Query= MSMg01no050_m01.b1 MSMg01no050_m01.b1 CHROMAT_FILE:
MSMg01no050_m01.b1 PHD_FILE: MSMg01no050_m01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:49:29 2005
(659 letters)
>mm_chr7_64960504_64961562
Length = 1059
Score = 1056 bits (546), Expect = 0.0
Identities = 585/608 (96%), Gaps = 16/608 (2%)
Strand = Plus / Minus
Query: 1 agatctagttgattcaaatagatactgttctacgcatgggtaacagaagaaaatggaatc 60
|||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 608 agatctagttgattcaaatagatagtgttctatgcatgggtaacagaagaaaatggaatc 549
Query: 61 aaacaagaatgttcagcctcagccccatccaccaataaaaacctttcatctctgttgctg 120
||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||
Sbjct: 548 aaacaagaatgttcagcctcacccccatccaccaataaaaacctttcgtctctgttgctg 489
Query: 121 ggtttcccagctgttacacctgcaccacaacacaaatggccctatttttagcttcgtata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 ggtttcccagctgttacacctgcaccacaacacaaatggccctatttttagcttcgtata 429
Query: 181 acttgagtaaaatctcagaacaattgggcataattactatgcctcttactgtcagagtgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 acttgagtaaaatctcagaacaattgggcataattactatgcctcttactgtcagagtgc 369
Query: 241 ctttccgcagactttgaaggccagaagaccccccctgggcctgcatccctcaccaacaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ctttccgcagactttgaaggccagaagaccccccctgggcctgcatccctcaccaacaac 309
Query: 301 tttgcttctgccctcacaaaagacaagagggcttcatctctaagataggtacctagcaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 tttgcttctgccctcacaaaagacaagagggcttcatctctaagataggtacctagcaga 249
Query: 361 ctgttgtcataacaatctcatcccaaatttatccagaaagag----------------gg 404
||||||||||||| |||||||||||||||||||||||||||| ||
Sbjct: 248 ctgttgtcataacgatctcatcccaaatttatccagaaagagggatggatttgtgtgagg 189
Query: 405 atgggaaggcactaccaagcacaggtgtgaatctgataccctgctgagctccagagtgaa 464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 atgggaaggcactaccaagcacaggtgtgaatctgataccctgctgagctccagagtgaa 129
Query: 465 gaaattcttcatttgttttaaggtcattatgaaataagtacaaggcttgccaaaaataaa 524
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 128 gaaattcttcatttgttttaaggtcattatgaaataagtacaaggcttgcaaaaaataaa 69
Query: 525 acaacgtgagcaagaaaaaggaagaaaataaggaagatctgaaggagggagggatgaaca 584
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 acaacatgagcaagaaaaaggaagaaaataaggaagatctgaaggagggagggatgaaca 9
Query: 585 gatgagca 592
||||||||
Sbjct: 8 gatgagca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1059
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1049
Effective search space: 680801
Effective search space used: 680801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no050_m01.g1 MSMg01no050_m01.g1 CHROMAT_FILE:
MSMg01no050_m01.g1 PHD_FILE: MSMg01no050_m01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:49:30 2005
(668 letters)
>mm_chr7_64862072_64863140
Length = 1069
Score = 1222 bits (632), Expect = 0.0
Identities = 659/675 (97%), Gaps = 15/675 (2%)
Strand = Plus / Plus
Query: 1 ttttcccctggtttggggacagagtcttgtcatg----ccatttcagattgacctcaaac 56
|||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 201 ttttcccctggtttggggacagagtcttgtcatggtagc----tcagattgacctcaaac 256
Query: 57 acgctatcctcctgcctcagtcttctgaggtcagagataaacctgcacctcatgtgagat 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 acgctatcctcctgcctcagtcttctgaggtcagagataaacctgcacctcatgtgagat 316
Query: 117 ttctagattatttagcactgtgtcaggtataggaactttgttcctgtaagatattctgtg 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 ttctagattatttagcactgtgtcaggtataggaactttgttcctgtaagatattctgtg 376
Query: 177 ttcttcacaaggactcatgtgtttaacatagacaaaatacctctctatcaggactttgag 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ttcttcacaaggactcatgtgtttaacatagacaaaatacctctctatcaggactttgag 436
Query: 237 tacttccatacttgtagtacgtttataaaatcatcttttataattttccaaaaaagaaaa 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tacttccatacttgtagtacgtttataaaatcatcttttataattttccaaaaaagaaaa 496
Query: 297 gagttttgtcttacaatgaaaaaaa-tggaatatatagaaaaatataattacatgcatga 355
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 497 gagttttgtcttacaatgaaaaaaaatggaatatatagaaaaatataattacatgcatga 556
Query: 356 aaagattttatgcacattatatatatatat--gtatatatgtatatatatatatacatta 413
|||||||||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 557 aaagattttatgcacattatatatatatatatgtatatatgtatatatatatat----ta 612
Query: 414 ccatcaatcataccttaatgctatagatgatttgagactattaaatgtattttaagaaca 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 ccatcaatcataccttaatgctatagatgatttgagactattaaatgtattttaagaaca 672
Query: 474 atatactattctcttgcaatctgaataatgtattttacttatttactttcttttaaatta 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 atatactattctcttgcaatctgaataatgtattttacttatttactttcttttaaatta 732
Query: 534 tttctacttatttattttcatttttctcccttgatgtgtatatgggaatcagagggtaat 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 tttctacttatttattttcatttttctcccttgatgtgtatatgggaatcagagggtaat 792
Query: 594 ttgtgagagttggtttctcctctcactgtgtaagtcctacacagaanactcaggcgatca 653
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 793 ttgtgagagttggtttctcctctcactgtgtaagtcctacacagaaaactcaggcgatca 852
Query: 654 ggcttggcactaatt 668
|||||||||||||||
Sbjct: 853 ggcttggcactaatt 867
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1069
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1059
Effective search space: 696822
Effective search space used: 696822
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
