Query= MSMg01no073_p21.b1 MSMg01no073_p21.b1 CHROMAT_FILE:
MSMg01no073_p21.b1 PHD_FILE: MSMg01no073_p21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:22:13 2005
(655 letters)
>mm_chr7_151701826_151702881
Length = 1056
Score = 955 bits (494), Expect = 0.0
Identities = 497/498 (99%), Gaps = 1/498 (0%)
Strand = Plus / Minus
Query: 158 ttactgaatgttgagctcacacgttgtctacactggcagggcagtgagtgccaaggttcc 217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1056 ttactgaatgttgagctcacacgttgtctacactggcagggcagtgagtgccaaggttcc 997
Query: 218 tgctgggtctgcctccacagtgctcgggctaaaagcatgtgctgctgcaccaagccctgt 277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 996 tgctgggtctgcctccacagtgctcgggctaaaagcatgtgctgctgcaccaagccctgt 937
Query: 278 taaaaaaatgtcagtactagggactgaacacgggttctcatgcttgcacaacaggcactc 337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 936 taaaaaaatgtcagtactagggactgaacacgggttctcatgcttgcacaacaggcactc 877
Query: 338 tgctcgcagaactgtctcccctttgttctgtttcattggaagccagttgcttctttcagt 397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 876 tgctcgcagaactgtctcccctttgttctgtttcattggaagccagttgcttctttcagt 817
Query: 398 cttttcactaac-aagcagtaagaacttgctggcagttgctgaactgtgcacccaacagc 456
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 cttttcactaactaagcagtaagaacttgctggcagttgctgaactgtgcacccaacagc 757
Query: 457 actagaagtcagaggtgataggagccagccatcaccctcttccttgtgtgctctcaggtt 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 actagaagtcagaggtgataggagccagccatcaccctcttccttgtgtgctctcaggtt 697
Query: 517 attgaactaaccaaaaaaacctagtcaggctgcttgaaaggatttattaagggcaaaggg 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 attgaactaaccaaaaaaacctagtcaggctgcttgaaaggatttattaagggcaaaggg 637
Query: 577 cattgcttgaccaaaaataaatgaaaattgttgccatgaagcagtgcttagaatcaggaa 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 cattgcttgaccaaaaataaatgaaaattgttgccatgaagcagtgcttagaatcaggaa 577
Query: 637 ctagggtgaggcctaatg 654
||||||||||||||||||
Sbjct: 576 ctagggtgaggcctaatg 559
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1056
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1046
Effective search space: 674670
Effective search space used: 674670
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no073_p21.g1 MSMg01no073_p21.g1 CHROMAT_FILE:
MSMg01no073_p21.g1 PHD_FILE: MSMg01no073_p21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:22:13 2005
(633 letters)
>mm_chr7_151645258_151646290
Length = 1033
Score = 1197 bits (619), Expect = 0.0
Identities = 632/641 (98%), Gaps = 8/641 (1%)
Strand = Plus / Plus
Query: 1 acatgttttcagtttctagagaagacagactacgaatagctcagccattcgtgttcaggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 acatgttttcagtttctagagaagacagactacgaatagctcagccattcgtgttcaggt 252
Query: 61 ttttgacaacagattattctcagg--------tgagccaagggctaacctctcctcaatg 112
|||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 253 ttttgacaacagattattctcaggtgttcacatgagccaagggctaacctctcctcaatg 312
Query: 113 tacagggcctaaggggtcaaacaagatggaacaccctggctaatgtcacccactgctaga 172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 tacagggcctaaggggtcaaacaagatggaacaccctggctaatgtcacccactgctaga 372
Query: 173 gagccagctggtcaatagctgaggtaaactgaagtttttaggagcagtctggtcctgagc 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gagccagctggtcaatagctgaggtaaactgaagtttttaggagcagtctggtcctgagc 432
Query: 233 gtagtcagccacagaaggtggcagtacacaggtacagcacagggtacccagcacagaaga 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gtagtcagccacagaaggtggcagtacacaggtacagcacagggtacccagcacagaaga 492
Query: 293 ccagtcaggcacaaagtgagggtagtgagttctaggggaagctcagaagggcatgtctcc 352
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 493 ccagtcaggcacaaagtgagggtagtgagttctagggcaagctcagaagggcatgtctcc 552
Query: 353 ccagaatggcagcacagggtagcaatgagaactcatcgaaggaaacagaggtcaagacag 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 ccagaatggcagcacagggtagcaatgagaactcatcgaaggaaacagaggtcaagacag 612
Query: 413 gtgagcacaaagaaatttcagtcttagagagtggtgttaggtatggccttgttggaggaa 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 gtgagcacaaagaaatttcagtcttagagagtggtgttaggtatggccttgttggaggaa 672
Query: 473 gtgtgtcacagtgggtgggctttagggtttcaaattctcaagccaggcccagtatcactc 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 gtgtgtcacagtgggtgggctttagggtttcaaattctcaagccaggcccagtatcactc 732
Query: 533 tctctgtctgcagatcaaaatggagaactcccagctaatcttcaggaccatgtctgtctg 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 tctctgtctgcagatcaaaatggagaactcccagctaatcttcaggaccatgtctgtctg 792
Query: 593 tgtgtgctcatgttccctgacatgacgattaatggactaaa 633
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 tgtgtgctcatgttccctgacatgacgattaatggactaaa 833
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1033
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1023
Effective search space: 637329
Effective search space used: 637329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
