Query= MSMg01no062_a02.b1 MSMg01no062_a02.b1 CHROMAT_FILE:
MSMg01no062_a02.b1 PHD_FILE: MSMg01no062_a02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:05:08 2005
(753 letters)
>mm_chr7_100791698_100792850
Length = 1153
Score = 785 bits (406), Expect = 0.0
Identities = 421/426 (98%)
Strand = Plus / Minus
Query: 1 actacatacagtataccaattttcaaaaacagactttgggagaattgaataaaaagataa 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 426 actacatacagtataccaattttcaaaaacagagtttgggagaattgaataaaaagataa 367
Query: 61 aaacatgaatctattacaaatccatttaaaaaatatttcaagtaacaaaagttgggaaga 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 366 aaacatgaatctattacaaatccattaaaaaaatatttcaagtaacaaaagttgggaaga 307
Query: 121 aaaatatgctgaatgaatgtcattaatttcaaaagtgggattgtcacatgactttgagac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 aaaatatgctgaatgaatgtcattaatttcaaaagtgggattgtcacatgactttgagac 247
Query: 181 aagtaactacaaagtttattatcaagaataatgatagaaaaactaggcctgagcatctgc 240
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 aagcaactacaaagtttattatcaagaataatgatagaaaaactaggcctgagcatctgc 187
Query: 241 ggtagacatcttgaatcccagactccacagagactactctgcacaggtgagagtgtggac 300
|| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 gggagacatcttggatcccagactccacagagactactctgcacaggtgagagtgtggac 127
Query: 301 tacagaagctaacagcttctgggacaggtaggagccacagagcttctgaggcagccccct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 tacagaagctaacagcttctgggacaggtaggagccacagagcttctgaggcagccccct 67
Query: 361 tttcaggctccagacatcaggcaccttccctgccagaggataggtgtatgcccagccagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 tttcaggctccagacatcaggcaccttccctgccagaggataggtgtatgcccagccagg 7
Query: 421 gagggc 426
||||||
Sbjct: 6 gagggc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 753
Length of database: 1153
Length adjustment: 10
Effective length of query: 743
Effective length of database: 1143
Effective search space: 849249
Effective search space used: 849249
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no062_a02.g1 MSMg01no062_a02.g1 CHROMAT_FILE:
MSMg01no062_a02.g1 PHD_FILE: MSMg01no062_a02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:05:08 2005
(803 letters)
>mm_chr7_100654484_100655686
Length = 1203
Score = 1419 bits (734), Expect = 0.0
Identities = 789/812 (97%), Gaps = 10/812 (1%)
Strand = Plus / Plus
Query: 1 tgcacttgcgcataaggcttgtttactagttccgcgcagtggaagccagcgccatcttat 60
||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 193 tgcacttgcgcataaggcttgtttactagttaggcgcagtggaagccagcaccatcttat 252
Query: 61 aatggcgattgctcatggcatggctctccacaataaataaggacaaaaataagttttcag 120
|||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 253 aatggcaattgctcatggcacggctctccacaataaataaggacaaaaataagttttcag 312
Query: 121 gataaatctggcttgg--------aaaaaaaaaaggtccaaatcaatctgatggcagtac 172
|||||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 313 gataaatccggcttgggaaaaaaaaaaaaaaaaaggtccaaatcaatctgatggcagtac 372
Query: 173 aagcaaggttgcttgctaacgtcatgagaggtgtagacagagaaaagattatttctcagt 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 aagcaaggttgcttgctaacgtcatgagaggtgtagacagagaaaagattatttctcagt 432
Query: 233 gataagcacagagcattagtgccttctgatcagaagacatcacaatctatttagttttta 292
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 433 gataagcacagagcattagtgccttctgatcggaagacatcacaatctatttagttttta 492
Query: 293 tgactagattaagtttctgaccttatagcaaagcttcaaagacacgtgaatagggagatt 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 tgactagattaagtttctgaccttatagcaaagcttcaaagacacgtgaatagggagatt 552
Query: 353 aaaacatcctaacagaatttaattaaagctataatgaacaccacttttatattatctgga 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 aaaacatcctaacagaatttaattaaagctataatgaacaccacttttatattatctgga 612
Query: 413 tgattttccagttccatctgtgtaatgttggaaaatttcactatagttcttgcatttttt 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 tgattttccagttccatctgtgtaatgttggaaaatttcactatagttcttgcatttttt 672
Query: 473 tt-cctatgagatacgtcagtgatttgctcaaggaacaagtgaatcatttttttctcctt 531
|| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 673 tttcctatgagatacgtcagtgatttgctcaaggaacaagtgaatcatttttt-ctcctt 731
Query: 532 tagaaccagagtcccttatccctgcaaggaaaccattgcagtgggcatcattgatagaat 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 tagaaccagagtcccttatccctgcaaggaaaccattgcagtgggcatcattgatagaat 791
Query: 592 tataaagaataaaaagcacaagatagtcatattttaaatgtagtaaaatttatctggtgg 651
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 tataaagaataaaaaccacaagatagtcatattttaaatgtagtaaaatttatctggtgg 851
Query: 652 gtatcttatagcagacatatgatactcactaatttagccacccttaatagtctcatagga 711
|||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 852 gtatcttatagcagacatatgatactcaataatttagccacccttaataatctcatagga 911
Query: 712 caggtaatttatgttaattttataaatggacagtaaccatcccactacttaagttcactg 771
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 912 catgtaatttatgttaattttataaatggacagtaaccatcccactacttaagttcacag 971
Query: 772 cccagccagtggaagagctgagatttgagtgt 803
| ||||||||||||||||||||||||||||||
Sbjct: 972 ctcagccagtggaagagctgagatttgagtgt 1003
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 803
Length of database: 1203
Length adjustment: 10
Effective length of query: 793
Effective length of database: 1193
Effective search space: 946049
Effective search space used: 946049
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
|
