Query= MSMg01no054_k08.b1 MSMg01no054_k08.b1 CHROMAT_FILE:
MSMg01no054_k08.b1 PHD_FILE: MSMg01no054_k08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:55:53 2005
(342 letters)
>mm_chr7_89745692_89746433
Length = 742
Score = 607 bits (314), Expect = e-178
Identities = 335/342 (97%)
Strand = Plus / Plus
Query: 1 caaaggccctcagctaatttttctttcctgcttatactgaggcctaaatttgcacagtca 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 caaaggccctcagctaatttttctttcctgcttatactgaggcctaaatttgtacagtca 260
Query: 61 gctcagttcttccctgtaccttcctcttttcaagaatcccgctgagccaagcagctccca 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 261 gctcagttcttccctgtaccttcctcttttcaagaatcccactgagccaagcagctccca 320
Query: 121 atgctagccacttatctgcgggatcagttactagcttctctccactatccatcaaccctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgctagccacttatctgcgggatcagttactagcttctctccactatccatcaaccctg 380
Query: 181 aaactcaaactttacaaccttcctaaaatcctgttctcatcactagatgagtccctctgt 240
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 381 aaactcaaactttacaaccttcctaaaatcctgttctcatcaccagatgagtccctctgt 440
Query: 241 ggactattattccttctcctattccagagttcctggagtagggaggagctgagtctaacc 300
||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggactatgactccttctcctagtccagagttcctggagtagggaggagctgagtctaacc 500
Query: 301 aacctgcttctcccagttccttttctattagtgatggatgta 342
|||||||||||||||||||||||||||||||||||| |||||
Sbjct: 501 aacctgcttctcccagttccttttctattagtgatgaatgta 542
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 742
Length adjustment: 9
Effective length of query: 333
Effective length of database: 733
Effective search space: 244089
Effective search space used: 244089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no054_k08.g1 MSMg01no054_k08.g1 CHROMAT_FILE:
MSMg01no054_k08.g1 PHD_FILE: MSMg01no054_k08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:55:53 2005
(336 letters)
>mm_chr7_89875314_89876049
Length = 736
Score = 598 bits (309), Expect = e-175
Identities = 330/337 (97%), Gaps = 2/337 (0%)
Strand = Plus / Minus
Query: 1 tggctaacaccagtcttgatggcacgtgctggtgagcccagctctcagtgttaaggcctg 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 tggctaacaccggtcttgatggcacgtgctggtgagcccagctctcagtgttaaggcctg 477
Query: 61 cctaggctgtaagacgagtctgaggtcaggctgggcagcttagctcttgcaattacaaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 cctaggctgtaagacgagtctgaggtcaggctgggcagcttagctcttgcaattacaaac 417
Query: 121 aaaaggttagggctcagcgggcagtgctcccccaacacaccaagcctgagtcaggagtca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 aaaaggttagggctcagcgggcagtgctcccccaacacaccaagcctgagtcaggagtca 357
Query: 181 ggctggggaagggggcctgaaggacagaatcagctagatccttttattaaaactatttaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 ggctggggaagggggcctgaaggacagaatcagctagatccttttattaaaactatttaa 297
Query: 241 aacatgtatagaattaaattttcagtata-aggatacactggattttacatacgagaaat 299
|||||| || ||||||||||||||||| | ||||||||||||||||||||||| ||||||
Sbjct: 296 aacatgcatcgaattaaattttcagta-agaggatacactggattttacatacaagaaat 238
Query: 300 ttataaactgaaagtaggctcttgctaaacaacaacg 336
|||||| ||||||||||||||||||||||||||||||
Sbjct: 237 ttataagctgaaagtaggctcttgctaaacaacaacg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 336
Length of database: 736
Length adjustment: 9
Effective length of query: 327
Effective length of database: 727
Effective search space: 237729
Effective search space used: 237729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
