Query= MSMg01no065_d03.b1 MSMg01no065_d03.b1 CHROMAT_FILE:
MSMg01no065_d03.b1 PHD_FILE: MSMg01no065_d03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:10:38 2005
(248 letters)
>mm_chr7_29554197_29554846
Length = 650
Score = 456 bits (236), Expect = e-133
Identities = 246/250 (98%), Gaps = 2/250 (0%)
Strand = Plus / Plus
Query: 1 tgagttccatgtaccaggcgctcacaagtgactataactccagtcccaggggatctgact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgagttccatgtaccaggcgctcacaagtgactataactccagtcccaggggatctgact 260
Query: 61 ctatggagacttgcacacacatgcacatattctcataactaaaataaactaaagagaatg 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 261 ctatggagacttgcacacacatgcacatattcacataactaaaataaactaaagagaatg 320
Query: 121 atgtaggtctgtgaaacattgtgcactatcttactctggcaagacccagttctataataa 180
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 321 atgtaggtctgtgaaacattgtgcagtatcttactctggcaagacccagttctataataa 380
Query: 181 tgagcaaatgcgcaaaacctcacgccgagaaaccacgtag--ttatctctgtttaactgt 238
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 381 tgagcaaatgcgcaaaacctcacgccgagaaaccacgtagagttatctctgtttaactgt 440
Query: 239 tgcttggttt 248
||||||||||
Sbjct: 441 tgcttggttt 450
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 650
Length adjustment: 9
Effective length of query: 239
Effective length of database: 641
Effective search space: 153199
Effective search space used: 153199
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no065_d03.g1 MSMg01no065_d03.g1 CHROMAT_FILE:
MSMg01no065_d03.g1 PHD_FILE: MSMg01no065_d03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:10:38 2005
(131 letters)
>mm_chr7_29697488_29698018
Length = 531
Score = 238 bits (123), Expect = 1e-67
Identities = 129/131 (98%)
Strand = Plus / Minus
Query: 1 tgttgtattggaaaactagtgaggggagttagatagatcaggcctgttaagcaagctgta 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 331 tgttgtattggaaaactagtgaggggagttagagagatcaggcctgttaagcaagctgta 272
Query: 61 gctgttgttgcagcagtaggatcaggtgttttagggagggaaacatggatgttcttcaac 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 271 gctgttgttgcagcagtaggatcaggtgttctagggagggaaacatggatgttcttcaac 212
Query: 121 acacacacaca 131
|||||||||||
Sbjct: 211 acacacacaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 131
Length of database: 531
Length adjustment: 8
Effective length of query: 123
Effective length of database: 523
Effective search space: 64329
Effective search space used: 64329
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
