Query= MSMg01no052_l07.b1 MSMg01no052_l07.b1 CHROMAT_FILE:
MSMg01no052_l07.b1 PHD_FILE: MSMg01no052_l07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:53:24 2005
(187 letters)
>mm_chr7_78936514_78937100
Length = 587
Score = 350 bits (181), Expect = e-101
Identities = 184/185 (99%), Gaps = 1/185 (0%)
Strand = Plus / Minus
Query: 1 ctacataaccggttccaggatggtcaactacacagagaaaccatgtcttcacaagagaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ctacataaccggttccaggatggtcaactacacagagaaaccatgtcttcacaagagaaa 363
Query: 61 accagaacaaaatgaaataaataaacatatgttattgacaggtctggcatttaaaattct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 accagaacaaaatgaaataaataaacatatgttattgacaggtctggcatttaaaattct 303
Query: 121 aggatattcccatcattctatgtcactcagcttttgttttttggtggtggtggtggtggt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 aggatattcccatcattctatgtcactcagcttttgttttttggtggtggtggtggtgg- 244
Query: 181 ggggg 185
|||||
Sbjct: 243 ggggg 239
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 187
Length of database: 587
Length adjustment: 8
Effective length of query: 179
Effective length of database: 579
Effective search space: 103641
Effective search space used: 103641
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no052_l07.g1 MSMg01no052_l07.g1 CHROMAT_FILE:
MSMg01no052_l07.g1 PHD_FILE: MSMg01no052_l07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:53:24 2005
(343 letters)
>mm_chr7_78789145_78789889
Length = 745
Score = 644 bits (333), Expect = 0.0
Identities = 340/343 (99%), Gaps = 2/343 (0%)
Strand = Plus / Plus
Query: 1 tcatggaaacttgactggaatatcttcagactcttcagttagaacttacttattattgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcatggaaacttgactggaatatcttcagactcttcagttagaacttacttattattgcc 260
Query: 61 tacccttaaaagcgccttacttaacatcagagaattcctagtaactggcaagaaaggagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tacccttaaaagcgccttacttaacatcagagaattcctagtaactggcaagaaaggagt 320
Query: 121 cattgtctcagatactgtctgaccatgtcccagaagaaactagaaaattcatacctgctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cattgtctcagatactgtctgaccatgtcccagaagaaactagaaaattcatacctgctg 380
Query: 181 cttcagtccactcttatgcctcttccactctgaataatgcattgtcttgaattgagataa 240
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctttagtccactcttatgcctcttccactctgaataatgcattgtcttgaattgagataa 440
Query: 241 gaatataga--tatgtgcattgccatgaaaattaaataacttaaagtctttatgctccac 298
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaatatagaactatgtgcattgccatgaaaattaaataacttaaagtctttatgctccac 500
Query: 299 tataagattcaaaaacgtaaaaaatgtatgctccccattgaag 341
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tataagattcaaaaacgtaaaaaatgtatgctccccattgaag 543
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 745
Length adjustment: 9
Effective length of query: 334
Effective length of database: 736
Effective search space: 245824
Effective search space used: 245824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
