Query= MSMg01no055_c10.b1 MSMg01no055_c10.b1 CHROMAT_FILE:
MSMg01no055_c10.b1 PHD_FILE: MSMg01no055_c10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:56:29 2005
(313 letters)
>mm_chr7_71415173_71415885
Length = 713
Score = 522 bits (270), Expect = e-152
Identities = 285/290 (98%)
Strand = Plus / Plus
Query: 21 atggatattattggcacggggcgggggtggggcggaggggcagggcaccatctccgcatg 80
||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 221 atggatattattggcacggggcgggggtggggctgaggggcagggcaccatctaggcatg 280
Query: 81 tcaccacccaactatacacaaaggaacagaaaggacttttctggccaaaatggaggttag 140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 tcaccacccaactatacacaaaggaacagaaaggacttttctggccaaaatggaggttag 340
Query: 141 ttagtgcacagtactgcttataaggactcaagaaagtctccagcacacacacatacagag 200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 ttagtgcacagtactgcttataaggactcaagaaagtctccagcacacacacatacagag 400
Query: 201 cagagagcccaacccttgcctagaatcaccgatggctctcactgaagccatggacttcat 260
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 401 cagagagcccaacccttgcctagaatcaccgatggctctcactgaagccaaggacttcat 460
Query: 261 aaaaagaaccgttgtctggtagatccaagatctaagaacaaatggtggta 310
|||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 461 aaaaagaaccgttggctggtagatccaagatctaagaacaaatggtggta 510
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 713
Length adjustment: 9
Effective length of query: 304
Effective length of database: 704
Effective search space: 214016
Effective search space used: 214016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no055_c10.g1 MSMg01no055_c10.g1 CHROMAT_FILE:
MSMg01no055_c10.g1 PHD_FILE: MSMg01no055_c10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:56:29 2005
(171 letters)
>mm_chr7_71573698_71574271
Length = 574
Score = 271 bits (140), Expect = 2e-77
Identities = 165/176 (93%), Gaps = 7/176 (3%)
Strand = Plus / Minus
Query: 1 caagccaaggctatacagtgcatccacgtctcaaacaaacaaacaa-----ccctcccca 55
|||||||||||||||||||||| ||||||||||||||||| ||||| ||| |||||
Sbjct: 374 caagccaaggctatacagtgcaaccacgtctcaaacaaac-aacaaccccccccccccca 316
Query: 56 aaaaaaaatcaaggaaaaaaacaaatataatccaaacccataaggatcaatgaaaacatc 115
|||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 315 aaaaaaaatcaa-gaaaaaaacaaatataatccaaaccaataaggatcaatgaaaatatc 257
Query: 116 cctactagagaagtttatgactttaagggcctatatttttaaagaaatgagagtgg 171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 cctactagagaagtttatgactttaagggcctatatttttaaagaaatgagagtgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 171
Length of database: 574
Length adjustment: 8
Effective length of query: 163
Effective length of database: 566
Effective search space: 92258
Effective search space used: 92258
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
