XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCA
TATGGCTCACCAAGTAAAACCATGAACAACCCAACTACTTCTTCCTCTCT
GGTACCCTTAGCTAATATCTCAGGATACTGGCTCCATTTTTTGGGATCCC
TGCCAGAATGTAAAAGGCTGCTCCCCATATCAATAAATTTTCCCCATCCA
GCTTTTCCCTTCATCCCATTTTGTCCAGCATCTACCCTCACCATTCATGA
CCGTGAATGCTTGCCTAGCTCCTGTTGGGCCTGTGAGTGGGTCTCACGGC
TCCTTTGGTTAGAGTCTTTACTGTGATTTACTGCTTTAGAGTTGTGCTGG
GTACATTTTACTCCTGTGTATTATAACCTCTCCACCCTGACTCATTTATT
GAGACAGAGTCCTGGTGTATAGCCTAGGTTGGCCTCGAACTCAGAATCCT
TCTGCTTCAGCCTCCAGAAGCCGGGATTACAGCCATACATGTGTATCAGC
ATGCTCACTGAGACAGCACTATCTCTCACTCACCAGGAACAATTCACTTT
TAGAGGAGTTAAACACCCTTTAAAAAAATGAATCATGGGTCATGTGTTCT
TGCATATATTATCAGTGGAATGCTTTCTATTTCTCTTTGTGACAACACCT
TTCTCATCTGGTCACTGCCAGGTTAAAGGATGTTTAGATAGGATTCAGCT
TTAAATGTGTTGAA

ATGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXAACTGTGTCCCCTCACTCATTTGTGTTTTCA
AAATTTGTTTCCAGTGAGAGCCCCTTCTATAACTAAGAGAATGCTATTTT
TACAATGAATGTTTCTAGGATGCTTACCAGGTGCTAGTCTAGTGTGTATG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTGTCTTTCTTTTTGT
CCCCTTCACATTCCCTAACTCCCCTACACTTCCCATCCTTCATTCGTTTA
GCCGTCTCTTTCTTTCTTCCTTGGATTTAATATACAATTAATTTCTAAAA
CACCAAGCGTTAATTTTTCCCTCATCCTGCGAACCCCTTTTTTTTACTCT
TTTTGCTTTTGTCCTGGTGCCCCCCCCCTTTGCGTTTTTTTTTGGGTTGC
CTGCTGTTTTTTCGCGTTCTTTCGTGTGACGCCCGTATGCCCCTTATTGT
TTTTTTCCCGTTGTTCCTTATTTTTTTCTCTCTGCTTGTCCCTTGCTCCT
GTCCCTCTCATTACAAACACTATCTTTTCTTTCATCACGCCCCACTTCTT
ATCATATATAATCCCCCCTTATTTCCCTTCCTTCTTTTTTTCTACTCTTC
TGCGCCTCTAACTCGTATTTCTATCATTCTCCTTATGTAATTGCCGCCCA
TTCCCGCCGCGCGCGACACGAGCATGCGGATTATTTACCTCGTTTGTGCG
GCGCTCTTTCCGTTCTGTTTTGTTCGCCCTGCTCCCCGTTAATTGTCTGT
CGTCCCCCTTTCCCCCCCTACANTTACTTTTACCTCTTTTGATCTTCATC
GGCGTTGTTGCTCTCCGTCTGCTCG

Query= MSMg01no061_i08.b1 MSMg01no061_i08.b1 CHROMAT_FILE:
MSMg01no061_i08.b1 PHD_FILE: MSMg01no061_i08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:04:31 2005
         (675 letters)



>mm_chr7_136904685_136905759
          Length = 1075

 Score = 1019 bits (527), Expect = 0.0
 Identities = 548/555 (98%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcatatggctcaccaagtaaaaccatgaacaacccaactacttcttcctctctggt 64
           |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 gaattcatatggctcaacaggtaaaaccatgaacaacccaactacttcttcctctctggt 496

                                                                       
Query: 65  acccttagctaatatctcaggatactggctccattttttgggatccctgccagaatgtaa 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 acccttagctaatatctcaggatactggctccattttttgggatccctgccagaatgtaa 436

                                                                       
Query: 125 aaggctgctccccatatcaataaattttccccatccagcttttcccttcatcccattttg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 aaggctgctccccatatcaataaattttccccatccagcttttcccttcatcccattttg 376

                                                                       
Query: 185 tccagcatctaccctcaccattcatgaccgtgaatgcttgcctagctcctgttgggcctg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 375 tccagcatctaccctcaccattcatgaccgtgaatgcttgcctagctcctgttgggccta 316

                                                                       
Query: 245 tgagtgggtctcacggctcctttggttagagtctttactgtgatttactgctttagagtt 304
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 315 tgagtgggtctcacggctcctttggttagagtctttactgtgatttactgctttagagct 256

                                                                       
Query: 305 gtgctgggtacattttactcctgtgtattataacctctccaccctgactcatttattgag 364
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 255 gtgctgggtacattttactcctgtgtattataacctctccaccctgactcattttttgag 196

                                                                       
Query: 365 acagagtcctggtgtatagcctaggttggcctcgaactcagaatccttctgcttcagcct 424
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 195 acagagtcctggtgtatagcctaggttggccttgaactcagaatccttctgcttcagcct 136

                                                                       
Query: 425 ccagaagccgggattacagccatacatgtgtatcagcatgctcactgagacagcactatc 484
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 135 ccagaagccgggattacagccatacatgtgtatcagcatgctcactaagacagcactatc 76

                                                                       
Query: 485 tctcactcaccaggaacaattcacttttagaggagttaaacaccctttaaaaaaatgaat 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75  tctcactcaccaggaacaattcacttttagaggagttaaacaccctttaaaaaaatgaat 16

                          
Query: 545 catgggtcatgtgtt 559
           |||||||||||||||
Sbjct: 15  catgggtcatgtgtt 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 675
Length of database: 1075
Length adjustment: 10
Effective length of query: 665
Effective length of database: 1065
Effective search space:   708225
Effective search space used:   708225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no061_i08.g1 MSMg01no061_i08.g1 CHROMAT_FILE:
MSMg01no061_i08.g1 PHD_FILE: MSMg01no061_i08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:04:31 2005
         (169 letters)



>mm_chr7_136804817_136805385
          Length = 569

 Score =  313 bits (162), Expect = 3e-90
 Identities = 162/162 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   aactgtgtcccctcactcatttgtgttttcaaaatttgtttccagtgagagccccttcta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aactgtgtcccctcactcatttgtgttttcaaaatttgtttccagtgagagccccttcta 260

                                                                       
Query: 61  taactaagagaatgctatttttacaatgaatgtttctaggatgcttaccaggtgctagtc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taactaagagaatgctatttttacaatgaatgtttctaggatgcttaccaggtgctagtc 320

                                                     
Query: 121 tagtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 162
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tagtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 362


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 169
Length of database: 569
Length adjustment: 8
Effective length of query: 161
Effective length of database: 561
Effective search space:    90321
Effective search space used:    90321
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)