Query= MSMg01no052_o18.b1 MSMg01no052_o18.b1 CHROMAT_FILE:
MSMg01no052_o18.b1 PHD_FILE: MSMg01no052_o18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:53:41 2005
(648 letters)
>mm_chr7_104953093_104954139
Length = 1047
Score = 1201 bits (621), Expect = 0.0
Identities = 642/651 (98%), Gaps = 5/651 (0%)
Strand = Plus / Minus
Query: 2 gaattccaggacagccattcctacaaagtgaattccaggacagccagggctacacagcct 61
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 931 gaattccaggacagccagggctacaaagtgaattccaggacagccagggctacacagcct 872
Query: 62 gtctcaaaaaac----aaaaaaataaaaaaaaagcataaaaaaataaaaaagctgaatcc 117
|||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 871 gtctcaaaaaacaaaaaaaaaaaaaaaaaaaaagcataaaaaaataaaaaagctgaatcc 812
Query: 118 aaatggtgtttaccaccccacccccccaaccccaaggtactcaggatacttcagggcagc 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 aaatggtgtttaccaccccacccccccaaccccaaggtactcaggatacttcagggcagc 752
Query: 178 aaggagacaaggccctgaacttcacaagtgttatatactgtaactacttctccatgtatc 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 aaggagacaaggccctgaacttcacaagtgttatatactgtaactacttctccatgtatc 692
Query: 238 ctaatgcaaacctatgaagcagtacaatcagtacagctttagtaaagaaactaaaactgc 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 ctaatgcaaacctatgaagcagtacaatcagtacagctttagtaaagaaactaaaactgc 632
Query: 298 tggatttagcactcctataccagtcaagacatggcggcatctcagctttcagagacaggc 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 tggatttagcactcctataccagtcaagacatggcggcatctcagctttcagagacaggc 572
Query: 358 caggggcagaggtttaactgctacaccatacagagaggagaaagtttaaatcgacgtctt 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 caggggcagaggtttaactgctacaccatacagagaggagaaagtttaaatcgacgtctt 512
Query: 418 tgttgaagtataacatatggaataaatttggcatgagccttttgtgggttttttttgctt 477
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 511 tgttgaagtataacatatggaataaatttggcatgagccttttgtggg-tttttttgctt 453
Query: 478 tgttttcttgtctttctttttacataaggtgagaaattaaacttcccagatctaaacagc 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 tgttttcttgtctttctttttacataaggtgagaaattaaacttcccagatctaaacagc 393
Query: 538 atattcagcttatagcttctatggtttcaaaaacagtataaaaaggtgtctagtccaact 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 atattcagcttatagcttctatggtttcaaaaacagtataaaaaggtgtctagtccaact 333
Query: 598 attagtgaaaagatattctgaaggctgtaccatggagctcttacccaacaa 648
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 attagtgaaaagatattctgaaggctgtaccatggagctcttacccaacaa 282
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1047
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1037
Effective search space: 661606
Effective search space used: 661606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no052_o18.g1 MSMg01no052_o18.g1 CHROMAT_FILE:
MSMg01no052_o18.g1 PHD_FILE: MSMg01no052_o18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:53:41 2005
(554 letters)
>mm_chr7_104791424_104792377
Length = 954
Score = 1064 bits (550), Expect = 0.0
Identities = 553/554 (99%)
Strand = Plus / Plus
Query: 1 cttatgggaggaacactaattgaataggaatagagttgatatagaataatttaaggagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttatgggaggaacactaattgaataggaatagagttgatatagaataatttaaggagat 260
Query: 61 gtctatttttaaacatataaagaattaatttggggaagatatgtggatgtgtgttgggat 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtctatttttagacatataaagaattaatttggggaagatatgtggatgtgtgttgggat 320
Query: 121 taaaagggctgagatatacattatagtgcagaattgagtcccaaagaaacaaggtcattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taaaagggctgagatatacattatagtgcagaattgagtcccaaagaaacaaggtcattt 380
Query: 181 acttttatattatacagaaatggttgttttctgctagatgctgtcacggtgttttcttat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acttttatattatacagaaatggttgttttctgctagatgctgtcacggtgttttcttat 440
Query: 241 taaacctagtttatgtaaagtaagttttaaaagtgggattaatcttcatagaaactctgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taaacctagtttatgtaaagtaagttttaaaagtgggattaatcttcatagaaactctgg 500
Query: 301 tgatgaggaaaagcaaataatccaagcagaagtctggctttttgctttctaggctacact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgatgaggaaaagcaaataatccaagcagaagtctggctttttgctttctaggctacact 560
Query: 361 tggggctttttgtttgtttgtttgtttttctttaactagagaatgtaactttttactaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tggggctttttgtttgtttgtttgtttttctttaactagagaatgtaactttttactaag 620
Query: 421 aaaattaataggcaagtttcctttacttgaaacagcttctgtagagaactcctttggtgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaaattaataggcaagtttcctttacttgaaacagcttctgtagagaactcctttggtgg 680
Query: 481 tggttttagtaacaagatccttcccctcagtgaggccgcagtttggaacatgtttctgca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tggttttagtaacaagatccttcccctcagtgaggccgcagtttggaacatgtttctgca 740
Query: 541 tcatcgtgaccagg 554
||||||||||||||
Sbjct: 741 tcatcgtgaccagg 754
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 554
Length of database: 954
Length adjustment: 10
Effective length of query: 544
Effective length of database: 944
Effective search space: 513536
Effective search space used: 513536
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
