NCCGATTTTNNNNGGCATTCGCGCTAAGACTCCTATGGGAGAGGATCCGC
GGAATTCCAGGGATTAGCCTTTCTCTTATAATTATGACTACAGACTAGGC
TATACAAGAACAAGACCCTCTTGAGAGCAATTCACGGCACAAATACCTTA
AGGTTTAATCAACTCAGGTTCAGGATATCTCAGATAACATCATCAGTGTG
GGCTTCCTTAATCAGGACATAAGGCCAAGATCCTGGGAGATGAAGGGAGG
TAATAGTTGAACTTCAGCAGGGTTATTGGCATTCTGGACCAGGTCACTCT
TATTTCTTAGGGGCCTTCTTGTGATCTGTGTGTTACCAGTAGCTGTGGAT
ATTACTCACTGTGTGCCAGAACCATCCCCCACAGGTAGCCACCAAAATTA
TGTCTGGGTTTATAACCTCTGAAGGGTGAGGATAAATGGCTTTGGCTCTG
AGCCATCACACAGTGAAGTCTCCCTGTGCCAGTGTGGAGCGTGAGGTCAG
TTCCGAGGGCTCCACTATACTGTGACTGTTCATACAATGGGTCAATCCCA
GAGCACCGGACTGAATAAACACCAGTTTTGTAGGAGAAACTAAGAGTGCT
TGGAATGGAGGAGAAACAGTTTGCAGGAAGGGGTGTTAGGAATGGATCCC
TGTTGGAGAGGGACAACCCTCTTTTTATTCTAGCTTTTCAGACTGGAACT
CCTTCCTTCCCCTCTTTCCTTTCTCTCTTCTGGGATTCATGTAACTTCCT
ACCCAGTATTTTTTAATTGTACTAAAATACTTATATAATACAGTACTTTA
GTCACTGAAACAGATGGTTCAGGGGCATTCCCAGTTTTGTACAACTATCG
TCAAGATCTCCCGTAGTATTTATTATTCCGAACGATCCTTTTCGTATCGT
TTCCTTTCCCATTCTTGAACATACATAAACCTGATCCCACTTGCCTTTAT
GTAAACCCCAATTTTTTCACCCCAAATCCTTGAATGTTTAATGGGAAATT
GGGTTGTCTCATGCGGCACATTGAGTAAAAAAATTTGCCCCCTTTTTTAT
TTAAATTGGGGCGTGTTTTATTTTTCATTTCTGATTAAGAATGTGGCTTG
TTTTAATTTTTTTCTTGTATTTTATGTTATGGTATAAGTCTTTTATACTT
CTTCTTATTCTTCTCATTACATTTTTTTCCTATATATTTAATTTCTCCGC
TTTTCCCATATTATTTAATACTGATTTTACTTACTTCTCTGGTTCTGTTT
TTT

NTTATACATGGAGGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXTGAGATAATTGAGACTGAGTCCAGCGCCTCAC
ATCAGTCCCGCATAGTCTCTGACATTCACAACAGACACAAAAATAACTAA
TGAGTGATGTCTCTACTCGCTCCACGGTCTAGGAACTCCTTCCCTGCACT
GGGAGCAAAGAGTGTTAACTTCAAGACTTTCAATGAAGTGACACTTCAAA
GACCACACAAGTATGAGGCCAAGCTCAGTAAGCGTCTGTGAGCCATCCCC
AACATGGCCACACTGTCTTTGTCTTGACACACAGAGAGTTACTACGAAGC
TTTGCTTTCAAAGATTCACTAAATTTAGTTCTATCCATTTCTGCTTGCTT
TATAATATTTATACTGTTCTTGCTGTTGTTTTGGTTTTGTTTGTTTTGAT
TTTTTTTTTCCCCCCCCCCCCGGNNAAANCTGACTTCAAAAAAAAAAAAC
GAGATGCCTTTGCCTCAAAAGTGTTGATGTCATTGTGCCCCGCCAGACCT
ATTTTTGGTATGCTTGTTTAAAATATTTTTAAAATAGCTGTGTGTATGAG
TGTTTGCCTGCATGTATGTAAGTGTATGCACCAGGCGTGTAGTATCTTGG
GAGATGCCCATGCCACTATATTGCTGATTTTCACCTACCTGCATTTCAAG
AAGCTATCCCAGGAATTATCAGAATCAGTAACTACTGATATCTTGTGGGC
TGTCGAATGTTTCTACAGACCAAGGCAAAACTCTAGTTCAAACACAGATC
TCTACATCCATGGCCTAAAGTTTGAGTCTTCAAACCTATTAATTCCAAAT
CATCCATTAAGTTTTATCATGGAAATTCTTAAATTTAACAGTTCAATTTC
TCAACAAGTATATATAGGCCTATTATAGGATTCTGAGTTTTAAATCTTTT
CCTTGGGTATATTTTTGTTTTTTCAGAATGTAAAACCTTTTCCTGCCCTT
TTTTTATACACCTATGACCCCCTTAAAAAATCTGGGCTTTTCCACCTTAA
TATGGTTTTTTTCAAAACTAATAACTAATCCTCCTTTTCATAAAACTCTT
CCCCAAAATGAAAAAATTTTCTCTCACAATCTGTTTTATTTCTTGTATGT
TCTTCAAAACATGTTTTTTATATATCCTCCTCACCCTTTACTATATTATC
ATATATATACTCCCACCTTCGTTATTTATTCTTCTTTACTATAAACCTTT
CCATTCTCATTCTTTCCTCATTTCNTCC

