Query= MSMg01no067_c17.b1 MSMg01no067_c17.b1 CHROMAT_FILE:
MSMg01no067_c17.b1 PHD_FILE: MSMg01no067_c17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:13:12 2005
(273 letters)
>mm_chr7_128136486_128137159
Length = 674
Score = 497 bits (257), Expect = e-145
Identities = 271/277 (97%), Gaps = 4/277 (1%)
Strand = Plus / Minus
Query: 1 ttgatttcctcagccacaccttctgcac-cactggattccaggatcccaaaagctcagct 59
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 312 ttgatttcctcagccacaccttctgcacacactggattccaggatcccaaaagctcagct 253
Query: 60 ctgttgggcctggttaggacctgtacgggaggaagaccacatacgcgc---ttttttttt 116
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 252 ctgttgggcctggttaggacctgtacgggaggaagaccacatacgcgctttttttttttt 193
Query: 117 ttttttttagattagttttcagtccatagactaggctggcctggaattcatgccaatcct 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 ttttttttagattagttttcagtccatagactaggctggcctggaattcatgccaatcct 133
Query: 177 cctgcctcaacctcctgggtaccatcagatctgtcttgttctttcttttctccttccatt 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 cctgcctcaacctcctgggtaccatcagatctgtcttgttctttcttttctccttccatt 73
Query: 237 ttctctttctcttgagatgaattccactgtgcagtca 273
||||| ||||||||||||||||||||||||||||||
Sbjct: 72 ttctcagtctcttgagatgaattccactgtgcagtca 36
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 273
Length of database: 674
Length adjustment: 9
Effective length of query: 264
Effective length of database: 665
Effective search space: 175560
Effective search space used: 175560
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no067_c17.g1 MSMg01no067_c17.g1 CHROMAT_FILE:
MSMg01no067_c17.g1 PHD_FILE: MSMg01no067_c17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:13:12 2005
(286 letters)
>mm_chr7_127977391_127978076
Length = 686
Score = 516 bits (267), Expect = e-151
Identities = 282/287 (98%), Gaps = 2/287 (0%)
Strand = Plus / Plus
Query: 1 ttctgtcctctctttatcgggtgggaaaggatacggtacccccactcacc-cacaaatcc 59
||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||
Sbjct: 201 ttctgtcctctctttatcgggtgggaaaggatacggtacccccacccaacacacaaatcc 260
Query: 60 ctgaaggattccgatgctaccctaattaccagcccctgtgagattcacacaggaagggtt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgaaggattccgatgctaccctaattaccagcccctgtgagattcacacaggaagggtt 320
Query: 120 ggctcatttaaagaaactaaaggaggaagcattgatgcagatgcagaagaaaggccacta 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggctcatttaaagaaactaaaggaggaagcattgatgcagatgcagaagaaaggccacta 380
Query: 180 taaaccaatgacatagtttatccgaatagggcaaccagtgagactggtttataagcgttc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taaaccaatgacatagtttatccgaatagggcaaccagtgagactggtttataagcgttc 440
Query: 240 tattaaaagctcatctccaattgtggaccaatgctagccagctaaga 286
|||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 441 tattaaaagc-catctccaactgtggaccaatgctagccagctaaga 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
