Query= MSMg01no056_e07.b1 MSMg01no056_e07.b1 CHROMAT_FILE:
MSMg01no056_e07.b1 PHD_FILE: MSMg01no056_e07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:57:53 2005
(243 letters)
>mm_chr7_30635174_30635816
Length = 643
Score = 406 bits (210), Expect = e-118
Identities = 236/246 (95%), Gaps = 3/246 (1%)
Strand = Plus / Minus
Query: 1 atgcctttggtagaagttatgggacattgaatgcatagggattaccatgttgcatttatc 60
||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 433 atgcctttggtagaaattatgggacattgaatgcatagggattaagatgttacatttatc 374
Query: 61 tgtctgtaacatgaagaataaccaagaacacagatagaacgatatctgtattgtaaagaa 120
||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||
Sbjct: 373 tgtctgtaacatgaagaataagcaagaacacagaaagaacgatatctgtattgtaaagaa 314
Query: 121 ggcttatcagaaaaggctttgctcaactctgtaagtcacatctctgtcatgagtcttttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 313 ggcttatcagaaaaggctttgctcaactctgtaagtcacatctctgtcatgagccttttg 254
Query: 181 acaattaaagctggttcagagacagtgaagtgtggctattg---ttattattattaggct 237
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 253 acaattaaagctggttcagagacagtgaagtgtggctattgttattattattattaggct 194
Query: 238 attatt 243
||||||
Sbjct: 193 attatt 188
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no056_e07.g1 MSMg01no056_e07.g1 CHROMAT_FILE:
MSMg01no056_e07.g1 PHD_FILE: MSMg01no056_e07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:57:53 2005
(410 letters)
>mm_chr7_30485082_30485891
Length = 810
Score = 762 bits (394), Expect = 0.0
Identities = 406/410 (99%)
Strand = Plus / Plus
Query: 1 aaggctagcctggagggtggagctctcaggacttgcactcactcgactccagggctctca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaggctagcctggagggtggagctctcaggacttgcactcactcgactccagggctctca 260
Query: 61 tgggacattatgtagaactttttgtcttcggcggccctttcgacctttgttttccagatg 120
|||||||||||||||||||||||||| |||| || |||||||||||||||||||||||||
Sbjct: 261 tgggacattatgtagaactttttgtcctcggtggtcctttcgacctttgttttccagatg 320
Query: 121 aggctattcgttctatgcaggcccatataaagtcaaagtgggttgagagcagaaatagtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggctattcgttctatgcaggcccatataaagtcaaagtgggttgagagcagaaatagtt 380
Query: 181 ctcagcacctaagggtggggacctagtgggtggggcaggattgtggaaccctaggcatta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctcagcacctaagggtggggacctagtgggtggggcaggattgtggaaccctaggcatta 440
Query: 241 ctgtttgaggcaccttgagtgtagtttgcagaaagagtcccctgcataactggaagcggg 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 441 ctgtttgaggcaccttgagtgtagtttgcagaaagagtcccctgcataactggaagtggg 500
Query: 301 aggggtgaccctacagaccagacccaccaactgtggactggggtccccaagggattacgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aggggtgaccctacagaccagacccaccaactgtggactggggtccccaagggattacgt 560
Query: 361 gtccagcgggctgttgtaacggaagatttcttcctccgtgtagtctctga 410
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtccagcgggctgttgtaacggaagatttcttcctccgtgtagtctctga 610
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 410
Length of database: 810
Length adjustment: 9
Effective length of query: 401
Effective length of database: 801
Effective search space: 321201
Effective search space used: 321201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
