Query= MSMg01no054_l18.b1 MSMg01no054_l18.b1 CHROMAT_FILE:
MSMg01no054_l18.b1 PHD_FILE: MSMg01no054_l18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:55:59 2005
(576 letters)
>mm_chr7_69270895_69271870
Length = 976
Score = 1067 bits (552), Expect = 0.0
Identities = 572/582 (98%), Gaps = 6/582 (1%)
Strand = Plus / Minus
Query: 1 tacataaattatagttgaagactatcctggtttaatatagttttagttgaagagtcttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 tacataaattatagttgaagactatcctggtttaatatagttttagttgaagagtcttct 691
Query: 61 atagtagccatgactttagtacctctgattctttaactaggcttctagcaccaatcatga 120
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 690 atagtagccatgactttagtacctctgagtctttaactaggcttctagcaccaatcatga 631
Query: 121 tgttactcttgctgactaggccaaaatgcaattagagagatgtttcttcctttcttttaa 180
||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 tgttactattgctgaccaggccaaaatgcaattagagagatgtttcttcctttcttttaa 571
Query: 181 aaacacacataaagatagcattaagagtgtaatcaggtaatatttaagaacatatttgta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 aaacacacataaagatagcattaagagtgtaatcaggtaatatttaagaacatatttgta 511
Query: 241 tatatgtgtacatatatgcttccaataacaattgcttgaaaatgaggtcataaatttgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 tatatgtgtacatatatgcttccaataacaattgcttgaaaatgaggtcataaatttgaa 451
Query: 301 ggagagcatgtatatgaaagtattttaagaaggaaagggaaggcagaaatgttatatata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 ggagagcatgtatatgaaagtattttaagaaggaaagggaaggcagaaatgttatatata 391
Query: 361 ttattctgtcaaaagtaacagaaataggctggggaggtggctcagtggttaaaagaactg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 ttattctgtcaaaagtaacagaaataggctggggaggtggctcagtggttaaaagaactg 331
Query: 421 tctgcttttccagaggtctagagttcaatcttcaacaatagcatagtgttttaaaactaa 480
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 tctccttttccagaggtctagagttcaatcttcaacaatagcatagtgttttaaaactaa 271
Query: 481 gtatatatatatatat------ttaaaaccaagtatatatatatatatatgttggactct 534
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 270 gtatatatatatatatatatatttaaaaccaagtatatatatatatatatgttggactct 211
Query: 535 gatgccctcttgtgggcagatagaataatcatatataaaaag 576
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 gatgccctcttgtgggcagatagaataatcatatataaaaag 169
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 54
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 576
Length of database: 976
Length adjustment: 10
Effective length of query: 566
Effective length of database: 966
Effective search space: 546756
Effective search space used: 546756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no054_l18.g1 MSMg01no054_l18.g1 CHROMAT_FILE:
MSMg01no054_l18.g1 PHD_FILE: MSMg01no054_l18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:55:59 2005
(245 letters)
>mm_chr7_69093852_69094496
Length = 645
Score = 414 bits (214), Expect = e-120
Identities = 235/242 (97%)
Strand = Plus / Plus
Query: 1 attctttgaagatgctggttaccttgaacactcatagggccacaatgcccctctgaggag 60
||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 201 attctttgaagatgctggttaccttgaacactcatagggccacaatgtcactctgaggag 260
Query: 61 cctaccagacacacagatgttctatagggagacatgacaaaaaaggatgagcttggcaag 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctaccagacacacagatattctatagggagacatgacaaaaaaggatgagcttggcaag 320
Query: 121 cagacagtatctgtatctttggaataagcaaaaaaggcaggacttatgggaagaggcttt 180
|||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 321 cagacagtatctgtatctgtggaataagcaaaaaaggcaggacttatgtgaagaggcttt 380
Query: 181 taaaaagtgatatactggagtggtacaaaaagatgattaaatatagctggtctcgaggca 240
|||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 381 taaaaagtgatatactggagtgatgcaaaaagatgattaaatatagctggtctcgaggca 440
Query: 241 ga 242
||
Sbjct: 441 ga 442
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
