactgaaattcaagctgt 694
Query: 181 gtcaaaacaaa-ccacaaaataaaatagaaggatatagcactttttactcttgcaaggca 239
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 gtcaaaacaaatgcacaaaataaaatagaaggatatagcactttttactcttgcaaggca 634
Query: 240 acgttttccatttattgtctacaggcaaataactgcttcaacctcctcattgttatttgc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 acgttttccatttattgtctacaggcaaataactgcttcaacctcctcattgttatttgc 574
Query: 300 taaacccttccctgacacacatcaagtacatagttagaaattatattatctgtttataga 359
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 573 taaacccttccctgacacacatcaagtacgtagttagaaattatattatctgtttataga 514
Query: 360 agcttccttccaatttgtaaacccatgagctgacattctaaaccagcatcttagccctgt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 agcttccttccaatttgtaaacccatgagctgacattctaaaccagcatcttagccctgt 454
Query: 420 cttggctgatttgta-ttttttttcagtctcttgttttttaacgatataaaacccagact 478
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 cttggctgatttgtatttttttttcagtctcttgttttttaacgatataaaacccagact 394
Query: 479 gagtgtcctaagcaagtctgtctgagtaaccattttaaaaacagcacatgaaactgcact 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 gagtgtcctaagcaagtctgtctgagtaaccattttaaaaacagcacatgaaactgcact 334
Query: 539 tgtctagctttatagaaaattgtgactacttaaataaactagatattttagaacctgtgg 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 tgtctagctttatagaaaattgtgactacttaaataaactagatattttagaacctgtgg 274
Query: 599 gcacatttcaaatgtcatcactgtcatccccttggtaatatcatgcctagtctaattcaa 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 gcacatttcaaatgtcatcactgtcatccccttggtaatatcatgcctagtctaattcaa 214
Query: 659 gatttattagtaattcttcccttagtccttccctcctcctactcactccttcatcccttc 718
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 213 gatttattagtaattcttcccttagcccttccctcctcctactcactccttcatcccttc 154
Query: 719 tcatctcctttccccctttctccccttcccccctcccatctctcttcatttctttc 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 tcatctcctttccccctttctccccttcccccctcccatctctcttcatttctttc 98
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 774
Length of database: 1176
Length adjustment: 10
Effective length of query: 764
Effective length of database: 1166
Effective search space: 890824
Effective search space used: 890824
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no048_b23.g1 MSMg01no048_b23.g1 CHROMAT_FILE:
MSMg01no048_b23.g1 PHD_FILE: MSMg01no048_b23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:08:42 2005
(670 letters)
>mm_chr7_62486397_62487464
Length = 1068
Score = 1245 bits (644), Expect = 0.0
Identities = 663/670 (98%), Gaps = 2/670 (0%)
Strand = Plus / Plus
Query: 1 tttaccagtaagcaaagcacttttttaatgcctctgttctaataactccaagtgaagctg 60
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 tttaccagtaagcaaagcacttttttaatgcctctgttctaataactcaaagtgaagcta 260
Query: 61 gaatagccttactggctttctgataaaggatatagatagacacataggagtgattatttc 120
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 261 gaatagccttactggctttctgataaagaatatagatagacacataggagtgattatttc 320
Query: 121 tgtttggttttttgttttgtttgttttgtttgtttgtatttgacaatatctctctgtgta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtttggttttttgttttgtttgttttgtttgtttgtatttgacaatatctctctgtgta 380
Query: 181 gccctggtcatcctggaactctctgtgtagaccagtttggtctccaacttagggattcac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gccctggtcatcctggaactctctgtgtagaccagtttggtctccaacttagggattcac 440
Query: 241 ctgcctctgcctcctgagtgttgagattaaagatgttcactactataaaaaaaaagaata 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 441 ctgcctctgcctcctgagtgttgagattaaagatgttcactactataaaaaaaaggaata 500
Query: 301 tagatagaatataggatatagatatagaatatctcattaggaatatagaaagaatttaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tagatagaatataggatatagatatagaatatctcattaggaatatagaaagaatttaga 560
Query: 361 attcttttatttctaatctgttcctcttttgcgggtatttctcatatttatcagttatac 420
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 561 attcttttatttctaatctgttcctcttttgcgggtatttctcatatttat--gttatac 618
Query: 421 ttcaatttcttgaactgatgaagttaatatgcccatttcactccatcctctattctttac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 ttcaatttcttgaactgatgaagttaatatgcccatttcactccatcctctattctttac 678
Query: 481 tatagtatgtgttctcttatgttacttttcatgagttgagttcctcatgttgatgtatat 540
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 679 tatagtatgtgttctcttatgttacttttaatgagttgagttcctcatgttgatgtatat 738
Query: 541 aaataaatggaattctttattaccaacatctttggaaaacaaaagaatacatttggattg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 aaataaatggaattctttattaccaacatctttggaaaacaaaagaatacatttggattg 798
Query: 601 tttttccaacttttgaaattgcttggttcattctgttttaaatatcaatatttttaaatc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 tttttccaacttttgaaattgcttggttcattctgttttaaatatcaatatttttaaatc 858
Query: 661 atgcgtttca 670
||||||||||
Sbjct: 859 atgcgtttca 868
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 670
Length of database: 1068
Length adjustment: 10
Effective length of query: 660
Effective length of database: 1058
Effective search space: 698280
Effective search space used: 698280
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
