Query= MSMg01no071_p04.b1 MSMg01no071_p04.b1 CHROMAT_FILE:
MSMg01no071_p04.b1 PHD_FILE: MSMg01no071_p04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:19:31 2005
(651 letters)
>mm_chr7_4193353_4194409
Length = 1057
Score = 1189 bits (615), Expect = 0.0
Identities = 641/653 (98%), Gaps = 6/653 (0%)
Strand = Plus / Plus
Query: 5 gaattcttaaccgtagctctcagtacggacgactatgtcctgtccagaggaagcagactc 64
|||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 205 gaattcttaaccgtaggtctcagtacggacgactacgtcctgtccagaggaagcagactc 264
Query: 65 ctggactgactttcatctgccctgacctctgtgacctctttttctataacctccagtctc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctggactgactttcatctgccctgacctctgtgacctctttttctataacctccagtctc 324
Query: 125 acagccccagaattacacaatggagaacctcatcaggatgggggcttcaattttggtcct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 acagccccagaattacacaatggagaacctcatcaggatgggggcttcaattttggtcct 384
Query: 185 tgtgcttcttggcgttcttctgttcgaagctcagcacagccaaaggcagacccaacatgc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgtgcttcttggcgttcttctgttcgaagctcagcacagccaaaggcagacccaacatgc 444
Query: 245 agctgggagagaaagcagtgcttctttcatggaggcagacacccgggaataagtccaagg 304
|||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct: 445 agctgggagagaaagcagtgcttctttcatggtggcagacacctgggaataagtccaagg 504
Query: 305 atctcaggtggttctggaagaaaacatctgggactacaatagggaaccattttcagagaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atctcaggtggttctggaagaaaacatctgggactacaatagggaaccattttcagagaa 564
Query: 365 cattcaggaagaaaacatgatttgagtgtagggaaacacctgggtacttgggtggaaaat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cattcaggaagaaaacatgatttgagtgtagggaaacacctgggtacttgggtggaaaat 624
Query: 425 tcttctatggccaatcatcctgttatcacttcacctagatgtataactttggctgacagt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tcttctatggccaatcatcctgttatcacttcacctagatgtataactttggctgacagt 684
Query: 485 ctcctctctctacccacctccaataatgaggaggggataatcctgtctcatcagtcaggt 544
||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ctcctctgtctccccacctccaataatgaggaggggataatcctgtctcatcagtcaggt 744
Query: 545 ttgagtcctaatcttgtgtatcttctgcc------cccccccacttcctttattatatgc 598
||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 745 ttgagtcctaatcttgtgtatcttctgcctgcccccccccccacttcctttattatatgc 804
Query: 599 taccacattctccacttgcgtcatgagccttcattttctctaatgaaaacaaa 651
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 taccacattctccacttgcgtcatgagccttcattttctctaatgaaaacaaa 857
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1057
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1047
Effective search space: 671127
Effective search space used: 671127
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no071_p04.g1 MSMg01no071_p04.g1 CHROMAT_FILE:
MSMg01no071_p04.g1 PHD_FILE: MSMg01no071_p04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:19:31 2005
(599 letters)
>mm_chr7_4306730_4307728
Length = 999
Score = 516 bits (267), Expect = e-150
Identities = 316/337 (93%), Gaps = 16/337 (4%)
Strand = Plus / Minus
Query: 1 acacctgcattgagtggccaacaaggagtcacaccattagtgtagtctgatcactggact 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 332 acacctgcattgagtggccaacaaggagtcacaccattagtgtagtctgctcactggact 273
Query: 61 tgttctggttccctgcaggactgccatagagtgattgacagtaaggaagatcagctgagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 tgttctggttccctgcaggactgccatagagtgattgacagtaaggaagatcagctgagt 213
Query: 121 gtcctctctcttttctttccttcctttttcccttttccctttttttcccatttt-ccctt 179
||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||
Sbjct: 212 gtcctctctcttttctttccttcctttttcccttttccc-ttttttccc-ttttcccctt 155
Query: 180 ttttcccgtttccccttttttcccc-ctttcccccctttttcccctttttttcctttttt 238
||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 154 ttttcccgtttccccttttttcccctttttcccccctttt--ccctttttttcctttttt 97
Query: 239 ccctttccccttttttcccattttcccccttttccccgtttccccc--ttttcc-----c 291
|||||||||||||||||||||||| ||| ||||||||||||||||| |||||| |
Sbjct: 96 ccctttccccttttttcccatttt-ccctttttccccgtttcccccctttttcccctttc 38
Query: 292 ccccc--tttccccctttttcccttttcccccctttt 326
||||| |||||||| ||||||| |||||||||||||
Sbjct: 37 ccccctttttccccccttttcccctttcccccctttt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 149
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 999
Length adjustment: 10
Effective length of query: 589
Effective length of database: 989
Effective search space: 582521
Effective search space used: 582521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
