Query= MSMg01no067_c11.b1 MSMg01no067_c11.b1 CHROMAT_FILE:
MSMg01no067_c11.b1 PHD_FILE: MSMg01no067_c11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:13:11 2005
(307 letters)
>mm_chr7_117974519_117975226
Length = 708
Score = 538 bits (278), Expect = e-157
Identities = 298/305 (97%), Gaps = 1/305 (0%)
Strand = Plus / Minus
Query: 4 ggaattctcttgcctccca-aaattccagncgctcttggtttcatagctaacgtaacagt 62
|||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 508 ggaattctcttgcctcttataaattccagtcgctcttggtttcatagctaacgtaacagt 449
Query: 63 attaagagtagaatctctattcagcctctagctcctcctctgtggctcccggggcaggag 122
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 attaagagtagaatgtctattcagcctctagctcctcctctgtggctcccggggcaggag 389
Query: 123 ctgttccttgcagttctgtgtcatggctgaaatactgtgctttgcatccagcagcttgtt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 ctgttccttgcagttctgtgtcatggctgaaatactgtgctttgcatccagcagcttgtt 329
Query: 183 ctggatgataaaacctgttgaagaggcgccatcctttgcatggccagggctaagcctttc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 ctggatgataaaacctgttgaagaggcgccatcctttgcatggccagggctaagcctttc 269
Query: 243 ctaaattgtatttactctccattatttcatattatactcagtttacaaggaagagacctt 302
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 268 ctaaattgtatttactctccattatttcataaaatactcagtttacaaggaagagacctt 209
Query: 303 gggga 307
|||||
Sbjct: 208 gggga 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 307
Length of database: 708
Length adjustment: 9
Effective length of query: 298
Effective length of database: 699
Effective search space: 208302
Effective search space used: 208302
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no067_c11.g1 MSMg01no067_c11.g1 CHROMAT_FILE:
MSMg01no067_c11.g1 PHD_FILE: MSMg01no067_c11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:13:11 2005
(285 letters)
>mm_chr7_117801515_117802198
Length = 684
Score = 501 bits (259), Expect = e-146
Identities = 280/287 (97%), Gaps = 5/287 (1%)
Strand = Plus / Plus
Query: 1 attgagcttgctatgtttccccgactcctgagagcagttgtttgggacagtggtggggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attgagcttgctatgtttccccgactcctgagagcagttgtttgggacagtggtggggtg 260
Query: 61 acctttcagaggcagtgaaggttggttagagcaccttacagtgttggagcactgtcctct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acctttcagaggcagtgaaggttggttagagcaccttacagtgttggagcactgtcctct 320
Query: 121 aggatgtaacatatgttctaaattagactcctgcacattgctctatttcccatcaccagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggatgtaacatatgttctaaattagactcctgcacattgctctatttcccatcaccagt 380
Query: 181 ttttatgggtccaagaatcaaagacagagatg-tgagt-ttttttttttttaaactattg 238
|||||||||||||||||||||||||||||| | ||||| |||||||||||||| ||||||
Sbjct: 381 ttttatgggtccaagaatcaaagacagaga-gatgagtcttttttttttttaa-ctattg 438
Query: 239 cttttattattccactgggcattcttttttttcttcttgttgccgcc 285
|||||| || ||||||||||||||||||||| |||||||||||||||
Sbjct: 439 cttttagtaatccactgggcattcttttttt-cttcttgttgccgcc 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 684
Length adjustment: 9
Effective length of query: 276
Effective length of database: 675
Effective search space: 186300
Effective search space used: 186300
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
