Query= MSMg01no059_e17.b1 MSMg01no059_e17.b1 CHROMAT_FILE:
MSMg01no059_e17.b1 PHD_FILE: MSMg01no059_e17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:01:46 2005
(627 letters)
>mm_chr7_122626346_122627369
Length = 1024
Score = 996 bits (515), Expect = 0.0
Identities = 537/545 (98%), Gaps = 3/545 (0%)
Strand = Plus / Minus
Query: 5 gaattctcatagtatgccataggctctgctgaatgaagagttatataggttattgaaaat 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gaattctcatagtatgcaataggctctgctgaatgaagagttatataggttattgaaaat 483
Query: 65 atatcaattatattagatagacaccatcactatttgaggattggcaggcatagtgttggt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 atatcaattatattagatagacaccatcactatttgaggattggcaggcatagtgttggt 423
Query: 125 agacgtgaacccacttgtccaacggaacagttaatcaggggcactgttgatgtttacgtt 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 422 agacgtgaacccacttgtccaacggaacagttaatcaggggcactgttgatgtttaagt- 364
Query: 185 aggctgatgtgggtagaaagtgcatctgccttaacactgtgcgcacacctcacaattaga 244
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 -ggctgatgtgggtagaaagtgcatctgccttaacactgtgcgcacacctcacaattaga 305
Query: 245 accccgagcaggacagtactgaaggcactgactccgagaaagccagtttcagctccaatg 304
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 a-cccgagcaggacagtactgaaggcactgactccgagaaagccagtttcagctccaatg 246
Query: 305 ttaggatgcctcagtcgttgttcctcagaagccccgcttacccttagaaaacttccttaa 364
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 ttagaatgcctcagtcgttgttcctcagaagccccgcttacccttagaaaacttccttaa 186
Query: 365 tctctctgcctgccagttttctatatgtagaataaggataaccacagcaccaataacatg 424
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 tctctctgcttgtcagttttctatatgtagaataaggataaccacagcaccaataacatg 126
Query: 425 agtccctctaaagatggaatggcttagcatatggaaaatgctaagaacagtgtctaacac 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 agtccctctaaagatggaatggcttagcatatggaaaatgctaagaacagtgtctaacac 66
Query: 485 gcagacacgtaaagattgttaaaaataaataaacctgtgtcaggtatttattttgtacta 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 gcagacacgtaaagattgttaaaaataaataaacctgtgtcaggtatttattttgtacta 6
Query: 545 cctca 549
|||||
Sbjct: 5 cctca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1024
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1014
Effective search space: 625638
Effective search space used: 625638
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no059_e17.g1 MSMg01no059_e17.g1 CHROMAT_FILE:
MSMg01no059_e17.g1 PHD_FILE: MSMg01no059_e17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:01:46 2005
(635 letters)
>mm_chr7_122542465_122543499
Length = 1035
Score = 1189 bits (615), Expect = 0.0
Identities = 630/635 (99%)
Strand = Plus / Plus
Query: 1 ctgggagttctgatctcaagccaaaattcatttagttgtttttttaaaaaataaaactca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgggagttctgatctcaagccaaaattcatttagttgtttttttaaaaaataaaactca 260
Query: 61 agtcagcatgtcaaatagcagtttttaaaaaccaaacattctaatccaatccaatccaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agtcagcatgtcaaatagcagtttttaaaaaccaaacattctaatccaatccaatccaat 320
Query: 121 aaccaatttgctatttttatgccatggaatgataataggaagatatcaagtccttatttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaccaatttgctatttttatgccatggaatgataataggaagatatcaagtccttatttt 380
Query: 181 ctgtaattaaatcattatatttacataagagctaaaagctttgtattaaaactactgcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgtaattaaatcattatatttacataagagctaaaagctttgtattaaaactactgcta 440
Query: 241 tttatattatgctttttactctcacaaacactgtctcaatgatccttctggaacattctt 300
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 441 tttatattatgctttttactctcacaaacactgtctcaatgatccttctgtaacattctt 500
Query: 301 ccttgtgtgtctatttttctatagtaaattcttgggtcagctaccgtacaaaaagatcac 360
|||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 501 ccttgtgtgtctatttttctatagtaaattcttgggtcagttactgtacaaaaagatcac 560
Query: 361 acatctttatgctcagtatctgatttgtgttttgcctcactgggtcaaaattcttgacag 420
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acatctttatgctcggtatctgatttgtgttttgcctcactgggtcaaaattcttgacag 620
Query: 421 aacaatttagacgggggcagagtttattctggctcaaggtttcagagggcaaagtgcatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aacaatttagacgggggcagagtttattctggctcaaggtttcagagggcaaagtgcatg 680
Query: 481 gtcacttgttttcacaagtgtaggctgaatgttgtgacaacaggaactagtgatggagga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gtcacttgttttcacaagtgtaggctgaatgttgtgacaacaggaactagtgatggagga 740
Query: 541 gaactattcaaggcatggccaatcaggaagcattctcgcagttgaggatcatagactcca 600
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gagctattcaaggcatggccaatcaggaagcattctcgcagttgaggatcatagactcca 800
Query: 601 aaggacctgccccagtgacctacttcctcctcagc 635
|||||||||||||||||||||||||||||||||||
Sbjct: 801 aaggacctgccccagtgacctacttcctcctcagc 835
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1035
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1025
Effective search space: 640625
Effective search space used: 640625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
