Query= MSMg01no068_k17.b1 MSMg01no068_k17.b1 CHROMAT_FILE:
MSMg01no068_k17.b1 PHD_FILE: MSMg01no068_k17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:15:10 2005
(316 letters)
>mm_chr7_74393322_74394037
Length = 716
Score = 559 bits (289), Expect = e-164
Identities = 304/309 (98%)
Strand = Plus / Minus
Query: 5 gaattcacttccacaactacatctagatatcctcctacccacccaaatttgtgtcttctt 64
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gaattcactcccacaactacatctagatatcctcctacccacccaaatttgtgtcttctt 250
Query: 65 ttttaaaaacaaaacaaaatttacagagtccctttgtggtgtcattgtggaaactgtcct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 ttttaaaaacaaaacaaaatttacagagtccctttgtggtgtcattgtggaaactgtcct 190
Query: 125 ctagtatggcctaccagggatcataacgttaaaggaaactgactctccatctcttagcag 184
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ctagtatggcctactagggatcataacgttaaaggaaactgactctccatctcttagcag 130
Query: 185 ccaatagcttctcagctagggctgggactttgtgtccacttctcccaactccatgctggg 244
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 ccaatagcttctcagctagggctgggactttgtgtccacttctcccaactccatgctgga 70
Query: 245 attctgtctagcttgagcttgcgtgggcttatacattgtacctagtcactgagagagagg 304
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 69 attctgtctagcttgagcttgcgtgggcttatacattgcacctagtcactgagagagagg 10
Query: 305 tgacaggta 313
| |||||||
Sbjct: 9 taacaggta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no068_k17.g1 MSMg01no068_k17.g1 CHROMAT_FILE:
MSMg01no068_k17.g1 PHD_FILE: MSMg01no068_k17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:15:10 2005
(288 letters)
>mm_chr7_74290536_74291221
Length = 686
Score = 507 bits (262), Expect = e-148
Identities = 278/284 (97%), Gaps = 2/284 (0%)
Strand = Plus / Plus
Query: 5 ggctgcaagaaacctctggtgggtgtgtctgggatacagaactgggcatgaagccaggag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ggctgcaagaaacctctggtgggtgtgtctgggatacagaactgggcatgaagccaggag 264
Query: 65 aagggccagccttgcatgccagggagagagagtctgagctggtttgaacatgctgtggca 124
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 265 aagggccagccttgcatgccagggagagag--tctgagctggtttgaacatgctgtggcg 322
Query: 125 cccagtggggagctgcctgtacttttaccacatgttctgtgatttgaagattggtgatct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 cccagtggggagctgcctgtacttttaccacatgttctgtgatttgaagattggtgatct 382
Query: 185 ttccaagcagcgttcccttgaatgtttacacttgaaagtgcaaacaccagcaggacccta 244
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ttccaagcagcgttcccttgaatgtttacacttgaaagtgcaaacaccagcaggaccctg 442
Query: 245 cttgttatacaggaaggcaaagcccccgctcccagaaggccctc 288
||||||| ||||||||||||||||||| ||||||||||||||||
Sbjct: 443 cttgttagacaggaaggcaaagcccccactcccagaaggccctc 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 686
Length adjustment: 9
Effective length of query: 279
Effective length of database: 677
Effective search space: 188883
Effective search space used: 188883
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
