Query= MSMg01no059_a22.b1 MSMg01no059_a22.b1 CHROMAT_FILE:
MSMg01no059_a22.b1 PHD_FILE: MSMg01no059_a22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:01:28 2005
(441 letters)
>mm_chr7_30097519_30098361
Length = 843
Score = 803 bits (415), Expect = 0.0
Identities = 434/441 (98%), Gaps = 2/441 (0%)
Strand = Plus / Plus
Query: 3 gaattccaggtcaggtagggctacataatgagaccctgtctcaagcaacaacagcaacaa 62
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gaattccaggtcaggcagggctacataatgagaccctgtctcaagcaacaacagcaacaa 262
Query: 63 cgacgacaaactcaaaaaccccaagaatgatgagcctttctttccctggctttccagctc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 cgacgacaaactcaaaaaccccaagaatgatgagcctttctttccctggctttccagctc 322
Query: 123 cttactcctaaccctcctccctacaggcatatggcattggaggtctccgcaaacgccagg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 cttactcctaaccctcctccctacaggcatatggcattggaggtctccgcaaacgccagg 382
Query: 183 acaccgcatccctggaggaccgagacaagccgtacgtctgtgatagtgagttctgcagag 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 acaccgcatccctggaggaccgagacaagccgtacgtctgtgatagtgagttctgcagag 442
Query: 243 gggaaagagagatgggggtttggggggg--cagtgacttctcccttatggccctcagcag 300
|||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||
Sbjct: 443 gggaaagagagatgggggttggggggggggcagtgacctctcccttatggccctcagcag 502
Query: 301 agcaggtggtgtgaacctggaggccagggtggaggaggtggccccggagtctgacaatca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 agcaggtggtgtgaacctggaggccagggtggaggaggtggccccggagtctgacaatca 562
Query: 361 cccactcacttcccccccagcctgtgggaagagatataagaaccggccaggactcagcta 420
||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 563 cccactcacttcccctccagtctgtgggaagagatataagaaccggccaggactcagcta 622
Query: 421 ccattacacccacacccacct 441
|||||||||||||||||||||
Sbjct: 623 ccattacacccacacccacct 643
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 843
Length adjustment: 9
Effective length of query: 432
Effective length of database: 834
Effective search space: 360288
Effective search space used: 360288
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no059_a22.g1 MSMg01no059_a22.g1 CHROMAT_FILE:
MSMg01no059_a22.g1 PHD_FILE: MSMg01no059_a22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:01:28 2005
(636 letters)
>mm_chr7_30241637_30242673
Length = 1037
Score = 675 bits (349), Expect = 0.0
Identities = 367/373 (98%), Gaps = 1/373 (0%)
Strand = Plus / Minus
Query: 264 gctcacctcctgaaataataaagggtaattaaaatttaaacttcacctcttttaagccag 323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1037 gctcacctcctgaaataataaagggtaattaaaatttaaacttcacctcttttaagccag 978
Query: 324 ccatggtggatcacaagtcctagtattctagactctgagatagaagggagttatcaggtt 383
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 977 ccatggtggatcacaagttctagtattctagactctgagatagaagggagttatcaggtt 918
Query: 384 caaggccatcctgagctatttactctcggacattctagaacaacccgtgcgacagattaa 443
|||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 917 caaggccatcctgagctatttactctaggacattctggaacaacccgtgcgacagattaa 858
Query: 444 gactctatctcaaaaacagaacatgtgcctcagtcccatcccgagaataaagaagccacc 503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 857 gactctatctcaaaaacagaacatgtgcctcagtcccatcccgagaataaagaagccacc 798
Query: 504 tcaacacttc-aaaaaaaaaaaagtgtacaattaatgttgtccatcacaagtactgtatc 562
|||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 797 tcaacacttcaaaaaaaaaaaaagtgtataattaatgttgtccgtcacaagtactgtatc 738
Query: 563 tgactggctgtgtgcattgagcctgtactaagctgcaaagactctgggaaaggaagcttc 622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 tgactggctgtgtgcattgagcctgtactaagctgcaaagactctgggaaaggaagcttc 678
Query: 623 atcctcctccaga 635
|||||||||||||
Sbjct: 677 atcctcctccaga 665
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1037
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1027
Effective search space: 642902
Effective search space used: 642902
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
