Query= MSMg01no054_n17.b1 MSMg01no054_n17.b1 CHROMAT_FILE:
MSMg01no054_n17.b1 PHD_FILE: MSMg01no054_n17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:56:08 2005
(627 letters)
>mm_chr7_76346750_76347776
Length = 1027
Score = 1145 bits (592), Expect = 0.0
Identities = 616/624 (98%), Gaps = 1/624 (0%)
Strand = Plus / Plus
Query: 5 gaattctagagctcccaacatgaacaggtctctcaacgaggcattcactgtatacaagct 64
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattctagagcacctaacatgaacaggtctctcaacgaggcattcactgtatacaagct 263
Query: 65 ccatagaaatgcagagtatccgtagacatgaggtaggaatgatgaaaagatttcaagagc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ccatagaaatgcagagtatccgtagacatgaggtaggaatgatgaaaagatttcaagagc 323
Query: 125 ttggttttgatgactacagtggatgaatatgcaagtgtgtaatctatagtccaggccatc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttggttttgatgactacagtggatgaatatgcaagtgtgtaatctatagtccaggccatc 383
Query: 185 aataggccatgagcattccacaaactatgagcaagaaagatcaggatgcagagctccaat 244
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 384 aataggccatgagcattccacaaactatgagcaagaaagatcaggatccagagctccaat 443
Query: 245 acaagagctcccttacattaatttagttaaactgatgctccagacacccttgcatgttta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 acaagagctcccttacattaatttagttaaactgatgctccagacacccttgcatgttta 503
Query: 305 aaaaccatcatgaggctagaagaaactgtttcttcttctggtaatgagtagtcttaaatg 364
||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||
Sbjct: 504 aaaaccatcatgaggctagaagaaactgtttctccttctggtaatgagtattcttaaatg 563
Query: 365 aataaataatttggttcacactaattcaacattggtgtccaaaactttcatcccatatgg 424
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 564 aataaataatttggttcacactaattcaacattggtttccaaaactttcatcccatatgg 623
Query: 425 ggtgtgtggaggggaaactgtgaagatatataacatttgaaatgtaaataaataaaataa 484
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ggtttgtggaggggaaactgtgaagatatataacatttgaaatgtaaataaataaaataa 683
Query: 485 ccaataattttttt-aaaatataccaatgataattaatgattcataagttatataagttt 543
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ccaataattttttttaaaatataccaatgataattaatgattcataagttatataagttt 743
Query: 544 acacataagacaaagagttaataaactacattatatgtttgctatacataaactatgtgc 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 acacataagacaaagagttaataaactacattatatgtttgctatacataaactatgtgc 803
Query: 604 atttgaaagatggaagatgtcact 627
||||||||||||||||||||||||
Sbjct: 804 atttgaaagatggaagatgtcact 827
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1027
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1017
Effective search space: 627489
Effective search space used: 627489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no054_n17.g1 MSMg01no054_n17.g1 CHROMAT_FILE:
MSMg01no054_n17.g1 PHD_FILE: MSMg01no054_n17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:56:08 2005
(585 letters)
>mm_chr7_76474320_76475304
Length = 985
Score = 1031 bits (533), Expect = 0.0
Identities = 554/561 (98%)
Strand = Plus / Minus
Query: 25 gaccaaacaggagagcttgctgacctagtaccattgtactacctccaataaatcattgac 84
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 985 gaccaaacaggagagcttgctgacctagtaccattgtactaccgccaataaatcattgac 926
Query: 85 tgattaaatgcatttgtgaatttatgcatatgtatatatgaatatgtatgtctacatctt 144
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 925 tgattaaatgtatttgtgaatttatgcatatgtatatatgaatatgtatgtctacatctt 866
Query: 145 taaaatattctaactaaagaaggggtcatgaatttgagatggagtgaaggacaggaggag 204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 taaaatattctaactaaagaaggggtcatgaatttgagatggagtgaaggacaggaggag 806
Query: 205 atggaagggagagaggaaagactacagtgctctgaagataagatccatgtgtaaaatctt 264
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 805 atggaagggagagaggaaagactacagtgctctgaagataagatccaagtgtaaaatctt 746
Query: 265 ccccaaatgtttaattcaaaatagtagactctctaatgcgcttttaaaaactctatgaat 324
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 caacaaatgtttaattcaaaatagtagactctctaatgcgcttttaaaaactctatgaat 686
Query: 325 ctttataaggagctccttgtctgtacactctggttgaggaagggatggttttgttgcgtt 384
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 685 ctttataaggagctccttgtctgtacactctggttgaggaagggatggttttgttgtgtt 626
Query: 385 gtggtaaatggcaatagcagaaaccagtaggaatgttacccttaaaagttaagaacctgt 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gtggtaaatggcaatagcagaaaccagtaggaatgttacccttaaaagttaagaacctgt 566
Query: 445 tctttatgggagttgaatgacattgtgggtaccaagtacacaccttgttccaggaagctc 504
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 565 tctttatgggagttgaatgacattgtgggtaccaagtacacaccttattccaggaagctc 506
Query: 505 aggggaggtactattgagccatcatttagccatctgcatgccaagttcagttcacagaaa 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aggggaggtactattgagccatcatttagccatctgcatgccaagttcagttcacagaaa 446
Query: 565 gctggaatcactacttgtctg 585
|||||||||||||||||||||
Sbjct: 445 gctggaatcactacttgtctg 425
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 985
Length adjustment: 10
Effective length of query: 575
Effective length of database: 975
Effective search space: 560625
Effective search space used: 560625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
