Query= MSMg01no055_o09.b1 MSMg01no055_o09.b1 CHROMAT_FILE:
MSMg01no055_o09.b1 PHD_FILE: MSMg01no055_o09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:57:25 2005
(316 letters)
>mm_chr7_86024760_86025474
Length = 715
Score = 580 bits (300), Expect = e-170
Identities = 309/312 (99%), Gaps = 1/312 (0%)
Strand = Plus / Minus
Query: 4 ggaattcccacctactcgaatttacctgtttgtttactttacctctcagtgctggggagg 63
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ggaattcccacctact-gaatttacctgtttgtttactttacctctcagtgctggggagg 381
Query: 64 gcatggtaaaatgacgattcgtgccttgtggaggttgtacatttgttagttgattcatta 123
|||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 380 gcatggtaaaatgaagattcgtaccttgtggaggttgtacatttgttagttgattcatta 321
Query: 124 gaaaataattttgcaatgtgtatcaaaaactattggtttgttcacgccctttgggctagt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gaaaataattttgcaatgtgtatcaaaaactattggtttgttcacgccctttgggctagt 261
Query: 184 tctgaatattctgatgttaaatgcagggaataataactatacaaaagagcgtgtgtttgt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tctgaatattctgatgttaaatgcagggaataataactatacaaaagagcgtgtgtttgt 201
Query: 244 agctatgaggaaatgcctgacaaatgcctcttaaggaggaggaatttgtttggctgacaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 agctatgaggaaatgcctgacaaatgcctcttaaggaggaggaatttgtttggctgacaa 141
Query: 304 ttcaagtgtatg 315
||||||||||||
Sbjct: 140 ttcaagtgtatg 129
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 715
Length adjustment: 9
Effective length of query: 307
Effective length of database: 706
Effective search space: 216742
Effective search space used: 216742
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no055_o09.g1 MSMg01no055_o09.g1 CHROMAT_FILE:
MSMg01no055_o09.g1 PHD_FILE: MSMg01no055_o09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:57:25 2005
(485 letters)
>mm_chr7_85863216_85864100
Length = 885
Score = 915 bits (473), Expect = 0.0
Identities = 482/485 (99%)
Strand = Plus / Plus
Query: 1 cgcgtggagagtctctggcagagtctccaccagctggtaactctcagagtgttcctgaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cgcgtggagagtctctggcagagtctccaccagctggtaactctcagagtgttcctgaca 260
Query: 61 cttggtctgagccttaggcacactattcacaggcgagacccaggagctcctccttctacc 120
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 261 cttggtctgagccttaggcacactattcacaggcgaaacccaggagctcctccttctacc 320
Query: 121 tgaagactggtaggactctgagctggtggattgcaaccaggattctgaggctaagccaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgaagactggtaggactctgagctggtggattgcaaccaggattctgaggctaagccaca 380
Query: 181 cacggaagattctaggagctaagacaagcctctctgcagagcctggcttttctctctata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 381 cacggaagattctaggagctaagacaagcctctctgcagagcctggcttttctctctcta 440
Query: 241 tcctttactcattctctgtatgtactaggctgacacacatgaacaacatcacaccttcct 300
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 441 tcctttactcattctctgtatgtactaggctgacacacatgcacaacatcacaccttcct 500
Query: 301 acaattcagctatcctgaaactgtccaatagcactgaacacagcccagaacccagaaaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acaattcagctatcctgaaactgtccaatagcactgaacacagcccagaacccagaaaga 560
Query: 361 cacagaagtctctagattggacacagaacatagactgattctctgaaccacgtgcagcgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cacagaagtctctagattggacacagaacatagactgattctctgaaccacgtgcagcgc 620
Query: 421 cgtaagccttccctcggaccttatttccctttcctatgggctatttctccaactgagaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cgtaagccttccctcggaccttatttccctttcctatgggctatttctccaactgagaga 680
Query: 481 cacct 485
|||||
Sbjct: 681 cacct 685
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 485
Length of database: 885
Length adjustment: 10
Effective length of query: 475
Effective length of database: 875
Effective search space: 415625
Effective search space used: 415625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
