Query= MSMg01no073_p09.b1 MSMg01no073_p09.b1 CHROMAT_FILE:
MSMg01no073_p09.b1 PHD_FILE: MSMg01no073_p09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:22:11 2005
(135 letters)
>mm_chr7_116180623_116181156
Length = 534
Score = 246 bits (127), Expect = 5e-70
Identities = 133/135 (98%), Gaps = 1/135 (0%)
Strand = Plus / Minus
Query: 1 aaatttaaggaattctgtgaagctggatagtctttagagttctattgtgcctggcatgcc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 334 aaatttaaggaattctgtgaagctggatagtctttagagttctattgtgcctggcatg-c 276
Query: 61 ctatgatgccagaagatagtttggaccactcaggagcgtactgccctggttgtcatcagg 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 275 ctatgatgccagaagatagtttggaccactcaggagcgtactgccctggctgtcatcagg 216
Query: 121 tctgagaccacacta 135
|||||||||||||||
Sbjct: 215 tctgagaccacacta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 135
Length of database: 534
Length adjustment: 8
Effective length of query: 127
Effective length of database: 526
Effective search space: 66802
Effective search space used: 66802
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no073_p09.g1 MSMg01no073_p09.g1 CHROMAT_FILE:
MSMg01no073_p09.g1 PHD_FILE: MSMg01no073_p09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:22:11 2005
(312 letters)
>mm_chr7_116067951_116068662
Length = 712
Score = 580 bits (300), Expect = e-170
Identities = 309/312 (99%)
Strand = Plus / Plus
Query: 1 cagatcccatgaccttttgtactttatggcttctatttgctctttaaaatgcttcagatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagatcccatgaccttttgtactttatggcttctatttgctctttaaaatgcttcagatc 260
Query: 61 ctgccttaccgaaggagcgattctgaagcagaacttcagccccaagctcaaggtgccctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgccttaccgaaggagcgattctgaagcagaacttcagccccaagctcaaggtgccctc 320
Query: 121 tgttttcaacatgtcgaataagaactgcaaactgagagtcacctcttcatggttctctgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgttttcaacatgtcgaataagaactgcaaactgagagtcacctcttcatggttctctgg 380
Query: 181 atccaccagctttgccacttctttgtgtgtggcctctccctgctgactctggccctcctt 240
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 381 atccaccagctttgccacttctttgtgtgtggcctctccctgctgactctggtcctcctt 440
Query: 241 cattaggaaggacatggcatagaaaaattcctggaagctgatgtggcgaaagctgtagaa 300
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cacaaggaaggacatggcatagaaaaattcctggaagctgatgtggcgaaagctgtagaa 500
Query: 301 tttcttgatgcc 312
||||||||||||
Sbjct: 501 tttcttgatgcc 512
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 312
Length of database: 712
Length adjustment: 9
Effective length of query: 303
Effective length of database: 703
Effective search space: 213009
Effective search space used: 213009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
