Query= MSMg01no049_g09.b1 MSMg01no049_g09.b1 CHROMAT_FILE:
MSMg01no049_g09.b1 PHD_FILE: MSMg01no049_g09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:11:22 2005
(442 letters)
>mm_chr14_47219024_47219865
Length = 842
Score = 795 bits (411), Expect = 0.0
Identities = 432/443 (97%), Gaps = 9/443 (2%)
Strand = Plus / Plus
Query: 1 ggtagagggaattgactccagtcttcggcaagacacagagcatgctcttaaccattgagc 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 202 ggtagagggaattgactccagtcttcggcaaga-acagagcatgctcttaaccattgagc 260
Query: 61 atctctccagcctctagatcttatttatttatctacttggcaataaagattgtttttttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atctctccagcctctagatcttatttatttatctacttggcaataaagattgtttttttt 320
Query: 121 atttgtgtgtatgaatgtatattcaccatgtgattgcatgctcctgtggagactagacct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atttgtgtgtatgaatgtatattcaccatgtgattgcatgctcctgtggagactagacct 380
Query: 181 gggtgttagatcctctgcaactgaagttgcaggcagttatgggctgccagatatgaatgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gggtgttagatcctctgcaactgaagttgcaggcagttatgggctgccagatatgaatgt 440
Query: 241 tgggaattgaactagtgtcctaagaacagaaactgtcctaacaaaatcactgaatcgtct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgggaattgaactagtgtcctaagaacagaaactgtcctaacaaaatcactgaatcgtct 500
Query: 301 ctacagtcccccttggatttttgttaatttt----catagaagctaccatctcacttata 356
||||||||||||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 501 ctacagtcccccttggatttttgttaa----gcaacatagaagctaccatctcaattata 556
Query: 357 ttctaactaataatccttacccttaatatttttatcctcgccattacatgctgtcatttt 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ttctaactaataatccttacccttaatatttttatcctcgccattacatgctgtcatttt 616
Query: 417 gtgttcctttaacctgtatataa 439
|||||||||||| ||||||||||
Sbjct: 617 gtgttcctttaatctgtatataa 639
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 842
Length adjustment: 9
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no049_g09.g1 MSMg01no049_g09.g1 CHROMAT_FILE:
MSMg01no049_g09.g1 PHD_FILE: MSMg01no049_g09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:11:22 2005
(327 letters)
>mm_chr7_17543872_17544598
Length = 727
Score = 555 bits (287), Expect = e-162
Identities = 317/327 (96%)
Strand = Plus / Minus
Query: 1 aagcaaatgtgtatcatctgtgcagctagagttccatggtcctcatgtccctttgtctgt 60
||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 527 aagcaaatgtgtatcgtctgtacagctagagttccatggtcctcacgtccctttgtctgt 468
Query: 61 attctctaacatagaaagggtggattgggagcgatggggaggagagatgcctcacaggga 120
|||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 attctctaacatggaaaaggtggattgggagcgatggggaggagagatgcctcacaggga 408
Query: 121 ccccgtggcttggaggatgtatctatgggcaaggtcaagtgcagctaggaggaagggcag 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 407 ccccgtggcttggaggatgtatctatgggcaaggtcaagtgcagccaggaggaagggcag 348
Query: 181 tgcaggaagtcatctccctagataagtgggatcttgcagttctgtgtgctcttcaaggcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 tgcaggaagtcatctccctagataagtgggatcttgcagttctgtgtgctcttcaaggcc 288
Query: 241 atctactgcaggatggatgtggctaaaccatggggagctctgagagccctgaatctcctt 300
|||| ||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||
Sbjct: 287 atctgctgcaggatggatgtggctaaaccatggggacctctgggagccctgaacctcctt 228
Query: 301 cttgacttcacaactcctgggagggtg 327
|||||||||||||||||||||||||||
Sbjct: 227 cttgacttcacaactcctgggagggtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 727
Length adjustment: 9
Effective length of query: 318
Effective length of database: 718
Effective search space: 228324
Effective search space used: 228324
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
