Query= MSMg01no053_i22.b1 MSMg01no053_i22.b1 CHROMAT_FILE:
MSMg01no053_i22.b1 PHD_FILE: MSMg01no053_i22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:54:30 2005
(323 letters)
>mm_chr7_117308720_117309442
Length = 723
Score = 509 bits (263), Expect = e-148
Identities = 302/317 (95%), Gaps = 4/317 (1%)
Strand = Plus / Plus
Query: 5 gaattcctatttatttatctattttcttatttatcaccgtctgtaaacaggctttgaagg 64
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 gaattcctatttatt----tattttcttatttatcaccgtctgtaaacaggctttgaagg 264
Query: 65 cagcatgtgttataagacgcatttattcaagcctaccaggggtccttaacctgggggttg 124
||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cagcatgtgttataagatgtgtttattcaagcctaccaggggtccttaacctgggggttg 324
Query: 125 actcaagtagaacattttaggatccagggttgctcatgaaactgggtgagctgtttcaac 184
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 325 actcaagtagaacattttaggatccagggttattcatgaaactgggtgagctgtttcaac 384
Query: 185 ttttaggcagacgtgcagtgtttttggaacgaagtccagtagtttttctgattaccaaag 244
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 385 ttttaggcagacgtgcagtgtttttggaaggaagtccagtagtttttctgattaccaaag 444
Query: 245 agttcttaagtttagtttgtgggtccagggctcataacttatggctcagcgattaaagca 304
||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||
Sbjct: 445 agttcttaagtttagtttgtgggtccagggctcggaacaaatggctcagtgattaaagca 504
Query: 305 cttactgttcttccgga 321
|||||||||||||||||
Sbjct: 505 cttactgttcttccgga 521
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 723
Length adjustment: 9
Effective length of query: 314
Effective length of database: 714
Effective search space: 224196
Effective search space used: 224196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no053_i22.g1 MSMg01no053_i22.g1 CHROMAT_FILE:
MSMg01no053_i22.g1 PHD_FILE: MSMg01no053_i22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:54:30 2005
(322 letters)
>mm_chr9_21056215_21056936
Length = 722
Score = 600 bits (310), Expect = e-176
Identities = 321/328 (97%), Gaps = 6/328 (1%)
Strand = Plus / Minus
Query: 1 agggtcttttactgtaggtgttttgcagcctctgggcctttgcctgcgctctccgagtct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 agggtcttttactgtaggtgttttgcagcctctgggcctttgcctgcgctctccgagtct 354
Query: 61 gctgtgtgatggttcggtcctctcctttctcacccaacatgtgaggtgaaatgagtgtgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 gctgtgtgatggttcggtcctctcctttctcacccaacatgtgaggtgaaatgagtgtgg 294
Query: 121 cagaaccagagggctgtccccaggcttccaaatctagtatttggaagggaaggggttcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 cagaaccagagggctgtccccaggcttccaaatctagtatttggaagggaaggggttcac 234
Query: 181 aggggtcacctggagggaacactaggaccccatctcctctttttcctccttttcctcctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 aggggtcacctggagggaacactaggaccccatctcctctttttcctccttttcctcctt 174
Query: 241 ttcctcctcttcttcctcctcttcctcctcctcctcctcctc------ttcctccattct 294
|||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 173 ttcctcctcttcctcctcctcttcctcctcctcctcctcctcctcctcttcctccattct 114
Query: 295 tggcttttgttttgaagcacacacaccc 322
||||||||||||||||||||||||||||
Sbjct: 113 tggcttttgttttgaagcacacacaccc 86
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 722
Length adjustment: 9
Effective length of query: 313
Effective length of database: 713
Effective search space: 223169
Effective search space used: 223169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
