Query= MSMg01no048_i10.b1 MSMg01no048_i10.b1 CHROMAT_FILE:
MSMg01no048_i10.b1 PHD_FILE: MSMg01no048_i10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:09:34 2005
(489 letters)
>mm_chr7_86095273_86096160
Length = 888
Score = 833 bits (431), Expect = 0.0
Identities = 473/487 (97%), Gaps = 1/487 (0%)
Strand = Plus / Plus
Query: 1 tgcatgcctccctcccagagctcacaggcagcccagccacagaaaggatgatgaactaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgcatgcctccctcccagagctcacaggcagcccagccacagaaaggatgatgaactaaa 260
Query: 61 atatctgggagtctcagatggacaaatataagtggtgatgactgcagtcactcagaggca 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgtctgggagtctcagatggacaaatataagtggtgatgactgcagtcactcagaggca 320
Query: 121 gatggcccttcaaaccagcaagaaagtgaccatgaaactgtagtgtgtagggtgccactc 180
|||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 gatgttccttcaaaccagcaagaaagtgaccatgaaactgtagtgtgtaaggtgccactc 380
Query: 181 acagtgccctcactcggcagcaatgcacaacactatcaaagacagagactatcttggagg 240
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acagtgccctcactcaacagcaatgcacaacactatcaaagacagagactatcttggagg 440
Query: 241 tctctgatcttgtcttagcccacttcctggtgctatatcagaagagtaggctggtaattt 300
||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 441 tctctgatcttgtcttagcccacttcctggtgctagaacagaagagtaggctggtaattt 500
Query: 301 ataatgaaaaggaaattgtctaactcacagctctaaaggctgggaagctcaaggttgggc 360
||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||
Sbjct: 501 ataatgaaaaggaaattgtctaattcacagatctaaaggctgggaagttcaaggttgggc 560
Query: 361 ggccacaaaggctgaagtcttcttttgttttttgctgaggggacactcgtatagtcctga 420
||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 561 ggccacaaaggctgaagtcttcttttgttttttgctgaggggacact-gtagagtcctga 619
Query: 421 gatggctcagggaatcacatggcctaagagtctctttacttctccgagtccctttctctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gatggctcagggaatcacatggcctaagagtctctttacttctccgagtccctttctctt 679
Query: 481 taattac 487
|| ||||
Sbjct: 680 tatttac 686
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 489
Length of database: 888
Length adjustment: 10
Effective length of query: 479
Effective length of database: 878
Effective search space: 420562
Effective search space used: 420562
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no048_i10.g1 MSMg01no048_i10.g1 CHROMAT_FILE:
MSMg01no048_i10.g1 PHD_FILE: MSMg01no048_i10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:09:34 2005
(194 letters)
>mm_chr7_86223993_86224586
Length = 594
Score = 373 bits (193), Expect = e-108
Identities = 193/193 (100%)
Strand = Plus / Minus
Query: 1 tgcctattaacacaagacctgttcttgctgtttcacagatggagtgagatgtcttgccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 tgcctattaacacaagacctgttcttgctgtttcacagatggagtgagatgtcttgccag 334
Query: 61 tcagttcttctcatctgggctgggcactgtgcctttggcactgtacacacacaggctgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 tcagttcttctcatctgggctgggcactgtgcctttggcactgtacacacacaggctgta 274
Query: 121 gcatcagcagggacccaccagtgccactctctcccaccagcctgtgtgaaacacttagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 gcatcagcagggacccaccagtgccactctctcccaccagcctgtgtgaaacacttagaa 214
Query: 181 cccgtgaattggg 193
|||||||||||||
Sbjct: 213 cccgtgaattggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 194
Length of database: 594
Length adjustment: 8
Effective length of query: 186
Effective length of database: 586
Effective search space: 108996
Effective search space used: 108996
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
