Query= MSMg01no073_j19.b1 MSMg01no073_j19.b1 CHROMAT_FILE:
MSMg01no073_j19.b1 PHD_FILE: MSMg01no073_j19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:21:44 2005
(425 letters)
>mm_chr7_136951330_136952156
Length = 827
Score = 752 bits (389), Expect = 0.0
Identities = 412/421 (97%), Gaps = 4/421 (0%)
Strand = Plus / Minus
Query: 4 gaattctgcattc---tatcttttcttttccccctttgtcattctatgttttgaagggaa 60
||||||||||||| | | |||||||||||||||||||||||||||| |||||||||||
Sbjct: 623 gaattctgcattcacat-ttttttcttttccccctttgtcattctatgctttgaagggaa 565
Query: 61 tccttcattgctttttgatgtcctttgcagtcttcgtgtccagttgccatatctttgaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tccttcattgctttttgatgtcctttgcagtcttcgtgtccagttgccatatctttgaga 505
Query: 121 atttcatacattttatttgagccatactgacttatccctcaaatacccatgcacctttga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 atttcatacattttatttgagccatactgacttatccctcaaatacccatgcacctttga 445
Query: 181 gtcttaatattggatcttgaacactgtggataatctactgtagaaatcctagattcagtt 240
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gtcttaataatggatcttgaacactgtggataatctactgtagaaatcctagattcagtt 385
Query: 241 gccctcttttatagagagtagtcttttctctgaaggttattcagttactcgtccctgtgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gccctcttttatagagagtagtcttttctctgaaggttattcagttactcgtccctgtgg 325
Query: 301 actttgtgaacgaggtttttataatttattaagtggggttaattttggatgccttcttca 360
|||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 324 actttgtgaacgaggtttttataatttattaagtggggttcattttggatgtcttcttca 265
Query: 361 ctcttgggcatggtctttattcctaaggatggcctttttgaaatttcagtaaaaaaaaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctcttgggcatggtctttattcctaaggatggcctttttgaaatttcagtaaaaaaaaaa 205
Query: 421 a 421
|
Sbjct: 204 a 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 425
Length of database: 827
Length adjustment: 9
Effective length of query: 416
Effective length of database: 818
Effective search space: 340288
Effective search space used: 340288
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no073_j19.g1 MSMg01no073_j19.g1 CHROMAT_FILE:
MSMg01no073_j19.g1 PHD_FILE: MSMg01no073_j19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:21:44 2005
(371 letters)
>mm_chr7_136807898_136808668
Length = 771
Score = 650 bits (336), Expect = 0.0
Identities = 357/364 (98%)
Strand = Plus / Plus
Query: 1 actcctttttaacctgtaaaggaggaagatgggaggaagggtcctgaaagcaaaaaagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actcctttttaacctgtaaaggaggaagatgggaggaagggtcctgaaagcaaaaaagag 260
Query: 61 aggtcattagctggccatggacttaaccaagaccctaacaggagcaaacagaagggcttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggtcattagctggccatggacttaaccaagaccctaacaggagcaaacagaagggcttc 320
Query: 121 ctccctgcagggacccctgcctatccacagcagcttggcgagctcaggctgatgtgggac 180
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctccctgcagggacccctgcctgtccacagcagcttggcgagctcaggctgatgtgggac 380
Query: 181 tccaggccatgctgaggggtaaagacattcccttctttctcagagacaagtagtgaaaac 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tccaggccatgccgaggggtaaagacattcccttctttctcagagacaagtagtgaaaac 440
Query: 241 ccctaattgcatggaatttgtgctgaattcagtgcctttacacaccacagtattctgcct 300
|||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||
Sbjct: 441 ccctaattgcatggaatttgtgttgaattcggtgtctttacacaccacagtattctgcct 500
Query: 301 cagggtcaatccacatactttttcatccattctattaaaatgcacagccaggtgtggtgg 360
||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 501 cagggtcaatccacatactttttcatccattctataaaaatgcagagccaggtgtggtgg 560
Query: 361 taca 364
||||
Sbjct: 561 taca 564
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 771
Length adjustment: 9
Effective length of query: 362
Effective length of database: 762
Effective search space: 275844
Effective search space used: 275844
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