Query= MSMg01no064_c09.b1 MSMg01no064_c09.b1 CHROMAT_FILE:
MSMg01no064_c09.b1 PHD_FILE: MSMg01no064_c09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:51 2005
         (680 letters)



>mm_chr7_57283570_57284649
          Length = 1080

 Score = 1261 bits (652), Expect = 0.0
 Identities = 673/680 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctacagactaggctatacaagaacaagaccctcttgagagcaattcacggcacaaatacc 60
           |||||||||||||||||||||||||||||  ||||||||||||||||||| | |||||||
Sbjct: 201 ctacagactaggctatacaagaacaagactgtcttgagagcaattcacgggaaaaatacc 260

                                                                       
Query: 61  ttaaggtttaatcaactcaggttcaggatatctcagataacatcatcagtgtgggcttcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaaggtttaatcaactcaggttcaggatatctcagataacatcatcagtgtgggcttcc 320

                                                                       
Query: 121 ttaatcaggacataaggccaagatcctgggagatgaagggaggtaatagttgaacttcag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttaatcaggacataaggccaagatcctgggagatgaagggaggtaatagttgaacttcag 380

                                                                       
Query: 181 cagggttattggcattctggaccaggtcactcttatttcttaggggccttcttgtgatct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagggttattggcattctggaccaggtcactcttatttcttaggggccttcttgtgatct 440

                                                                       
Query: 241 gtgtgttaccagtagctgtggatattactcactgtgtgccagaaccatcccccacaggta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtgtgttaccagtagctgtggatattactcactgtgtgccagaaccatcccccacaggta 500

                                                                       
Query: 301 gccaccaaaattatgtctgggtttataacctctgaagggtgaggataaatggctttggct 360
           |||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||
Sbjct: 501 gccaccaaaattatgtctgggcacataacctctgaagggtgaggataaatggctttggct 560

                                                                       
Query: 361 ctgagccatcacacagtgaagtctccctgtgccagtgtggagcgtgaggtcagttccgag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctgagccatcacacagtgaagtctccctgtgccagtgtggagcgtgaggtcagttccgag 620

                                                                       
Query: 421 ggctccactatactgtgactgttcatacaatgggtcaatcccagagcaccggactgaata 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggctccactatactgtgactgttcatacaatgggtcaatcccagagcaccggactgaata 680

                                                                       
Query: 481 aacaccagttttgtaggagaaactaagagtgcttggaatggaggagaaacagtttgcagg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aacaccagttttgtaggagaaactaagagtgcttggaatggaggagaaacagtttgcagg 740

                                                                       
Query: 541 aaggggtgttaggaatggatccctgttggagagggacaaccctctttttattctagcttt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aaggggtgttaggaatggatccctgttggagagggacaaccctctttttattctagcttt 800

                                                                       
Query: 601 tcagactggaactccttccttcccctctttcctttctctcttctgggattcatgtaactt 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tcagactggaactccttccttcccctctttcctttctctcttctgggattcatgtaactt 860

                               
Query: 661 cctacccagtattttttaat 680
           ||||||||||||||||||||
Sbjct: 861 cctacccagtattttttaat 880


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 680
Length of database: 1080
Length adjustment: 10
Effective length of query: 670
Effective length of database: 1070
Effective search space:   716900
Effective search space used:   716900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no064_c09.g1 MSMg01no064_c09.g1 CHROMAT_FILE:
MSMg01no064_c09.g1 PHD_FILE: MSMg01no064_c09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:51 2005
         (392 letters)



>mm_chr7_57446024_57446815
          Length = 792

 Score =  683 bits (353), Expect = 0.0
 Identities = 374/381 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgagataattgagactgagtccagcgcctcacatcagtcccgcatagtctctgacattca 60
           |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct: 721 tgagataattgagactgagtccagtgcctcacatcagtcccgcatagtctctgacattta 662

                                                                       
Query: 61  caacagacacaaaaataactaatgagtgatgtctctactcgctccacggtctaggaactc 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gaacagacacaaaaataactaatgagtgatgtctctactcgctccacggtctaggaactc 602

                                                                       
Query: 121 cttccctgcactgggagcaaagagtgttaacttcaagactttcaatgaagtgacacttca 180
           ||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 601 cttccctgcactgggagcagagagtgttaactttaagactttcaatgaagtgatacttca 542

                                                                       
Query: 181 aagaccacacaagtatgaggccaagctcagtaagcgtctgtgagccatccccaacatggc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aagaccacacaagtatgaggccaagctcagtaagcgtctgtgagccatccccaacatggc 482

                                                                       
Query: 241 cacactgtctttgtcttgacacacagagagttactacgaagctttgctttcaaagattca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cacactgtctttgtcttgacacacagagagttactacgaagctttgctttcaaagattca 422

                                                                       
Query: 301 ctaaatttagttctatccatttctgcttgctttataatatttatactgttcttgctgttg 360
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 421 ctaaatttagttctatccatttctgcttgctttaaaatatttatactgttcttgctgttg 362

                                
Query: 361 ttttggttttgtttgttttga 381
           |||||||||||||||||||||
Sbjct: 361 ttttggttttgtttgttttga 341


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 392
Length of database: 792
Length adjustment: 9
Effective length of query: 383
Effective length of database: 783
Effective search space:   299889
Effective search space used:   299889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)