Query= MSMg01no072_o22.b1 MSMg01no072_o22.b1 CHROMAT_FILE:
MSMg01no072_o22.b1 PHD_FILE: MSMg01no072_o22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:20:50 2005
(654 letters)
>mm_chr7_102548248_102549301
Length = 1054
Score = 1149 bits (594), Expect = 0.0
Identities = 638/656 (97%), Gaps = 6/656 (0%)
Strand = Plus / Plus
Query: 5 ggaattctctactccattgtccttggtccggtcacagattttgttggttggcaattttac 64
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 205 ggaattctctactccattgtccttggtccggtcacagattttgttggttggcaattttgc 264
Query: 65 attagctccctaattactgatcactctcagaggatttttctagacaaacacacacctgac 124
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 attagctccctaattgctgatcactctcagaggatttttctagacaaacacacacctgac 324
Query: 125 caagggagaattcaactcatttccaatatttctgaatgccccctgctccactacttccct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 caagggagaattcaactcatttccaatatttctgaatgccccctgctccactacttccct 384
Query: 185 cctataccagggcctgtggtttttccacatcaggaggaaggaactgtataaactgggaca 244
|||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 385 cctataccagggcccgtggtttttccacatcaggaggaaggaactgtagaaactggggca 444
Query: 245 ttagcaatatgtttgttttacagccttccgtagtcttgcttttagctcaggtttagtatt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttagcaatatgtttgttttacagccttccgtagtcttgcttttagctcaggtttagtatt 504
Query: 305 tatttcaggttacagtagcatatggttttgtacatgtcttttgcgaaatgattcctgagg 364
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 505 tatttcaggttacagtagcatatggttttgtacatgtcttttgcggaatgattcctgagg 564
Query: 365 ttttaaaactattatactgtacatttttctattatattggtccctccaaagtcttgtatt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttttaaaactattatactgtacatttttctattatattggtccctccaaagtcttgtatt 624
Query: 425 ttccataaatcccattcatttgtccttattcatagcttcacgtcctatcctttgtttttc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ttccataaatcccattcatttgtccttattcatagcttcacgtcctatcctttgtttttc 684
Query: 485 tgtttagaggtaatcttagttttcaaaatgttcagaattgtagaggagtccagcaactcc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tgtttagaggtaatcttagttttcaaaatgttcagaattgtagaggagtccagcaactcc 744
Query: 545 aatgagagatgtccattgtaaaacttagcacaatctgtgtgtgtgtgtgtctctctctct 604
|||||||||||||||||||||||||||||||||||||||||||||||||| | | | | |
Sbjct: 745 aatgagagatgtccattgtaaaacttagcacaatctgtgtgtgtgtgtgtgtgtgtgtgt 804
Query: 605 ct------ctctctctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 654
| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 gtgtgtgtctctctctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 860
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 72
Number of extensions: 24
Number of successful extensions: 24
Number of sequences better than 10.0: 1
Number of HSP's gapped: 18
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1054
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1044
Effective search space: 672336
Effective search space used: 672336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no072_o22.g1 MSMg01no072_o22.g1 CHROMAT_FILE:
MSMg01no072_o22.g1 PHD_FILE: MSMg01no072_o22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:20:51 2005
(622 letters)
>mm_chr7_102605417_102606438
Length = 1022
Score = 1164 bits (602), Expect = 0.0
Identities = 617/622 (99%)
Strand = Plus / Minus
Query: 1 atatccaatgagtaatctgctaatccaattttcaagttccctatctcttattattaatat 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 822 atatccaatgagtaatctgctaatccagttttcaagttccctatctcttattattaatat 763
Query: 61 ttattggagtaaattcatttaaaaactattaagtcaacactaactttttctttgctttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 ttattggagtaaattcatttaaaaactattaagtcaacactaactttttctttgctttct 703
Query: 121 tacattgatccaaatgcccagtattatgaatgcacactaattatgtgcagtataggcatc 180
||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 702 tacattgatccaaatacccagtattatgaatgcacactaattatgtgcagaataggcatc 643
Query: 181 caaatgcctttttccctttcctggagccctgtgagtagtgctatcatttctcttttatat 240
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 caaatgcctttttccccttcctggagccctgtgagtagtgctatcatttctcttttatat 583
Query: 241 ataaagaaatgaaaacttgaagatctttggcaatttgcctaaaaccacttgagtaagcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 582 ataaagaaatgaaaacttgaagatctttggcaatttgcctaaaaccacttgagtaggcag 523
Query: 301 aaagaaacatttagtttacttccatatttctagctacccaagtcagattttaaaatagtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 aaagaaacatttagtttacttccatatttctagctacccaagtcagattttaaaatagtc 463
Query: 361 acataaaagatgtagaaagagaaaattaatcctttatctttagcactattcaggttttag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 acataaaagatgtagaaagagaaaattaatcctttatctttagcactattcaggttttag 403
Query: 421 gatttagaaataatggccactaaatacaactttataggtggcaaagcttccaggaaacaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 gatttagaaataatggccactaaatacaactttataggtggcaaagcttccaggaaacaa 343
Query: 481 aaccacacttcttgaatgttctccagaggtaagtacttaaaaattatggtattgtttttc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 aaccacacttcttgaatgttctccagaggtaagtacttaaaaattatggtattgtttttc 283
Query: 541 aaataaaatataatgacatatataattttatagaaatactattcatggatatatgcacat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 aaataaaatataatgacatatataattttatagaaatactattcatggatatatgcacat 223
Query: 601 gcatgttcactgctatattatt 622
||||||||||||||||||||||
Sbjct: 222 gcatgttcactgctatattatt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1022
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1012
Effective search space: 619344
Effective search space used: 619344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
