Query= MSMg01no056_l24.b1 MSMg01no056_l24.b1 CHROMAT_FILE:
MSMg01no056_l24.b1 PHD_FILE: MSMg01no056_l24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:58:30 2005
(429 letters)
>mm_chr7_134690910_134691739
Length = 830
Score = 793 bits (410), Expect = 0.0
Identities = 425/430 (98%), Gaps = 2/430 (0%)
Strand = Plus / Plus
Query: 2 gaattcactgataagttgcgctaaaaag-aaaacaaaacaaaaacagtgctgttctacat 60
|||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 202 gaattcactgataagttgtgctaaaaagcaaaacaaaacaaaaacagtgctgttctacat 261
Query: 61 tatgtatctgtgttgtcagagaatatgtgagtagtttgataaaaatgtctaattgggagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tatgtatctgtgttgtcagagaatatgtgagtagtttgataaaaatgtctaattgggagc 321
Query: 121 tatctaaatttaaatacaaatttacatggatagtttctatatttataaatattctataat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tatctaaatttaaatacaaatttacatggatagtttctatatttataaatattctataat 381
Query: 181 atttatagtcagtttgggggttgaatttggtttatcatatacttctagttggaatgttag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 atttatagtcagtttgggggttgaatttggtttatcatatacttctagttggaatgttag 441
Query: 241 gggg-atagtcaccattgctcttttcagacacaccagaataggtcatcagacccatgagc 299
|||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 442 gggggatagtcaccattgctcttttcagacacaccagaagaggtcatcagacccatgagc 501
Query: 300 caccatgtggtgtctaggaattgaactcaggtcctctggaagagcagtcagtgctcttaa 359
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 caccatgtggtttctaggaattgaactcaggtcctctggaagagcagtcagtgctcttaa 561
Query: 360 ccactgagccatctccccagccccagaatgttagttcttattacacttcctactaataat 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 ccactgagccatctccccagccccagaatgttagttcttattacacttcctactaataat 621
Query: 420 tatattggtt 429
||||||||||
Sbjct: 622 tatattggtt 631
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 830
Length adjustment: 9
Effective length of query: 420
Effective length of database: 821
Effective search space: 344820
Effective search space used: 344820
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no056_l24.g1 MSMg01no056_l24.g1 CHROMAT_FILE:
MSMg01no056_l24.g1 PHD_FILE: MSMg01no056_l24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:58:30 2005
(252 letters)
>mm_chr7_134796566_134797217
Length = 652
Score = 435 bits (225), Expect = e-126
Identities = 246/253 (97%), Gaps = 2/253 (0%)
Strand = Plus / Minus
Query: 1 tctgggcatctacacaagctagcagagctcagtctttgggatagctcggctttcctttct 60
||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||
Sbjct: 452 tctgggcatctacacaagctagcggagctcagtctttgagatagctctgctttcctttct 393
Query: 61 gcagacccttcatcccagctgccatggtgactgcacaaactcattcctctttt-cccaca 119
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 392 gcagacccttcatcccagctgccatggtgactgcacaaactcattcctcttttccccaca 333
Query: 120 caatcctcagcatttggcctcatccggctccttgttggtggcccttctgactcagacaag 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 caatcctcagcatttggcctcatccggctccttgttggtggcccttctgactcagacaag 273
Query: 180 atgaaatctccagacctcctgactactggtatcacaggaatgcactgccccccagcccgg 239
|||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||
Sbjct: 272 atgaaatctccagacctcctgactactggtatcacaggcatgcactgccccc-agcctgg 214
Query: 240 acacttattggtt 252
|||||||||||||
Sbjct: 213 acacttattggtt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 252
Length of database: 652
Length adjustment: 9
Effective length of query: 243
Effective length of database: 643
Effective search space: 156249
Effective search space used: 156249
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
