Query= MSMg01no054_j11.b1 MSMg01no054_j11.b1 CHROMAT_FILE:
MSMg01no054_j11.b1 PHD_FILE: MSMg01no054_j11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:55:48 2005
(104 letters)
>mm_chr7_117244120_117244623
Length = 504
Score = 192 bits (99), Expect = 7e-54
Identities = 102/103 (99%)
Strand = Plus / Plus
Query: 1 aacacaacaaaactctgtaccccgagccccaaggcactaaagaacgactccggaaactgc 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 201 aacacaacaaaactctgtaccccgagccccaaggcactaaagaaagactccggaaactgc 260
Query: 61 tctatgctgggttgcagcctcagtcccccacttgccacagaaa 103
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctatgctgggttgcagcctcagtcccccacttgccacagaaa 303
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 104
Length of database: 504
Length adjustment: 8
Effective length of query: 96
Effective length of database: 496
Effective search space: 47616
Effective search space used: 47616
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
| Query= MSMg01no054_j11.g1 MSMg01no054_j11.g1 CHROMAT_FILE:
MSMg01no054_j11.g1 PHD_FILE: MSMg01no054_j11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:55:49 2005
(350 letters)
>mm_chr7_117368399_117369148
Length = 750
Score = 619 bits (320), Expect = 0.0
Identities = 329/332 (99%), Gaps = 1/332 (0%)
Strand = Plus / Minus
Query: 1 caggacagccagggctacacaaagaaaccctctttcaggag-aaaaaaaaaagataaaca 59
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 466 caggacagccagggctacacaaagaaaccctctttcaggagaaaaaaaaaaagataaaca 407
Query: 60 aaacatggtttccatctacagtctgagcacctgaaagggagagacaggaagatggctgta 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 aaacatggtttccatctacagtctgagcacctgaaagggagagacaggaagatggctgta 347
Query: 120 agtttaaagcctacctaatctactacacagcaagttctagcccattgagagatatacaga 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 agtttaaagcctacctaatctactacacagcaagttctagcccattgagagatatacaga 287
Query: 180 aagattctgtctgaaaaataaaatatatacattataaatggaagtatagctcagtgataa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 aagattctgtctgaaaaataaaatatatacattataaatggaagtatagctcagtgataa 227
Query: 240 agagcttgtttagaatgtagtaagtcctgggctcaattttcagtactacaaaagtaggag 299
|||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 226 agagcttgcttagaatgtagtaagccctgggctcaattttcagtactacaaaagtaggag 167
Query: 300 cagtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 331
||||||||||||||||||||||||||||||||
Sbjct: 166 cagtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 135
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 1
Length of query: 350
Length of database: 750
Length adjustment: 9
Effective length of query: 341
Effective length of database: 741
Effective search space: 252681
Effective search space used: 252681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
